| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,387,114 | C→A | 8.2% | V338L (GTA→TTA) | EO946_RS12195 ← | acetyl‑CoA C‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,387,114 | 0 | C | A | 8.2% | 976.6 / 18.9 | 383 | V338L (GTA→TTA) | EO946_RS12195 | acetyl‑CoA C‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (173/160); new base A (43/2); total (220/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.29e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 385 total aligned reads displayed.
AGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAACCCCGGAGCT > NZ_CP034943/2386977‑2387253 | aGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTTATTAGTAAACAAGTGTGATGAGGATTATCGCACCCCTTGCGCCCCTCGGGGGGCCGCGGGCGGGCGGACCCCCCGGTACATTTAAtt > 1:2626959/1‑140 (MQ=255) gCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTc < 1:471351/140‑1 (MQ=255) gCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTc < 2:677901/140‑1 (MQ=255) gCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTc < 1:1991719/140‑1 (MQ=255) gCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTc < 1:5630399/140‑1 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTGTACGTCGTAAACCAGGGTCATGATTATTCGCGCACCGCTTGCGCCGAGCGGGTGGCCGAGGGCGATCGCCCCACCGTTTAACTTTTCTTTTTCa > 2:5616055/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTTATTGGTAAAAAAATTTGATGAGTGTTGTCGCACCGCGTGCGCCGCGCGGGGGGGCGCGGGGGGGCGCACCCCCCGTTACCTTTACtttttga > 1:1109197/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAACAAGTGTCATGAGTATTATCGCACCGCTTGCGCCGATCGGGTGGCCGTGGGCGATCGCAACACCGGTTACATTTACTTTTTCa > 2:3380112/1‑140 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAAAAAGTGTGATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGTTCGCACCACCGGTTACATTTAAtttttaa > 2:6317335/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTAGTAAACAAGTGTGATTAGTATTGTAGCACCGCGGGCGCCGATCGGGTGGGCGCGGGCGGTCGCACCACCGGTTAGATTTAAtttttaa > 1:2470627/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATGCGTAAAAAACTGTGCTGAGTATTATCGCACCCCGTTCGCCGATCGGGGGGCCGAGGGCGCTCCCACCAACGTGTACAATTAAattttaa > 1:4311218/1‑138 (MQ=255) cACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCCCTTGAATTCGTAAACAAGTGTCAGGCGAATGCTCGCACCCCATGCGCCGTTCGGGTGGCCGAGGGCGAACGCACCCCCGGTTGCAGTTACTTTTTCa > 2:3695831/1‑140 (MQ=255) aaCCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTAGTAAAAAAATGTCATGGCTATTGTCGCACCCCATGCGCCCAACTGGTGGCGGCCGTCGGACGGACAACCCGTTACATTTAATTTTTCa > 1:5136415/2‑140 (MQ=255) aCCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTTAACAAGTGTGATTAGTATTATCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTGTACATTTTATTTTTaaa > 2:5374041/1‑140 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTTTCAGGTGTATTATCGCACCGCGTGCGCCGATCGGGTGGCCGAGGGGGATCGCCCCACCGTGTTGAGTTAATTTTTTAAGAtg > 1:7487080/1‑139 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTTATTGGTAAACAAGTGTCATGAGGATTATCGCACCGCGTGCGCCGCTCGGGGGGCCGAGGGCGCTGGCACCCCCGGGTACATTTAATTTTTGAAGAta > 1:1281302/1‑139 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTTATTGGTAAAAAACTGTCATGAGTATTGTCGCACCCCGTGGGCCGCTCGGGTGGGCGCGGGCGCTCGCACCCCCGGGTGCATTTAATTTTTAAatata > 1:777885/1‑139 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAACAAGTGTCATGAGGATTCTCGCACCGCGTGCGCCGCTCGGGGGGCCGCGGGCGCTCGCACCACCGGTTACAGTTACTTTTTCAAGATc > 2:4988944/1‑140 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTAGTAAAAAAGTGTGATGAGTATTGTCGCACCCCGTGCGCCGGGCGGGTGGGCGGGGGCGGTCGGCCCCCCGGTTGCCTTTAATTTTTGAatata > 1:6767204/1‑139 (MQ=255) cTGCAAATGGCGGCAACACCCAGTCACCCTCCCCGTCGCTTTAATTAGTACACAATTGTAATGAGTAGTCTCGCACCCCTTGCGCCCATCCGGTGGCCCCGGGGGAATGCACCACCGAGTACATTTAAATTTTCAAGATc > 2:6444084/1‑140 (MQ=255) aaTGGCGGCAACACCCAGTCCCCCTCCCCGTCGCGTTAATTCGTAAACAAGTGTGATTAGTTTTGTCGCACCGCGTGCGCCGATCGGGTGGCCGGGGGCGCTCGCACCACCGGGTTCATTTACTTTTTGAAGATAGAAAc > 1:3709953/1‑140 (MQ=255) cggcAACACCCCGTCCCCCTCCCCGTCGCGTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACcgacg < 2:4682684/140‑1 (MQ=255) ccccGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGAttttttt < 2:728540/140‑1 (MQ=255) ccAGTCCCCCTCCCCGTCGCTTTAATTCGGAAACAAGTGTCATGAGTATTCTCGCCCCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTGTTCAAGATCGAAACCGACGATTTTTTTa < 2:7084196/140‑1 (MQ=255) ccTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCaa < 2:204668/140‑1 (MQ=255) ccTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCaa < 2:777885/140‑1 (MQ=255) ccTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCaa < 2:3064707/140‑1 (MQ=255) cccGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATAGGGTGGCCGAGGGCGATCGCACCACCGTTTAAATTTAATTTTTCAAGATCGAAACCGACCATTTTTTTAAATGTCaaaaaa > 2:7518830/1‑138 (MQ=255) ccGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAaacaa < 2:3118239/140‑1 (MQ=255) ccGTCGCTTTAAGTCTTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACAGACGATTTTTTTACATGTCAAaacaa < 2:3928442/140‑1 (MQ=255) tCGCTTTAATTCGTAAACAAGTGTGATGAGTATTCTCGCACCGCTTGCGCCCATCCGGTGGCCGAGGGCGATCGCACCACCGTTTAAATTTACTTTTTAAAGATCGCAAACCACGCTTTTTTTACATTTaaaaaaaaaaa > 2:4264511/1‑137 (MQ=255) ttAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCa < 1:7321586/140‑1 (MQ=255) ttAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCa < 2:5518823/140‑1 (MQ=255) tAATTCGTAAAAAAGTGTCATGAGTATTCTCGCACCGCGTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAATATCGAAACCGACGATTTTTTTACATTTCAAAACAAAAGAAGCaa > 2:1634986/1‑140 (MQ=255) tAAGTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCaa < 1:6321239/140‑1 (MQ=255) aTTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAGCCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAAc < 1:6602324/140‑1 (MQ=255) cGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCt < 1:6732063/140‑1 (MQ=255) tAAACAAGTGTCATGAGTATTCTCGCACAGCTTGCGCCGATCGGGTGGCCGCGGGCGATCGCACCACCGGTTACATTTACTGTTTCAAGATCGAACCCGACGATTTTTTTACAGGTCAAAACAACAGCAGCCAACGCGTc > 2:4528099/1‑140 (MQ=255) aTGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCaaa < 2:1109197/140‑1 (MQ=255) aTGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCaaa < 2:1697922/140‑1 (MQ=255) tGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAAc < 1:7092946/140‑1 (MQ=255) tGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAAc < 1:3213630/140‑1 (MQ=255) tGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAAc > 1:5906857/1‑140 (MQ=255) tGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAAc < 1:5455926/140‑1 (MQ=255) tGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAAc < 1:348788/140‑1 (MQ=255) tGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAAc < 1:4474185/140‑1 (MQ=255) aGTATTCTCGCACCGCTTGCGTCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACaa > 1:166094/1‑140 (MQ=255) aGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACaa > 1:7350018/1‑140 (MQ=255) aGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTGTACCGTTACTTTTTCTCGATCGAAACCGACGATTTTTTTACATGTCAAAACAACCGAAGCTAACGCTTCATTTACTTccagcat > 1:281603/1‑134 (MQ=255) tATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGt > 1:226645/1‑140 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCTCACCAACGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATTTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:6040023/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAacaaca > 2:5734730/1‑107 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAAc < 1:6943932/134‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 2:7144364/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa > 2:3602307/1‑140 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 2:6648248/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 1:3376860/140‑1 (MQ=255) ttCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa < 2:6282417/140‑1 (MQ=255) tctcGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCaa > 1:6402879/1‑140 (MQ=255) tctcGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCaa > 1:645439/1‑140 (MQ=255) tctcGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCaa > 2:6045948/1‑140 (MQ=255) ccGCTTGCGCCTATCGGTTGGACGAGTGAGATCTCAAAAACTTTTACATTTAATTTTTCAAGATCTAAACATAAGATTTTTTTACATGTCAAAACAACAGAAGCAAACTTTTAATTTAATTAAATCAAGTCAATATCTTg < 2:2470627/140‑1 (MQ=255) ccGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTc > 2:4626455/1‑131 (MQ=255) ccGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTg < 2:2819864/140‑1 (MQ=255) ccGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTg < 1:6531467/140‑1 (MQ=255) ccGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTg < 2:1363483/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACCTCTAAAAACAACAGAAGCAAACGCTTCATTTACTTCAACCAAGTCAATATATTGGa < 1:2875581/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 1:7184870/140‑1 (MQ=255) gCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa < 1:3519599/140‑1 (MQ=255) cTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGAc > 1:3802095/1‑140 (MQ=255) ttGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAACCCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGTACg > 2:513069/1‑140 (MQ=255) tGCGCCGATCGGGTGGCCTATGTAGATCGCACAACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACgg > 2:6988675/1‑140 (MQ=255) gATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACTCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAAc > 2:935187/1‑140 (MQ=255) gATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCa > 1:4833720/1‑121 (MQ=255) cgtgTGGCCGAGGGAGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAATCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGt < 2:2930842/137‑1 (MQ=255) cGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAAc > 1:5817799/1‑104 (MQ=255) cGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAAc < 2:5817799/104‑1 (MQ=255) ggtctaTCGCACCACCTTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAgg < 1:1452900/135‑1 (MQ=255) gggCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAgg < 1:4279386/140‑1 (MQ=255) gggCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAgg < 1:3124136/140‑1 (MQ=255) ggCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGa > 1:5331856/1‑140 (MQ=255) ggCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGa > 1:6167560/1‑140 (MQ=255) ggCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGa > 1:626134/1‑140 (MQ=255) gCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTTGACGGTTAAACCGTTCTTTTTCAGGAg > 2:3209430/1‑140 (MQ=255) gCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAg > 2:616312/1‑140 (MQ=255) tCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGa > 2:659252/1‑111 (MQ=255) tCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTg > 2:6916691/1‑140 (MQ=255) tCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTg > 2:4800528/1‑140 (MQ=255) tCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTg > 1:366119/1‑140 (MQ=255) ccaccGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTAAAAACAACAGAAGCAAAGGCTTCATTTACTTCAAAAAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTAAGGAGCTTGTTAAt > 1:4558315/1‑140 (MQ=255) caccGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTGTTTTTCAGGAGCTTGTTAAtt > 2:3502317/1‑140 (MQ=255) cGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCa < 1:6988684/140‑1 (MQ=255) cGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCa < 1:7615522/140‑1 (MQ=255) tttAGATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATAGTGGAAGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCaaa > 2:278161/1‑140 (MQ=255) tttACATTTACTTTTTCAAGATCGAAACCGAGGATTTGTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAATCAAGTCAATATCTTGGACGGTTAACCCGTTCTTTTTCAGGAGCTTGTTAATTGCaaa > 2:1528018/1‑140 (MQ=255) tttACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCaaa > 2:5205845/1‑140 (MQ=255) tttACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCaaa > 2:189245/1‑140 (MQ=255) ttACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTGCTTCAAACAAGTCAATATCTTGGACGGTTACACCGTTCTTTTTGAGGAGCTTGTTAATTGCAAAACCCGGa > 1:3926097/1‑140 (MQ=255) tACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAACCCCGGAg < 1:918058/140‑1 (MQ=255) aCTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAACACAACAGAAGCACCCGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAACCCCGGAGc < 1:1854197/140‑1 (MQ=255) | AGCTGCACCGCTGCAAATGGCGGCAACACCCAGTCCCCCTCCCCGTCGCTTTAATTCGTAAACAAGTGTCATGAGTATTCTCGCACCGCTTGCGCCGATCGGGTGGCCGAGGGCGATCGCACCACCGTTTACATTTACTTTTTCAAGATCGAAACCGACGATTTTTTTACATGTCAAAACAACAGAAGCAAACGCTTCATTTACTTCAAACAAGTCAATATCTTGGACGGTTAAACCGTTCTTTTTCAGGAGCTTGTTAATTGCAAACCCCGGAGCT > NZ_CP034943/2386977‑2387253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |