| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 138,085 | C→A | 5.5% | I19I (ATC→ATA) | rpsS → | 30S ribosomal protein S19 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 138,085 | 0 | C | A | 5.5% | 2050.8 / 29.5 | 712 | I19I (ATC→ATA) | rpsS | 30S ribosomal protein S19 |
| Reads supporting (aligned to +/- strand): ref base C (216/437); new base A (52/6); total (269/443) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.22e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 715 total aligned reads displayed.
CGTCGTCGTAAAAATAAATAACGGGGTTGTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCATCTCTGAAGATA > NZ_CP034943/137951‑138224 | cgtcgtcgtAAAAATAAATAACGGGGTTGTATACGGTTCACTTCGGACCGTAGTTCAATCACGAAGGGAGGTTCCAAAATGTCTCGCAGCTTGAAAAAATGAACATTTGTCGATGGACACTTGATGAAAAAAATAGAGaa > 2:1520664/1‑140 (MQ=255) gtcgtcgtAAAAATAAATAACGGGGTTGTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGaaa < 1:4046037/140‑1 (MQ=255) tcgtAAAAATAAATAACGGGGTTGTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTaa > 1:6356692/1‑140 (MQ=255) cgtAAAAATAAATAACGGGGTTGTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTaaa > 1:2393494/1‑140 (MQ=255) aaataaatAACGGTGTTGTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAATAAGGACCATTTTTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGaaa < 2:4548144/140‑1 (MQ=255) aaataaatAACGGGGTTGTCTACGTTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGaaa < 2:583210/140‑1 (MQ=255) aataaataACGGGGTTGTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAAc < 1:127810/140‑1 (MQ=255) aataaataACGGGGTTGTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAAc < 2:5051679/140‑1 (MQ=255) aaataaGGGGGTTTTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGa < 1:6812042/140‑1 (MQ=255) gggTTGTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAAc < 2:7350954/140‑1 (MQ=255) ttCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAAc > 1:5725704/1‑140 (MQ=255) ttCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACATGATTACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTACTaaaaaa > 2:3383202/1‑139 (MQ=255) tCACTTCGGACCGTAGTGCAATCACGAAGGGAGCTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACt < 1:4998811/140‑1 (MQ=255) cACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATGTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGAAAAAACtt > 1:1926413/1‑140 (MQ=255) aCTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATTGCTCGCAGCTTGAAAAAAGTACCATTTTTCGATGGACACTTTATGAAAAAAATAGAGAAAATAAATTAAAAAGAAAAGAAAAAAGTCGTAAAAAcatt > 2:3221200/1‑137 (MQ=255) aCTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTTTCGATGGACACTATATGAGAAAAATAGAGAAATTAAATGAAAGAGACAATAAACAACTCGTAATAAATTg > 2:622827/1‑140 (MQ=255) aCTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTaaa > 2:2483994/1‑107 (MQ=255) aCTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTg > 1:2833497/1‑140 (MQ=255) aCTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTg > 1:1220853/1‑140 (MQ=255) cGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGtct < 2:2342771/140‑1 (MQ=255) gACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCtcg > 1:7032867/1‑140 (MQ=255) gACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCtcg < 2:1089434/140‑1 (MQ=255) gACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCtcg < 1:5602219/140‑1 (MQ=255) gACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCtcg < 2:633265/140‑1 (MQ=255) aCCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGTCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAATCTTGGTCtcgt > 1:2963158/1‑140 (MQ=255) aCCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCtcgt > 1:251710/1‑140 (MQ=255) aCCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTAGCAGCTTGAAAAAAGCACAATTTTTCGATGGAAACTAGAAGACAAAAATAGAGAAATGAAAAAAAACACACCACAAAAAAGTCGAAAAAACATGGTCtagt > 2:4731905/1‑140 (MQ=255) tAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTAGTAAAAACTTGGTATCGTCGtt > 2:588816/1‑140 (MQ=255) aGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTTTCGATGGACACTTGATGACAAAAATAGAGAAATTAAATGAAAAAGACAAGAAAAAAGTCGTAAAAACATTGTCTCTTCGtta > 2:5314658/1‑139 (MQ=255) aGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTc > 1:725130/1‑140 (MQ=255) aGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTc > 1:3439388/1‑140 (MQ=255) aGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTc > 1:1412888/1‑140 (MQ=255) aGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTc > 2:273462/1‑140 (MQ=255) aGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTc > 1:61216/1‑140 (MQ=255) aGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAACAAACAAGTCGTAAAAACTTAGTCTCGTCGtta > 2:4047449/1‑139 (MQ=255) gTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTct < 2:4653508/140‑1 (MQ=255) gCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTctac < 2:6695492/140‑1 (MQ=255) cAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTctact > 1:4800245/1‑140 (MQ=255) tCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACCAGTCGTAAAAACTTGGTCTCGTCGTTCTACTAtt < 2:258155/140‑1 (MQ=255) tCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTAtt > 1:817904/1‑140 (MQ=255) aCGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTAtttt > 1:3304335/1‑140 (MQ=255) aaGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTccc > 1:5510977/1‑140 (MQ=255) aaGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTccc > 1:4439395/1‑140 (MQ=255) aaGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGAAACTTGATGACAAAAATCGAGAAATTAAATAAAACAGACAATAAACAAGTAGTAAAAACTTGGTCTCGTCGTTCTACTAATTTcac > 2:7517243/1‑138 (MQ=255) aGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCca < 2:83295/140‑1 (MQ=255) aGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCca < 2:372849/140‑1 (MQ=255) aGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCca < 2:2811956/140‑1 (MQ=255) aGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCca < 1:4079925/140‑1 (MQ=255) aGGTTCCAAAATGGCTCGAAGCTTGAAAAAAGGACCATTTGTAGATGGACACTTGATTACAAAAATCGAGAAATTAAATGAAACAGACAAGAAAAAATTCGTAAAAACTTGGTCTCTTCGTTATACTAATTTACCACAGt > 2:7162956/1‑140 (MQ=255) gTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGttt < 1:5944415/140‑1 (MQ=255) gTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGCACACTTTATGACAAAAATCGAGAAATTAAATGAAACAGACAATAAACAACTCGTAAAAACTTGGTCTCGTCGTTCTACTAAATTCAAACAGttt > 2:4322933/1‑140 (MQ=255) tCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAAc < 1:5877537/80‑1 (MQ=255) ccACAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACAATTGATGACAAAAATCGAGAAATTAAATGAAACAGACAACAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTAtt < 2:6107837/140‑1 (MQ=255) aaaTGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATTAAAAAAATCGAGAAATTAAATGAAAAAGAAAAGAAACAAGTAGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCACACAGGTTATTGGt > 2:220331/1‑140 (MQ=255) aaaTGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTgtt > 1:6660225/1‑138 (MQ=255) aaaTGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGt < 1:526572/140‑1 (MQ=255) aTGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGCCAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTca < 2:1267922/140‑1 (MQ=255) ggCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTcaca > 2:6844519/1‑140 (MQ=255) gCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTccc < 2:3041713/122‑1 (MQ=255) gCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTCATGACAAAAAAAGAGAAATTAAATTAAACAGACAAGTAAAAAGACGTAAAAACTTAGTCTCGACGTTCTACAATTTTCCCACATTTTATTGGTcacac > 2:5794037/1‑140 (MQ=255) catcTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCTAGAAATTAAATGAAACAGACAACAAACAACTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCg < 2:6013526/137‑1 (MQ=255) cAGCTTGAAAAAAGGCCCATGGGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCg < 2:6529785/140‑1 (MQ=255) cAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCg < 2:3913810/140‑1 (MQ=255) cAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCg < 2:4180508/140‑1 (MQ=255) cAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCg < 1:2144939/140‑1 (MQ=255) cAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCg < 1:1510664/140‑1 (MQ=255) cAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCg < 1:4692505/140‑1 (MQ=255) cAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCg < 1:4367179/140‑1 (MQ=255) aGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAACTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGc < 2:4844820/140‑1 (MQ=255) gCTTGAAAACAGGACCATTTGTCGATGGACACTTGATGCCAAAAATCGAGAAATTAAATGAAACAGACAAGAAAAACGTCGTAAAAACTGGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCa < 1:2271358/140‑1 (MQ=255) gCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACTAAAATCGAGAAATTAAATGAAACAGACAAGAACCAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCa < 2:5170592/140‑1 (MQ=255) gCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCa < 1:103390/140‑1 (MQ=255) aaGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATgac < 1:3198019/140‑1 (MQ=255) aGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGCCCAGACACAAGTCGTAAACACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATgacg < 1:1839676/140‑1 (MQ=255) aGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATgacg < 2:3569439/140‑1 (MQ=255) aGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATgacg < 2:494609/140‑1 (MQ=255) ggACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATTAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATgacgg < 2:5556563/140‑1 (MQ=255) ggACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATgacgg > 1:4227672/1‑140 (MQ=255) ggACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATgacgg > 1:5383628/1‑140 (MQ=255) cATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGt < 1:3654653/140‑1 (MQ=255) cGATGGACACTTGATGACAAAAATCGATAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACg < 2:700740/140‑1 (MQ=255) cGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACg < 2:1360754/140‑1 (MQ=255) agATGTACACTTGATGAAAAAAATCGAGAAATTAAATGAAAAAGACAAGAAACAAGTAGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACATTTTATTGGTCACACAATCTCAGTCTATGACGGACGTAAACACg < 1:7433041/139‑1 (MQ=255) tGGACACTTGATGACAAAACTCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGc < 1:6503470/140‑1 (MQ=255) tGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGc < 2:1944774/140‑1 (MQ=255) cgcacacTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGACACAAGTCGTAAAAACTTGGTATCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGc < 1:2642997/137‑1 (MQ=255) ggACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGcc < 1:484791/140‑1 (MQ=255) ttGATGACAAAAATCGAGAAATTAAATGAAACAGACCAGAAACAACTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCAGAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTAtt < 2:1609403/140‑1 (MQ=255) ttGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTTTTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTAtt < 2:1737235/140‑1 (MQ=255) ttGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTAtt < 2:5670701/140‑1 (MQ=255) atgaCAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCAt < 1:1685619/140‑1 (MQ=255) gaCAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCAtct > 1:3775580/1‑140 (MQ=255) aCAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCAtctc > 1:3077745/1‑140 (MQ=255) cAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCATctct < 1:357118/140‑1 (MQ=255) cAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCATctct < 2:7647665/140‑1 (MQ=255) cAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCATctct < 1:6896502/140‑1 (MQ=255) aaaaTCGAGAAATTAAATGAAACAGACAAGAAACACGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTATATGACGGACGTAAACACGTGCCTGTATTCATCTCTGa < 1:4532307/140‑1 (MQ=255) aaaaTCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCATCTCTGa < 2:2132138/140‑1 (MQ=255) aaaaTCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCATCTCTGa < 1:3503691/140‑1 (MQ=255) aaaTCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCATCTCTGaa > 2:6735541/1‑140 (MQ=255) | CGTCGTCGTAAAAATAAATAACGGGGTTGTCTACGGTTCACTTCGGACCGTAGTGCAATCACGAAGGGAGGTTCCAAAATGGCTCGCAGCTTGAAAAAAGGACCATTTGTCGATGGACACTTGATGACAAAAATCGAGAAATTAAATGAAACAGACAAGAAACAAGTCGTAAAAACTTGGTCTCGTCGTTCTACTATTTTCCCACAGTTTATTGGTCACACAATCGCAGTCTATGACGGACGTAAACACGTGCCTGTATTCATCTCTGAAGATA > NZ_CP034943/137951‑138224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |