| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,169,199 | C→G | 100% | G81G (GGG→GGC) | EO946_RS10950 ← | class I SAM‑dependent methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,169,199 | 0 | C | G | 97.8% | 1090.3 / 9.8 | 317 | G81G (GGG→GGC) | EO946_RS10950 | class I SAM‑dependent methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (2/5); new base G (162/144); total (164/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 340 total aligned reads displayed.
TTTTCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCCCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTCAGCAGGTTT > NZ_CP034943/2169062‑2169334 | ttttCACTCCCAATCACAGAACACGTTTCAACTAGTGCCATACTTGCGATAATGGCATCCGAACCGAGACCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGGTcgcc < 1:6219193/140‑1 (MQ=255) tttCAATCCCAATCACTGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTGCCCTTCCGATAAACCAGCGGCCCGAAGCATCGGCTCCTGCTcgccc < 2:3600315/140‑1 (MQ=255) tttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgccc < 2:2702326/140‑1 (MQ=255) tttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgccc < 2:7020965/140‑1 (MQ=255) tttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgccc < 2:6811476/140‑1 (MQ=255) tttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgccc < 1:194832/140‑1 (MQ=255) tttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgccc < 2:4561167/140‑1 (MQ=255) tttCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgccc < 2:5513119/140‑1 (MQ=255) tCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATACTCGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATg < 2:4248287/140‑1 (MQ=255) tCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATg < 1:5261820/140‑1 (MQ=255) tCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATg < 1:4913127/140‑1 (MQ=255) tCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATg < 1:6509050/140‑1 (MQ=255) ccAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGaa < 2:4084549/140‑1 (MQ=255) ccAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGaa < 2:115542/140‑1 (MQ=255) ccAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGaa < 2:7465796/140‑1 (MQ=255) ccAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGaa < 2:804048/140‑1 (MQ=255) aTCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCg > 2:1568730/1‑140 (MQ=255) gAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGTTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGc > 1:5085194/1‑140 (MQ=255) aaCCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGct > 1:2960614/1‑140 (MQ=255) aaCCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGct < 1:662370/140‑1 (MQ=255) aaCCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGct < 2:173836/140‑1 (MQ=255) aaCCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGct < 1:407715/140‑1 (MQ=255) cccGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt > 1:3173761/1‑133 (MQ=255) cccGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 2:3173761/133‑1 (MQ=255) gTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt > 2:2134545/1‑130 (MQ=255) gTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGaa < 1:25839/140‑1 (MQ=255) tttCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAAc > 2:517492/1‑140 (MQ=255) ttCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCGTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACa < 2:5913606/140‑1 (MQ=255) tCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACAt < 2:2234149/140‑1 (MQ=255) cTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCt < 1:3586937/140‑1 (MQ=255) aCTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGt > 1:2231570/1‑140 (MQ=255) gCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTAtt > 2:3432349/1‑140 (MQ=255) aTACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCgg > 1:1032625/1‑140 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGaa < 2:1625988/104‑1 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGaa < 2:1332017/104‑1 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGaa > 1:1332017/1‑104 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 2:1529455/109‑1 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGaaa > 1:871973/1‑140 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGaaa > 2:3286384/1‑140 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGaaa > 2:3656375/1‑140 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGaaa > 1:2092580/1‑140 (MQ=255) gCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGaaa > 1:1732368/1‑140 (MQ=255) aTAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACAt > 2:1795770/1‑119 (MQ=255) aTAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACAt < 1:1795770/119‑1 (MQ=255) cATCTGACCCCAACCCGAGGGTGCAATCTAAAAACGTATCCCCTTCAGATAAGCCGGCAGCCCGAAGCATAGGTTCTTTCTCCCCCTGTAAGAAGCGTTTGGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTg < 1:3219768/140‑1 (MQ=255) tCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgcc > 2:966961/1‑83 (MQ=255) tCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt > 2:7145380/1‑97 (MQ=255) tCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 1:7145380/97‑1 (MQ=255) gAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCAcc < 1:517492/140‑1 (MQ=255) gAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGtt < 2:1463566/140‑1 (MQ=255) gAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGtt < 2:2468315/140‑1 (MQ=255) aGCCCGAGTGTACAATCTAAAAACGTGTCCCCTGCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGtt < 1:3901609/88‑1 (MQ=255) acccGAGTGTGCAATCTAAAAACGTATCCCCTTCAGATAAGCCGGCAGCCCGAAGCATAGGTTCTTTCTCCCCCTGTAAGAAGCGTTTGGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTc > 2:1100692/2‑140 (MQ=255) aGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGtata > 2:5278736/1‑140 (MQ=255) aGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGtata < 1:5938337/140‑1 (MQ=255) aGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGGATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGGACCTTGTTTCGtata > 1:7058876/1‑140 (MQ=255) aGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCGGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGtata < 1:1526190/140‑1 (MQ=255) tACAATGTACAAACCTTTCCCCTAACGATAAACCTGCTGCCCGATGCATGGGCTCCTGCTCGCCCCCTAAGAACCCTTTACCTCTGAACATCGCTGTATTCGGATTAAAAAAGAATTACGCACCTTGGTTCGTATaacct < 2:3883828/140‑4 (MQ=255) tACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGt > 2:6365987/1‑140 (MQ=255) tCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCTTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCaaa < 1:7554519/140‑1 (MQ=255) tCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCaaa > 1:7209602/1‑140 (MQ=255) tCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCaaa > 1:3400946/1‑140 (MQ=255) tCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCaaa < 1:6044010/140‑1 (MQ=255) tCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCaaa < 1:4566129/140‑1 (MQ=255) aaaaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCg > 1:965813/1‑140 (MQ=255) aaaaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCg > 1:7275643/1‑140 (MQ=255) aaaaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGAATGAAGCGTTTAGCTCTGAACATCGCTGTATTCTGATGAAAAAAGAATTTGGCACATTGTTTCGTATAAAGTTAAAAcag > 1:5541096/1‑138 (MQ=255) aaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTcgcc > 1:5367270/1‑54 (MQ=255) aaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGct < 2:6607268/140‑1 (MQ=255) aaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGct > 1:3862132/1‑140 (MQ=255) aaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGct > 2:5984002/1‑140 (MQ=255) aaaCGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGct < 2:1260071/140‑1 (MQ=255) aaaCGTGTCCCCGTCCCATAACCCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTAGTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGct < 2:3964147/140‑1 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:4297560/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:4666486/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 1:5776183/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTg > 2:4793962/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGGTTCGTATAAAGTTCAAACCGCTCTTTg > 1:2813460/1‑140 (MQ=255) tgtCCCCTTCCGATAAACCACCTGCCCGAAGCATAGGCTCCTGCTCGCCCCTTATGAAGAGTTTAGCTCTGAACATCGCTGTCTTAGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCtttt > 1:3996780/1‑139 (MQ=255) tCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATACAGTTCAAACCGCTCTTTGcc > 1:1408962/1‑140 (MQ=255) ttCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCa < 1:3092377/140‑1 (MQ=255) ttCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCa < 1:3365760/140‑1 (MQ=255) ttCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCa < 1:1829081/140‑1 (MQ=255) cGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTa < 1:2249617/140‑1 (MQ=255) aCCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAAt > 2:6690649/1‑140 (MQ=255) aCCAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGGATGAAGCGTTTAGCTCTGAACATCGCTGTATGCGGATGAAAAAAGAATTTGGCACCTTGGTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAAt > 2:7400006/1‑140 (MQ=255) ccAGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATc < 2:1367290/140‑1 (MQ=255) aGCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCAc > 2:7552141/1‑140 (MQ=255) gCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGACGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACg > 2:561455/1‑140 (MQ=255) gCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACg > 2:1950646/1‑140 (MQ=255) gCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACg > 2:6090939/1‑140 (MQ=255) gCTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACg > 1:2177269/1‑140 (MQ=255) cTGCCCGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGt > 2:6431155/1‑140 (MQ=255) ccGAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAg < 2:2783490/140‑1 (MQ=255) ccGAAGAATCGGCTCGTGCTCGCCCAGTATGAAGCGTTTAGCTCTGAAAATCGCTGTATTAGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAg < 2:4125026/140‑1 (MQ=255) gAAGCATCGGCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCt < 1:1475604/140‑1 (MQ=255) gcgccTGCTCGCCCCGTATGAAGAGTGTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAAGTTGGCACCTTGTTTCGTATAAAGTACAAACCCCGCTTTGCCCACCACTCGCAAAACACGTTCACCTGACTTcagc < 1:691726/137‑1 (MQ=255) gCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTcagc < 2:4917165/140‑1 (MQ=255) gCTCCTGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTcagc < 2:2848958/140‑1 (MQ=255) tGCTCGCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTCAGCAGGtt > 1:162359/1‑140 (MQ=255) | TTTTCAATCCCAATCACAGAACCCGTTTCACCTACTGCCATACTTGCGATAATGGCATCCGAACCGAGCCCGAGTGTACAATCTAAAAACGTGTCCCCTTCCGATAAACCAGCTGCCCGAAGCATCGGCTCCTGCTCCCCCCGTATGAAGCGTTTAGCTCTGAACATCGCTGTATTCGGATGAAAAAAGAATTTGGCACCTTGTTTCGTATAAAGTTCAAACCGCTCTTTGCCGACCACTAGCAAATCACGTTCAGCTGACTTCAGCAGGTTT > NZ_CP034943/2169062‑2169334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |