| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,812,782 | T→G | 8.0% | K202T (AAG→ACG) | EO946_RS14520 ← | SDR family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,812,782 | 0 | T | G | 8.0% | 906.8 / 7.0 | 429 | K202T (AAG→ACG) | EO946_RS14520 | SDR family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (194/172); new base G (57/2); total (254/175) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.02e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 430 total aligned reads displayed.
CATTGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAGCGC > NZ_CP034943/2812645‑2812920 | cATTGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACCAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTc < 1:3035350/140‑1 (MQ=255)cATTGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTc > 2:1020880/1‑140 (MQ=255)cATTGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTc > 2:5521483/1‑140 (MQ=255)cATTGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTGCTTGCCGATTCGCTTc > 1:2697057/1‑140 (MQ=255)cATTGAGACCTCCGGTGGCTTCAATGACAGGGCCTGTCACAAGGTCTGAGGTCTCCTCACACACGAAAGCGATAATCCGGGCGAGATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTc < 1:5934709/140‑1 (MQ=255) agaCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCATACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc < 2:5206297/140‑1 (MQ=255) agaCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc < 1:6025532/140‑1 (MQ=255) agaCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc < 2:3941304/140‑1 (MQ=255) aCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCtg > 1:562562/1‑139 (MQ=255) ccTCCGGTGGCTTCAATGACAGTGCCTGTCACACGGTCTGAGTGCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTc < 1:3172421/140‑1 (MQ=255) ccTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTc < 1:3349687/140‑1 (MQ=255) ccTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTc < 1:2313365/140‑1 (MQ=255) ccTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGGTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTc < 1:2494800/140‑1 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTACTTGCCGATTGGCGTCCTGGCttgcgg > 1:7086435/1‑136 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTGTTCCTTGCCGATTAGCTTCCTGGCTTCctc > 1:7485140/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCGTGCCGATTCCCGTCCGGGCGTCcta > 1:6852910/1‑139 (MQ=255) gCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCGTCCTCTATTgt > 2:3856172/1‑139 (MQ=255) gCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTTGCCGATTCGCTTCCTGGGTGCCGCGATTgt > 1:5126335/1‑139 (MQ=255) ttCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATg < 2:6811284/140‑1 (MQ=255) ttCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATg < 1:6584205/140‑1 (MQ=255) ttCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTGCTTGCCGAGTGGCTTCCTGGCTTCCTCgatggatg > 1:6916119/1‑140 (MQ=255) tCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGc < 1:86367/140‑1 (MQ=255) tCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCTGGCGTGCTCTATTGATgg > 1:7631020/1‑139 (MQ=255) aTGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGcttc < 1:3580157/140‑1 (MQ=255) cAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGcttccttc < 2:4588239/140‑1 (MQ=255) gTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAATCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTGTCCTAGCCGATTCGCTTCCTGGATTCCTCGAGTGATGGTTCCTTCaa > 2:4362532/1‑139 (MQ=255) tGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGGCGATTCGCTTACTGGGTTCCACTAATGATTCGTCCGTCATg > 1:587073/1‑140 (MQ=255) tGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTTCCGATTGGCTTCCTGGCTGCCGAGATTTCTGCGTCCGTCATg > 1:217185/1‑140 (MQ=255) tGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTACTTTCCGATTCGCTTGCTGGCGTCCTCGATTTATGCGTGCGTCATg > 1:2417491/1‑140 (MQ=255) gCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGt < 1:1303012/140‑1 (MQ=255) gCCTCTCAAAATGTCTCCGTTCTCCTCACACAAGAAAGCGATCATCCGGTCGATATCCTCGCCCGTGCCAGATCTTCCTATCGGCGTTTTTTCCTGGCCGATTCGCTTCCTGGCTTCCTCTCTTGAGGCTTCCTTCAtct < 1:2398164/140‑3 (MQ=255) ccTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGGTTGCTTGCTTGCTCGATTGATTCTTGCTTGATGTc > 2:6457920/1‑140 (MQ=255) ccTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCGTCCTCTATTGATGCTTCCTTCATGTc > 2:3554838/1‑140 (MQ=255) gTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTTGCCGCTTCGCGTCCTGGCTTCCTCTATTGATGGTTCCTTCATGTCGcc > 2:1946413/1‑140 (MQ=255) tCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCGTCCTCTATTGATGCTTCCTTCATGTCGCCg > 2:2398824/1‑140 (MQ=255) aaGGTCTGAGTTCTCCTCACACCAGAAAGCGATACTCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACaa < 2:6742448/140‑1 (MQ=255) aaGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGCCGTCCTCTATTGATGCTGCCTTCAAGTCGCCGACaa > 2:5986026/1‑140 (MQ=255) aaGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCGGTGCCAGATCGTCCTATCGGCGGTGTTTCCTTGCCGAGTCGCTTCCTGGCGGCCGGGATTGATGCGTCCTGCGTGTCGCCGACaa > 2:5291552/1‑140 (MQ=255) aaGGGCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATAGCCTCGCCTGTGCCCGATCTTCCTAACGGCGTTTTTTGCTTGCCGATGCGGGTCCTGGCTGCCGCGGATGATGCTTCCGTCAGGGAGCCGACaa > 2:5627758/1‑140 (MQ=255) tGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCTTCCTGGGGTCCTCTATTGATGCTTCCGTCATGTCGCCGACCAAGTCAc > 1:5298188/1‑140 (MQ=255) tGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCAc < 2:6560256/140‑1 (MQ=255) tGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTACTTTCCGATTAGCTTCCTGGCTTGCGCTATTGATGCTTCCTTGAAGTCGCCGCCAAAGTAAc > 1:2778961/1‑140 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTTCCAGATCTTCCTATCGGCGTTTTTTACTTGCCGATTCGCGTCCGTGCTTCCGCTGATGTTGCGTGCGTCATTGCGCCGCCCATTGGACCCggggc > 1:385554/1‑138 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCGTGCGGGCTTGCTGTATTGATGGTTCCTTCATGTCGCCGACCCTGTCACCCGGGCa > 1:2245629/1‑140 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCGTCCGCTATTGATGCTTCCTTCATGTCGCCGACAAAGTAACCCGGGCa > 2:2523255/1‑140 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTTGCCGATTAGCTTACTGGCTTCCTCTATTGATGCTTCCATCATTTCGCCGACAAAGTCACCCGGGCa > 2:1166527/1‑140 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTACTTGCCGATTAGCTTCCTGGCTTGCGCTATTTATTCTTCCTTCATGTAGCCGACAAAGTCACCCGGGCa > 1:4182133/1‑140 (MQ=255) cctcTCACAAGAAAGCGATCATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCGTAGCGGCGTGGTTTGCTGGGCGATTCGCGTAGTGGGTTGCTCTATTGATGCGTGCGTCAGTTCGCCGGCCAAGTCACCCGGGCaa > 1:1673826/1‑140 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTTCCGATTCGCTTCCTGGCTGGCTCTATTGATGCTTCCTTCATGTCGCCGACCATGTCACCCGGGCaa > 2:3434815/1‑140 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCaa > 2:1761694/1‑140 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCAGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACCATGTCAACCGGGCaa > 2:3209386/1‑140 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCATGCCCATTCGCTTCCTGGCGTCCTCTATTGATGCTTCCTTCATGTAGCCGAAAATTTCACCCGGGCaa > 2:2840401/1‑140 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTCCCAGATCTTCCTATCGGCGTTTTTTCCTTTCCGAGTCGCTTGCGTGGGTGCTCTATTGATTGTTCCTTCATGTCGCCGGCAAAGTCACCCGGGcca > 1:108968/1‑138 (MQ=255) tcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAAc < 1:4255105/140‑1 (MQ=255) tcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAAc < 1:3985342/140‑1 (MQ=255) cacacaAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTGCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAAcc < 2:5772400/140‑1 (MQ=255) cacacaAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAAcc < 1:772902/140‑1 (MQ=255) acacaAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCCAACCa > 2:5115903/1‑140 (MQ=255) aGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTGCTTGCCGATTAGCGTCCTTGCGTCCTCGATTGTTGGTTGCTTCAAGTCGCCGCCAATGTCCACCCGGCAAACCATGTTg > 1:974758/1‑140 (MQ=255) aGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTTGCCGGTTCGCTTCATGGCTTCATCTCTTGAGTCTTTCGTGAAGTCGCCGACAAAGTCACCCGGGCCAACCaacttg > 1:4900602/1‑135 (MQ=255) aaaGCGATAATCCGGGCGCTATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTACTTGCCCATTCGCTTGCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAATTCACCCGGGCAAAACAAGTTGGc > 2:2700478/1‑140 (MQ=255) gATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTTCCGAGTCGCTTCCTGGGGTCCTCTATTTATGCTTGCGTCATGTGGCCGACAAGTGCACCCGGGCCAACCCTGTTGGGAGTTa > 1:1006558/1‑140 (MQ=255) tAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATg < 1:678031/140‑1 (MQ=255) aTCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATTTCGCCGACAAAGTCACCCGGGCAAACCAAGTTGGCAGTTATGcc > 2:7575532/1‑140 (MQ=255) gagacagatCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTAATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTAGGCCGAAt < 1:2609425/133‑1 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCTTGCTTGCTTCCTCTATTTATGGTTCCGTGATGTCGCCGACAATGTCACCCCGGCAAACCATGTTTGGAGTTATTCCGAAtt > 1:6345685/1‑140 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTTCCGATTCGCTTCCTGGCGTCCGCGATTTATTCTTACGTCATGTGGCCGACAAAGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAAtt > 1:1569632/1‑140 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCGTCCTCTATTTATTCGTCCTTCATGTCGCCGACAAAGTCACCCGGGCCAAACAGGTTGGGAGGTATGCCGaaat > 1:6670722/1‑138 (MQ=255) gCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCTTCCTGGCTTGCTCTATTGATTCTTCCGTCATGTAGCCGACAATGTCACCCCGGCAAACCATGTTGGCAGTTATTCCGAAtta > 1:3744639/1‑139 (MQ=255) atatCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGc < 1:4078657/140‑1 (MQ=255) atatCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTGTCCTGGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGc < 2:2625127/140‑1 (MQ=255) atatCCTCGCCTGTGCCAGATATTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCTGGCTTCCTCTCTTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGc < 1:1759877/140‑1 (MQ=255) atCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGCTTCGCGTCCTGGCGTCCTCTATTGATTCTTCCTTAATGTCGCCGCCAAAGTCACCCCGGCAAACCCTGTTGGCCGGTATGCCCCATTAGGcgt > 1:4502603/1‑138 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTTCCCATTCGCATCCTGGCGTCCGCTATTGATGCGTCCTTCATGTCGCCGACAATGTGACCCGGGCCAACCAAGTTGGCAGTTATGCCGAAATCGGGGTCTTca > 1:5429034/1‑140 (MQ=255) gCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaa < 1:3282055/140‑1 (MQ=255) gCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaa < 1:297224/140‑1 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTTGCTTTCCGCTTAGCTTCCTGGGTTCCGGTATTGATGCTTGCGTCATGTGGCCGACAAAGTAAACCCGGCAAAACATGTTTGCAGTTATGCCGTAATACGCTTCTTaaaatgca > 1:7180917/1‑135 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGCTTCCCTTACTTGCCTCCTCTATTGATGCTTCCGTCATTTAGCCGACAAAGTCACCCCGGCAAACAAGAGTGGCAGTGATGACCACTTCCGCTACTAcaatagca > 2:4285190/1‑140 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGGTTCCTCTTTTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCCAACCATGTTGGCAGTTATGCCGACTTAGGCTTCTTcaattgca > 2:6923470/1‑140 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGAGTCGCAACCTTGCGTCCGCAAATGATGCGTCCGTCAAGGCGCCGCCAAAGGCACCCGGGCCAACCAAGGTGGCACTAATGCCCAAGTCGGCTTAATcaaaggca > 2:3133228/1‑140 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTGAGGTGCCGATTCGCGTCCAGGCTTGCGCTATTTATTGTTGCTGAAATTCGCCGACAATGTCCCCCGGGCAAAACAATTTTGCAGTTATGCCGAATTAGGCTTGTTccatgggc > 1:4762745/1‑138 (MQ=255) gCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaatggcaa < 1:5741985/140‑1 (MQ=255) gCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaatggcaa < 1:7552132/140‑1 (MQ=255) gATCTTCCTATCGGCGTTTTTTCCTTGCCGATTAGCTTCCTGGGGTCCTCTATTGATGGTTCCTTCATGTGGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGGTTCTTCAATGGCAATGGt > 2:4952567/1‑140 (MQ=255) gATCTTCCTATCGGCGTTTTTTCCTTGCCCATTCGCTTCCAGGCTTCCTCTATTGATGCGTCCTTAATGTCGCCGACAATGTCACCCGGGCAAACAATTTTGGCAGTTATGCCGAATTCGGCTTCTTCAAAGGCAATTGt > 2:4133737/1‑140 (MQ=255) aTCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTc < 2:1517801/140‑1 (MQ=255) aTCTTCCTATCGGCGTTTTGTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCCTGTTGGCAGTTATTCCGAATTCGGCTTCTTCAATGGCAATTGTc < 1:1820174/140‑1 (MQ=255) tCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGGTTCCTCTATTGATGCTTCCTTCCTGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGGTATTCCGCATTCGGCGTCTTCAATGGCAATGGTCTTCg > 2:6141330/1‑140 (MQ=255) tCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCGCTATTGATGCTTCCTTCATGTCGCCGACAAAGTCACCCGGGCAAACCATGTTGGCAGGTATGCCCAAATCGGCGTCTTCAATGGCAATGGTCTTCg > 2:2237288/1‑140 (MQ=255) tCGGCGTTTTTTGCTTGCCCAATCGCGTCCTTGCTTCCTCGATTGATGCTTCCTTCATGTCGCCCACAAAGTCACCCGGGCAAACCATGTTGGCAGTTATGCCCAATTCGGCTTCTTCAATGGCAATGGTCTTCCTCaaa > 2:754357/1‑140 (MQ=255) tCGGCGTTTTTTCCGTGCCGATTCGCTTGCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGGTATGCCGAATTCGGCTTCTTCAATGGCAATGGTGTTCGTCaaa > 2:1595896/1‑140 (MQ=255) cGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGGTTCCGCTATTGATGCTTCCTTCATGTCGCCGACAATGGCACCCGGGCAAACCAGGTTGGCAGTTATGCCGAATTAGGCTTCTTCACTGGCAATGGTCTTCGTCCaag > 2:7121664/1‑140 (MQ=255) cGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTAGTGATGCTTCCTTCATGTCGCCGACAATGTCACCCCGGCAAACCATGTTTGCCGTTTTGCCGAATTCGGCTTCTTCAATGGCAATTGTATTAGTCAaag > 2:1105732/1‑140 (MQ=255) cGGCGTTTTTTCCTTGCCGATTCGCGTCCTGGCTTGCTCTATTGATGCTTCCGTCATGTCGCCGACAATGTCACCCCGGCCAACCAAGTTGGCAGTTATTCCGAATTCGGCTTCTTCAATTGCAATGGTGTTCGTCaaat > 2:862429/1‑139 (MQ=255) cGTTTTTTCCTTGCCGATTCGCTTCCAGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCCAGTTGGCAGTTATTCCGAATTAGGCGTCTTCAAAGGCAATGGTCGTCGTCAaagaac > 2:2091289/1‑139 (MQ=255) ttttttCCTTGCCGATTCGCTTCCTGGCTTCCTCTAGTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGcc > 2:7414648/1‑140 (MQ=255) tttCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCaaa < 2:5429034/140‑1 (MQ=255) ttGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCAc > 2:1266209/1‑140 (MQ=255) ttGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTAGTCAAAGAAGCCAAACCCAc > 2:4077367/1‑140 (MQ=255) ttCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa < 2:298001/140‑1 (MQ=255) | CATTGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAGCGC > NZ_CP034943/2812645‑2812920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |