| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,270,052 | G→C | 14.4% | L43V (CTT→GTT) | prsW ← | glutamic‑type intramembrane protease PrsW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,270,052 | 0 | G | C | 14.4% | 640.9 / 24.4 | 342 | L43V (CTT→GTT) | prsW | glutamic‑type intramembrane protease PrsW |
| Reads supporting (aligned to +/- strand): ref base G (124/146); new base C (2/54); total (130/212) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.19e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 343 total aligned reads displayed.
TAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCT > NZ_CP034943/2269916‑2270190 | tAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTACGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGaac < 2:5134008/140‑1 (MQ=255) cTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTTAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAAcccc < 2:3094509/140‑1 (MQ=255) cTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAAcccc < 2:6574803/140‑1 (MQ=255) cTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAAcccc < 2:2935929/140‑1 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACTAAAAAGCTTCCGCCTCCCACATTATCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACACCTAg > 2:4189799/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGTAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGTGAAATACAAGAACACCCCCTAg > 2:1580682/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGTGAAATACAAGAACAACACCTAg > 2:2637075/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAGTACAAGAACAACCCCTAg > 1:2019482/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAATAAAAACCCCTAg > 2:5569431/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:479384/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 2:1230819/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:1028972/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:919784/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 2:345444/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:4955619/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:378602/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:3628589/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:1918389/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:2413334/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:2789229/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:1351210/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg > 1:3006702/1‑140 (MQ=255) aCCATCACAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCATCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACACGAAAAACCCCTAg > 2:2025773/1‑140 (MQ=255) aaaaaCATTTTAATGATTCCTCCAAAAACCCTGAACATAAAAAAGACACCAAAACGATTCCGCCGCCCCAATTCTATTTTTAAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACACCCCCTAGAAAAAACGAc < 2:6797346/139‑1 (MQ=255) aaCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCg > 2:1026582/1‑140 (MQ=255) aCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATGCAAGAACAACCCCTAGAAAAAACGACCGa > 1:681567/1‑140 (MQ=255) aCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGa > 2:5374895/1‑140 (MQ=255) aCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCGAGAAAAAACGACCGa > 2:5491405/1‑140 (MQ=255) tttttAATTATTACTCCAAAACCCCTTAAGATAAAAAACAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGGTAAATACAACAACAACCCCTAGAAAAAACGACCGAAGc < 2:3795917/139‑1 (MQ=255) aTTTTATTTCTTCCTCCAACAACGCTGAACATAAAAAAGACACCAAAAAGCTTCCGCCTCCCCAATTCTCTTTTTCAACCCCGTAGTGGATAAACTTTGTGGGAAATAACAGAACAACCCGTACAAAACACGACCGAAGc < 1:4501247/140‑1 (MQ=255) aTTTTATTTATTCCTACAAAAACCCTTAAGTTAAAAAAGAAACCAAACAGCTTCCGCCTCCCACATTCTCTTTTTAATTCACTTACTGGATAAACATTGTGGTAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:5266152/140‑1 (MQ=255) aTTTTAATTATTCCTCCAAAAACCCTGAATAAAAAAAATAAACGAAAAAGCTTCCGCCTCCCAAATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:3338107/140‑1 (MQ=255) aTTTTAATTATTCATCCAAAAACCCTGAAGATAAAAAATAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTAAAGCACTTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:6360494/140‑1 (MQ=255) aTTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCAAAATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:7357067/140‑1 (MQ=255) aTTTTAATGATTCCTCCAAAAACACTCAAGATAAAAAACAAACCAAAAAGCTGCCGCCTCCCACATTCTATTTTTCAAGCACGTACTGCATAAACATTGTGTCAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:4411956/140‑1 (MQ=255) aTTTTAATGATTCCACAAAAACCCCTCAATATAAAAAACAAACCAAAACGCTTCCGCCTCCCACATTCTTTTTTTCAAGCCCGTACTGGATAAAAATTGTGGTAAATACACCAACACCCCCCACAAAAAACGACCGAAGc < 1:1662875/140‑1 (MQ=255) ttttAATGATTCCACCAAAAACCCTTAATATAAAAAAGAAACGAAAAAGGTTCCGCCACCCACATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGGTAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCa < 2:1847285/140‑1 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 1:7532587/1‑140 (MQ=255) ttAATTATTCCTCAAAAAACCCTCAATATAAAAAATAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATCCAAGAACAACCCCTACAAAAAACGACCGAAGCAcc < 1:4137891/140‑1 (MQ=255) ttattaTTCCACAAAAAACCCTGAACATAAAAAAGAACCGAAAAAGCTTCCGCCCCCAACATTCTCTTTTTCAAGCACTTACTGGATAAACATTGTGGGAAATACAACACCAACCCCGACAAAAAACGACCGAAGCACCa < 1:7342323/135‑1 (MQ=255) aaTTATTCCTCAAAAACCCCGGAAGATAAAAAAGAAACCAAACAGCTTCCGCCTCCCACTTTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACACGAACAACCCCTAGAAAAAACGACCGAAGCACCat < 2:3237308/140‑1 (MQ=255) aaTTATTCATCAAAAAACCCTGAAGATAAAAAAGAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACTTTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCat < 2:3554578/140‑1 (MQ=255) aaTGATTCCTCCAACAACCCTGAAGATAAAAAATAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCat < 2:4490530/140‑1 (MQ=255) aaTGATTCATCCAAAAACCCTGAAGATAAAAAACAAACGAAAACGCTGCGGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCat < 2:2791854/140‑1 (MQ=255) ttCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTa < 2:1525806/140‑1 (MQ=255) tcctccAAAAACCCTTAATATAAAAAACAAACGAAAAAGATTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTAc < 2:1681360/140‑1 (MQ=255) tcctccAAAAACCCTGAAGATAAAAAAGAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTAc < 2:1266005/140‑1 (MQ=255) tcctaaaaaaaCCCTGAAGATAAAAAAGAAACGAAAAAGGTTCCGCCTCCCACTTGCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTAc < 2:7266691/134‑1 (MQ=255) cctccAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACa > 2:108401/1‑140 (MQ=255) cctccAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACa > 2:2070140/1‑140 (MQ=255) ccAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGt > 1:6706984/1‑140 (MQ=255) cAAAACCCCTGAAGATAAAAAACAAACCAAACAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACGGTATAAACATTGTGGGAAATACAACAACAACCCCCAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:6434752/140‑1 (MQ=255) cAAAACCCCTCAACATAAAAAACAAACCAAACCGCTTCCGCCCCCCACATTCTCTTTTTCACGCACGTACTGGATAAACTTTGTGGTAAATACAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:6978945/140‑1 (MQ=255) cAAAAACCCTTAAGATAAAAATGAAACGAAAACGCTGCCGCTTCCCACTTTATATTTTTCAAGCACGTCCTGTATAAATTTTGTGGTATCTCCAACACCAACCCGTCGAACAAACGACCGAAGCACCATATGTAGAGGtt < 2:627052/140‑1 (MQ=255) cAAAAACCCTGAACATAAAAAAGAAACCAAAAACCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:2663331/140‑1 (MQ=255) cAAAAACCCTCAACATAAAAAACAAACCAAAAAGGTTCCGCCTCCCACATTCTCTTTTACACGCACGTACTGGATAAACTTTGTGGTAAATACAACAACAACCCCAACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:7130630/140‑1 (MQ=255) cAAAAACCATCAAAATAAAAAACACACCAAAAAACTGCCCCCCCCCAAATACTCTTTTACATGCACGTACTGTATAAAAATTGTGGGAAATACACTAACAACCCCTAAAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:5082464/140‑1 (MQ=255) aaaaacCCCTAAACAAAAAAAACAAACCAAAAAGCTTCCGCCTCCCAAATTATATTTTTAAAGCACTTACTGTATAAACATTGTGGTAAATACAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:6283801/139‑1 (MQ=255) aaaaaaCCCTGATTAAAAAAAACAAACGAAAAAGCGGCCGCATCCCAAATTATTTTTTTAAACCACGTTCTGCATAAACATTGTGGTAAATACAAGAACAACCCATCGAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:4286462/139‑1 (MQ=255) aaaaaaCCCTCAATAAAAAAAAAAAACCAAAAAGCTCCCGCCCCCCAAATTATATTTTTAAAGCAGGTACTGGATAAACTTTGTGGTAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:4473859/139‑1 (MQ=255) ccccTTAATATAAAAAAAAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGGCAAATACAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTa < 1:5547597/139‑1 (MQ=255) ccccTCACGATAAACAACAAACGAAAACCCGTCCGCCTCCCACAGACGCTTTTTCACGCAGGTACTGGATAAACTTTGTGGGAAATACACCAACACCCCCTACAAAAAACGACCGACGCACCATATGTACAGGTTCATTa < 1:81774/139‑1 (MQ=255) acacTGAATATAAAAAAGAAACGAAAAAGATTCCGCCTCACACATTCTATTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTa < 2:7589064/137‑1 (MQ=255) tGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCAt > 2:1988792/1‑140 (MQ=255) aaaaGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCtt > 1:5650949/1‑140 (MQ=255) aGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTATta > 1:5134970/1‑140 (MQ=255) aaCGAAAAAGCTTCCGCCTCCCACTTTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaat < 2:855320/140‑1 (MQ=255) aaCGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAAGACAAGAACAACCCCTAGAAAAAACGACAGAAGCACCATAAGTACAGGTTCATTATCATAATGATCTTTtaaat > 1:7647261/1‑140 (MQ=255) caaaaaGCTTCCGCCTCCCAAATTCTCTTTTTAAACCACGTACTGCATAAACTTTGTGGTAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaataaa < 1:720377/139‑1 (MQ=255) aaaaCCTTCCGCCTCCCACATCCTCTTTTTAAAGCACGTACTGCATAAACATTGTGTAAAATACAACACCACCCCCAACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGAACTTTTaaataaaaa < 1:342964/140‑1 (MQ=255) ccGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACACCCCCTAGAAAAAACGACCGAAGCACCATATGGACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTaa > 2:473541/1‑140 (MQ=255) ccaacaTTTTCTTTTACACCCACGTACTTTATAAACAGTGTGGTAAATAAAAGAACAACCCAAACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAACAATAACTTAACAgcgc < 1:2861224/137‑1 (MQ=255) ccaaaaTTCTCTTTTTCAATCACTTACTTTATAAACTTTGTGGGAAATACAATAACAACCCATACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGACCTTTTAAATAAAAATAACTTAACAgcgc < 1:2197243/135‑1 (MQ=255) ttCTCTTTTTCAAGCACTTACTGTATAAACTTTGTGTGAAATACAAGAAAAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGcc < 2:937691/140‑1 (MQ=255) ttttCATGATCGTATTGTAAAAACTTTTTGGTAAATACAACAACACCCCATACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGc < 2:7645080/140‑1 (MQ=255) ttttCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGc > 1:979271/1‑140 (MQ=255) ttttCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGAGGCCGGGAGc < 2:1335422/140‑1 (MQ=255) ttttCAAGAAGGTACTGGATAAACTTTGTGGGAAATCCAAGAAAACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGc < 1:6079011/140‑1 (MQ=255) tCAAGCACGTACTGGATAAACATTGTGGGAAATCCAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGAGGCCGGGAGCAAt < 2:2359762/140‑1 (MQ=255) tCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAt < 2:4570927/140‑1 (MQ=255) tCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAt < 2:1395775/140‑1 (MQ=255) tCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAt < 2:6992782/140‑1 (MQ=255) gCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCt > 1:2336469/1‑140 (MQ=255) aCGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGc > 2:7205709/1‑140 (MQ=255) gTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTCAATAAAAATAACTTAACAGCGCGATGCCGGGAGCACTGCATGCag > 2:1118675/1‑140 (MQ=255) tACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCaga > 2:1344851/1‑140 (MQ=255) tgtaTAAACTTTGTGGGAAATAAAAGAACAACCCATAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAgat < 2:6885841/137‑1 (MQ=255) tGGATAAACAGTGTGGTAAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAgat < 2:6049131/140‑1 (MQ=255) aaCATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGc > 1:4620654/1‑140 (MQ=255) aCATTGTGTGAAATAAAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa < 1:3220704/140‑1 (MQ=255) aCATTGTGGGAAATACCAGAACAACCCCGAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACCGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa < 2:3871333/140‑1 (MQ=255) aCATTGTGGGAAATACAAGAACAACCCCTAGAACACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa < 2:4204367/140‑1 (MQ=255) gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATAGTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAATCAt > 2:4272299/1‑140 (MQ=255) gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 2:5071861/1‑140 (MQ=255) gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt > 1:1440898/1‑140 (MQ=255) aaaTACAAGAACAACCCCTATAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGc < 2:2447875/140‑1 (MQ=255) aaTACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCa > 2:7067595/1‑140 (MQ=255) aacaacaacaACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAAc < 1:6017398/139‑1 (MQ=255) aaGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACctc < 2:6706984/140‑1 (MQ=255) aGACCAACCCCTAGAAAAAACGACAGAAGCACCCTATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACACCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACctct < 1:1752722/140‑1 (MQ=255) | TAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCT > NZ_CP034943/2269916‑2270190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |