| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,642,832 | C→T | 100% | P128L (CCT→CTT) | rimM → | ribosome maturation factor RimM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,642,832 | 0 | C | T | 99.2% | 1146.7 / ‑3.1 | 312 | P128L (CCT→CTT) | rimM | ribosome maturation factor RimM |
| Reads supporting (aligned to +/- strand): ref base C (0/3); new base T (171/138); total (171/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.12e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 312 total aligned reads displayed.
CGCAATCATTAAAGTGCCTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCCTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAGGATTAATAGA > NZ_CP034943/1642698‑1642967 | cGCAATCATTAAAGTGCCTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAATACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAg > 2:375710/1‑140 (MQ=255)cGCAATCATTAAAGTGCCTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAg < 2:6208801/140‑1 (MQ=255) cAATCATTAAAGTGCCTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCt > 1:6233316/1‑140 (MQ=255) cAATCATTAAAGTGCCTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCt > 1:3845062/1‑140 (MQ=255) aaaGTGCCTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGt < 1:3191420/140‑1 (MQ=255) gCCTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTggg > 1:3907743/1‑140 (MQ=255) ccTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTCATGACGTTTGGGt > 1:2129046/1‑140 (MQ=255) ccTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGt > 2:2773739/1‑140 (MQ=255) cTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGtt > 2:3902218/1‑140 (MQ=255) aTTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGa > 2:7647712/1‑140 (MQ=255) tAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGaaaa < 2:6233316/140‑1 (MQ=255) tAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGaaaa < 2:3561675/140‑1 (MQ=255) tAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGaaaa < 2:3845062/140‑1 (MQ=255) agCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGaaa > 2:5862139/1‑140 (MQ=255) agCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGaaa > 1:4550827/1‑140 (MQ=255) agCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGaaa > 1:3008005/1‑140 (MQ=255) agCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGaaa > 1:1178825/1‑140 (MQ=255) gCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGaaaa > 1:6847981/1‑140 (MQ=255) gCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGaaaa > 1:743968/1‑140 (MQ=255) gCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGaaaa > 2:5197703/1‑140 (MQ=255) cTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGaaaaa > 2:1393963/1‑140 (MQ=255) aaTGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGa < 1:6514821/140‑1 (MQ=255) aaTGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGa < 2:7401498/140‑1 (MQ=255) aaTGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGa < 2:1367948/140‑1 (MQ=255) gggAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCAc < 2:4179743/140‑1 (MQ=255) gggAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCAc < 2:7252803/140‑1 (MQ=255) ggAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACt > 2:1697992/1‑140 (MQ=255) ggAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACt > 2:6465319/1‑140 (MQ=255) ggAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACt > 2:505760/1‑140 (MQ=255) gagaATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTc < 2:7496643/140‑1 (MQ=255) gagaATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTc < 2:2404791/140‑1 (MQ=255) gagaATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTc < 2:2984355/140‑1 (MQ=255) aaTTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAAt > 2:6080971/1‑95 (MQ=255) aaTTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCAtt > 2:834743/1‑140 (MQ=255) aaTTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCAtt > 1:3667278/1‑140 (MQ=255) tttATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCt < 2:6700035/140‑1 (MQ=255) tttAGTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCt < 2:3282891/140‑1 (MQ=255) tgatgtgccATGAATTCTTTGGGTGCGACTTATTTACGCAGCACGTTCAAGCCAGGGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCt < 2:3926969/133‑1 (MQ=255) aTGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGaa > 2:7071584/1‑140 (MQ=255) tGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAAt < 1:2510322/140‑1 (MQ=255) tGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAAt < 2:1081625/140‑1 (MQ=255) aaaTCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCa < 1:3341838/140‑1 (MQ=255) aTCATGGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCACAGAAATTTTGACGCTGGGAGCTACTGACGGTTGGGTTCTCTGGCGACAAGGGAAAAAAGACGCTCTCAGTCCTTACCTTGAATCact > 2:4946100/1‑138 (MQ=255) tCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTg < 1:6123433/140‑1 (MQ=255) tCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTg < 1:286595/140‑1 (MQ=255) aTTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGt < 2:2726975/140‑1 (MQ=255) aTTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGt < 1:3299164/140‑1 (MQ=255) ttGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTc < 2:2123440/140‑1 (MQ=255) ttGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTAAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTc < 1:3589775/140‑1 (MQ=255) tGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCa > 2:5602608/1‑140 (MQ=255) gggTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCaa < 1:2660918/140‑1 (MQ=255) gTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTc > 2:2627902/1‑112 (MQ=255) tGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAata > 1:1338522/1‑140 (MQ=255) tGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAata > 1:1858103/1‑140 (MQ=255) cGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAatata > 1:3486128/1‑140 (MQ=255) cGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAatata > 1:7231119/1‑140 (MQ=255) ttACCGAAGACTGTGAACTCATCGGAAAGGTCAAAGTAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTGAAATATATCGATGTc > 1:7383565/1‑140 (MQ=255) ttACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTc > 1:7083482/1‑140 (MQ=255) aCCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGt < 2:5790091/122‑1 (MQ=255) gAAGACGGTGAACTCATCGGAAAGGTCAAAGAACTGTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCga < 1:6714230/140‑1 (MQ=255) gAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCga < 1:7301171/140‑1 (MQ=255) gAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCga < 1:3141782/140‑1 (MQ=255) cacgccGGGGAACTCATCGGAAAGGTCAAAGAAATTGGGACGCTTGGAGCGACTGACGTTTGGGTTATCGGGCGAACAGGGAAAAAAGACGCACTCAGTCCGTACCTTGAATCAGTGGTCAAATATATCGATGTCAGCga < 1:7465326/135‑1 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTAt > 1:5576478/1‑66 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGaaaa > 1:4697571/1‑76 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGaaaa < 2:4697571/76‑1 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCgaaa > 1:4270605/1‑140 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCgaaa > 2:1649501/1‑140 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCgaaa > 2:6858321/1‑140 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCgaaa > 1:4799602/1‑140 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCgaaa > 1:5062931/1‑140 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCgaaa > 2:4347154/1‑140 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCgaaa > 1:5250653/1‑140 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCgaaa > 1:7601108/1‑140 (MQ=255) aGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCAGTCCTTACATTGTCTCAGTGGTCATATATATCGATGTCCGCgaca > 2:5326003/1‑138 (MQ=255) tGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCgaaaagaaaa > 1:3400971/1‑140 (MQ=255) cATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCt > 2:1878991/1‑88 (MQ=255) cATCGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTgaga > 2:124783/1‑140 (MQ=255) cGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTg > 2:2362635/1‑140 (MQ=255) cGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTg > 2:2575749/1‑140 (MQ=255) cGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTg < 2:1002923/140‑1 (MQ=255) cGGAAAGGTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTg < 2:6903012/140‑1 (MQ=255) ggTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCa > 1:5967240/1‑140 (MQ=255) ggTCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCa > 1:5465449/1‑140 (MQ=255) tCAAAGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATg > 2:5132435/1‑140 (MQ=255) aaaGAAATTTTGACGCTTGGAGGTAATGACGTTTGGGTTATCGGGCGACAAGGGAAAAAAGACGCACTCAGTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGa < 1:1124306/140‑1 (MQ=255) aaaGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGa < 1:904685/140‑1 (MQ=255) aaaGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGa < 1:817625/140‑1 (MQ=255) aaaGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGa > 1:1007337/1‑140 (MQ=255) aaaGAAATTTTGACGCCTGGAGCCAATGACGTTTGGGTCATCGGACGAAAAGGAAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTTAAACATATCGATGTCAGGGAAAAGAAAATTGAGATTGAACTCATGGa < 1:4089294/140‑1 (MQ=255) aGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGACTCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAg > 2:5501253/1‑140 (MQ=255) aGAAATTTTGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAg < 1:6998568/140‑1 (MQ=255) ttttGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCa > 2:4858895/1‑80 (MQ=255) ttttGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAGGATTa > 1:5554671/1‑140 (MQ=255) ttttGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAGGATTa > 1:2019572/1‑140 (MQ=255) ttttGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAGGATTa > 1:1585811/1‑140 (MQ=255) tttGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAGGATTaa > 1:5796522/1‑140 (MQ=255) ttGACGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAGGATTAAt < 2:7471083/140‑1 (MQ=255) aCGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAGGATTAATAGa < 1:7649849/140‑1 (MQ=255) aCGCTTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAGGATTAATAGa < 1:4347154/140‑1 (MQ=255) | CGCAATCATTAAAGTGCCTGAAGAAGATTTAGGAGAGCTGAATGAGGGAGAATTTTATTTCCATGAAATCATTGGGTGCGAAGTATTTACCGAAGACGGTGAACTCATCGGAAAGGTCAAAGAAATTTTGACGCCTGGAGCTAATGACGTTTGGGTTATCGGGCGAAAAGGGAAAAAAGACGCACTCATTCCTTACATTGAATCAGTGGTCAAATATATCGATGTCAGCGAAAAGAAAATTGAGATTGAACTCATGGAAGGATTAATAGA > NZ_CP034943/1642698‑1642967 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |