| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,237,227 | C→A | 6.0% | intergenic (‑334/+15) | EO946_RS11350 ← / ← aroA | tetratricopeptide repeat protein/3‑phosphoshikimate 1‑carboxyvinyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,237,227 | 0 | C | A | 6.0% | 1065.9 / 15.8 | 401 | intergenic (‑334/+15) | EO946_RS11350/aroA | tetratricopeptide repeat protein/3‑phosphoshikimate 1‑carboxyvinyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (213/146); new base A (34/2); total (252/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.13e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 401 total aligned reads displayed.
GTAAAACAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATACACGAAGCGATACCAAGCATCATT > NZ_CP034943/2237094‑2237365 | gTAAAACAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAATCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAg > 2:6374660/1‑140 (MQ=255)gTAAAACAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAg > 2:238735/1‑140 (MQ=255)gTAAAACAGCCCTCTGACCTGCCGTTGTGTATAAAGCGCATCCCCCCGTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTGTGTTTTTTTGAGTCGGATTATGATTCTCACAGGCATGCTGCCCAAAAAAGCCTGacg > 2:6170661/1‑138 (MQ=255) aaCAGCCCTCTGACCTGTCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTTTTTTATCTCTATAAAACAACCGAAGTTTTTTTTCCGCGGGTTATGATTGTCACAGGCATTGTGCCCAAAAAAAACTGAAGGaaa > 1:2258838/1‑140 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTGTTTTCTCTCTATAAGACAAGCTGTGTTTTTTTTCATCGGATTATGATTATAACAGGCAGTCTGAAAAAAAAATACTGAAGGaaa > 2:6440671/1‑140 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGaaa < 2:5443864/140‑1 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATACAGAATGaaa > 1:4995589/1‑140 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTATATAAGGAAAGCTATGTTTTTTTGCCTAGGATTATAATTCTCAAACGCATTCTGCACAAAAAAAACAGAAGGaaa > 1:868895/1‑140 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTATATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGaaa > 2:2431698/1‑140 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTATTTTGTCTCTATAAGACAAGATATTTTTTTTTGCCTCGGATTATTATTCTCAAAGGCATTCTGCACAAAAAAAAAAGAAGGaaa > 1:5345981/1‑140 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTATTTTCTCTCTATAAGACAAGCGATGTTTTTTTGCCTGGGCTTATGATTGTCACATGCAATCTGCACAAAAAATACAGAAGGaaa > 1:3511514/1‑140 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTGTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGaaa < 1:5862325/140‑1 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTCTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGaaa > 2:5973659/1‑140 (MQ=255) aaCAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCGTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGaaa > 1:1805117/1‑140 (MQ=255) aaCAGCCCTCTGACCTGCAGTTTTGTATAAAGCGCATCCCCCCTTTTAGTTTTTTATTTTCTATCTATAAGACAATCTATGTTTTTTTTCCTCGGATTATGATTCTCAAAGGCATTCTTCACAAAAAATCCTGAAGGaaa > 2:772416/1‑140 (MQ=255) cAGCCCTCTGACCTGCCGTTTTTTATAAAGCGCATCCCCCCTTTTCGTGTTTTGTTTTGTCGAGATAAGACCAGCTTTGTTTTTTTTCCTGGGGTTTTGATTGTGACAGGCGTTCTGGCCAAAAAATCCTGAAGGAAAAt > 1:141224/1‑140 (MQ=255) cAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCGCCTGTTGGTTTTTTCTTTTCTCTGTATAAGACAAGCTATGTTTGTTTGCCTCGGATTCTGATTCTCACAGGGATTCTGCACAATAAATCCTggaggagact > 1:2767219/1‑136 (MQ=255) cAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGGGATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAAt > 1:3549157/1‑140 (MQ=255) cAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAAt > 2:3421963/1‑140 (MQ=255) cAGCCCTCTGACCTGCCGGTTTGTATAAAGCGCATCCCCCCTTGTCGTTTTTTCTTGTCTAGCGATAAGACAATCAATGGTTTGTTGCCTCGGCTTATGAGTCTCCAAGCCATTCAGCACCAAAAATCCTGAGTGAAAAt > 2:7060204/1‑140 (MQ=255) cccTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTGTTTTGTCTCTATAAGACAAGCTCTGTTTTTTTTCCTCGGATTATGATTGTCACAGGCATTATGCACAAAAAATACTGAAGGAAAATCtt > 1:5760286/1‑140 (MQ=255) cccTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTGTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGCTTATGATTATCACAGGCATTATTCACAAAAAATCCTGAAGGaaaagatt > 1:5987236/1‑136 (MQ=255) cccTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACCAGCGATGTTTTTTTTCCTCGGCTTATGATTATCACAGGCATTCTGCACAAAAAATACAGAAGGAAAATCtt > 1:7515937/1‑140 (MQ=255) cccTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTTCCTCGGATTATGGTTGTCACAGGCATTCTGCACAAAAAATACTGAAGGAAAATCtt > 1:3264588/1‑140 (MQ=255) cccTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTGTCAAAGGCATTCTGCACAAAAAATCCTGAATGAAAAtagt > 1:2359377/1‑137 (MQ=255) ctctGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTGTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCa > 2:311390/1‑140 (MQ=255) gACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTGTTTTGTCTCGATAATACAAGCGATTTTTTTTTTCCTCGGATTATGATTCTCAAACGCATTATGCACAAAAAATCCTGAAGGAAAATATTGAGGAt > 1:1280166/1‑140 (MQ=255) gACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGAt < 1:811563/140‑1 (MQ=255) gACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGAt < 1:3927878/140‑1 (MQ=255) ccGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCGCTCTATAAGACCAGCGATTTTTTTTTTCCGCGGCTTATGTATATCACAGGGATTCTGCACAAAAAATGCAGCAGGAAAATCTTGCGGAtttgttt > 1:6467381/1‑140 (MQ=255) ccGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTATTTTCTCTCTATAAGCCAAGGTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCAGTATGCACAAAAAATCCTGATGGAAAATCTTGAGGagtgggtt > 1:3132533/1‑133 (MQ=255) cGTTTTGTACACAGCGCATCCCCCCCTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGATTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGAtttgtttg < 2:7215720/140‑1 (MQ=255) tttGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGaaa < 1:5236255/140‑1 (MQ=255) caggTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAATCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGaaa < 2:6063474/137‑1 (MQ=255) ttGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAg < 2:1811911/140‑1 (MQ=255) tGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGc < 1:2492990/140‑1 (MQ=255) aGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTa > 2:3512943/1‑140 (MQ=255) aTCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTTCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGc > 2:257890/1‑140 (MQ=255) aTCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGc > 2:127975/1‑140 (MQ=255) aTCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGc > 2:7590384/1‑140 (MQ=255) aTCCCCCCTTTTCGTGTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGGCTCGGATTAGGATTGTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTAAGGAGGTGTTTGATATCTTATTTAAATGc > 1:7313035/1‑140 (MQ=255) ttttCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGTATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGaaaaa < 2:5217704/140‑1 (MQ=255) ttCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAgg > 2:6262090/1‑140 (MQ=255) tCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGt < 1:3443496/140‑1 (MQ=255) cGTTTTTTCTTTTCTCTCTATAATACAACCTATGTTTTTTTGCCGCGGATTATGATTATCACAGGCATTCTGCACAAAAAATCCTTAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGtt > 1:1636027/1‑140 (MQ=255) tcttttctCTCTCTAAGACAAGCTATGTTTTTGTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAATATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAg < 2:2645108/140‑1 (MQ=255) cttttctCTCTATAATACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTTCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGa < 1:3639592/140‑1 (MQ=255) cttttctCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGa < 1:1014212/140‑1 (MQ=255) cttttctCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGa < 2:3042278/140‑1 (MQ=255) cttttctCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGa < 1:7430683/140‑1 (MQ=255) tctATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGaa < 1:4664313/140‑1 (MQ=255) aaGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCa > 2:2776585/1‑140 (MQ=255) aaGACAAGCTATGTCTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCa < 2:1090463/140‑1 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACTTGAATGGCAtctgtct > 1:6066720/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGACTGGCAtctgtct > 2:565639/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:1261063/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:3207836/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 2:3773783/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:4427896/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:2592929/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:6268834/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:6288744/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:6332190/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:2093134/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:6781196/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 2:1024287/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:6883843/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:1874369/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGAGTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:472724/1‑140 (MQ=255) gCTATGTTTTTTTGCCTCGGAGTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 1:4102421/1‑140 (MQ=255) gCTATGTTTGTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCAtctgtct > 2:2060414/1‑140 (MQ=255) aTGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCt < 2:6781196/140‑1 (MQ=255) tCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTgg < 1:4250886/140‑1 (MQ=255) ttATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCtt < 2:4726306/140‑1 (MQ=255) ttATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCtt < 2:4995589/140‑1 (MQ=255) ttATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCtt < 2:4170236/140‑1 (MQ=255) ttATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCtt < 1:7668375/140‑1 (MQ=255) ttATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCtt < 1:2996110/140‑1 (MQ=255) ttATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCtt < 2:1312774/140‑1 (MQ=255) ttATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGATTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCtt < 1:7191221/140‑1 (MQ=255) ctcACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTtata > 1:2675059/1‑140 (MQ=255) ctcACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTtata > 1:3337127/1‑140 (MQ=255) ctcACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTtata > 1:4387454/1‑140 (MQ=255) ctcACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTtata > 1:7037175/1‑140 (MQ=255) tcACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATac > 1:5502533/1‑140 (MQ=255) tcACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATac > 1:6617301/1‑140 (MQ=255) cacaGGCATTCTGCACAAAATATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAACAGGTTGGTTAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATaca < 2:1566879/140‑1 (MQ=255) cacaGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATaca < 1:6951618/140‑1 (MQ=255) cacaGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATaca < 2:3189322/140‑1 (MQ=255) cacaGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATaca < 1:2416918/140‑1 (MQ=255) acaGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATacac > 2:3325342/1‑140 (MQ=255) aGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATACACGa > 2:7491251/1‑140 (MQ=255) gCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATACACGAAg < 1:6099200/140‑1 (MQ=255) cATTCGGCACAAAAAATCCTGACGGAAAATCGTCAGGATTTGTTTGAAAGCTTATTTAAATCCTCGAAAAAGGTTGGATAAGAAACCTGAAGGGCATCTGTCTGCTCACTTTCAATTGGCTCTTCAGTTATACACGACGc < 2:229664/140‑1 (MQ=255) aTTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATACACGAAGCg < 2:5324794/140‑1 (MQ=255) tCTGCACAAAAAATCCTGAAGGAAAATCTTCCGGATTTGGTTGAAAGCTTATTTCAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCGTCAGTTATACACGAAGCGAt > 2:3593979/1‑140 (MQ=255) gCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATACACGAAGCGATAcc < 1:6296901/140‑1 (MQ=255) gCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATACACGAAGCGATAcc < 1:1106203/140‑1 (MQ=255) aaaaaTCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCtt > 2:4588698/1‑113 (MQ=255) aaaaaTCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCtt < 1:4588698/113‑1 (MQ=255) | GTAAAACAGCCCTCTGACCTGCCGTTTTGTATAAAGCGCATCCCCCCTTTTCGTTTTTTCTTTTCTCTCTATAAGACAAGCTATGTTTTTTTGCCTCGGATTATGATTCTCACAGGCATTCTGCACAAAAAATCCTGAAGGAAAATCTTCAGGATTTGTTTGAAAGCTTATTTAAATGCTCGAAAAAGGTTGGATAAGAAACGTGAATGGCATCTGTCTGCTCAATTTCAATTGGCTCTTCAGTTATACACGAAGCGATACCAAGCATCATT > NZ_CP034943/2237094‑2237365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |