| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,830,550 | G→T | 12.9% | A98S (GCA→TCA) | brnQ → | branched‑chain amino acid transport system II carrier protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,830,550 | 0 | G | T | 12.9% | 794.9 / 25.4 | 388 | A98S (GCA→TCA) | brnQ | branched‑chain amino acid transport system II carrier protein |
| Reads supporting (aligned to +/- strand): ref base G (141/183); new base T (61/2); total (203/185) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.41e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 388 total aligned reads displayed.
GTGTCGGCCTGCCGCTTTTAGGTGTTGTAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTACCTGGCTTTAAATCCTACAA > NZ_CP034943/2830413‑2830688 | tgtCGGCCTGCCGCTTTTAGGTGTTGTAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTGGTTATTTAACAAAAGGACCGCTGGTTTCaa > 1:4116905/1‑140 (MQ=255) tCGGCCTGCCGCTTTTAGGTGTTGTAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTTACAATCGGACCGCTGTTTGCAAtt > 1:4944099/1‑140 (MQ=255) gCCTGCCGCTTTTAGGTGTTGTAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCcg < 1:7285214/140‑1 (MQ=255) ccGCTTTTAGGTGTTGTAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAAc < 2:4442061/140‑1 (MQ=255) gttgtAGCTGTTGCTTTAAGAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGGTGGGTTTTTATGAATCGGGCCGCGGTTTTCAATTCCGCGAACAGGCACTGtttg > 1:2274054/1‑139 (MQ=255) ttgtAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCAGTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGCACAGGCACGGtttgt > 1:566213/1‑138 (MQ=255) ttgtAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAAACATTTTTACAGTCGTTCTTTATTTAAAAAACTGACCGCTGTTTTCAAATCCGCGAACAGGGACTGTTTca > 2:5499199/1‑139 (MQ=255) ttgtAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATACGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCCCTGTTTTCAATTACGCGAACAGGCACTGTTTCt > 2:4861311/1‑140 (MQ=255) tgtAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTGCTTTATTTAACAATCGGACCGCTGGTTTCAATTCCGCGAACAGGCACGGTTTCtt > 1:3719103/1‑140 (MQ=255) tAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCGTGCAGATAAAGCACAGCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTAt < 2:7202784/140‑1 (MQ=255) tGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCCCGGTTTGCAATTCCGCGAACAGGCACTGTTTGTTATTaaa > 1:4398565/1‑140 (MQ=255) gTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAAAAATCGGACCGCGGTTTTCAATTACCCGAACACGCCCAGTTTCTTATTaaaa > 1:4159043/1‑139 (MQ=255) gTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTAGTTAATTAACAAAAGGACCGCCGTTTGAAATTCAGAGAACAAGACCTGTttattagtaaaa > 2:950856/1‑134 (MQ=255) gTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATGTTTACAGTCGTTCTTTATTTAAAAAACGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAAt > 2:1626921/1‑140 (MQ=255) tGCTTTACCAGGTACAGATGCGAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACCGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTg < 1:4743018/140‑1 (MQ=255) tGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTg < 1:819837/140‑1 (MQ=255) tGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTg < 1:7124/140‑1 (MQ=255) tGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTg < 1:5247408/140‑1 (MQ=255) tGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTg < 1:5959616/140‑1 (MQ=255) tGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTATATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAAAAGGCACTGTTTCTTATTAAATTg > 2:3856382/1‑140 (MQ=255) gCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTGGTTTTTTTAACAATCGGACCGCGGTTTTCAATTCCGCGAACAGGCACAGTTTCTTATGTAAtttc > 1:5532402/1‑138 (MQ=255) tAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCt < 2:5229609/140‑1 (MQ=255) aGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTAc < 1:1511544/140‑1 (MQ=255) gTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAAACGGACCGCGGTTTGCAATTCCGCGAACAGGCCCGGTTTGTTATGAAATTTCGGCTGTACCt > 1:4983534/1‑140 (MQ=255) gTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTAACAGTCGTTCGTTATTTAAAAAAAGTACCGCGTTTTTCAATTACGCGAACAGGCAAGGTTTATTATTAAATTTCGGGTGTACCt > 2:2799080/1‑140 (MQ=255) tACAGATGCTCAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGGTCTTTATTTAACAATCGGACCGGTGTTTGCACTTCCGCGAACAGGCACAGTTTCTTATGAAATTGCGGCTGTACCtg > 2:4183168/1‑139 (MQ=255) tACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTACGCGAAAAGGCACTGTTTGTTATGAAAATGCGGCTGTACCtt > 2:2377424/1‑140 (MQ=255) gATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGt < 1:433623/140‑1 (MQ=255) cTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTGGTTTATTTAAAAAACGGACCCCTGTTTGCAATTACCCCCAAACGCACTCTTTATTATTAAATATCGGCTGTACCAGTTGTAcgc > 1:6648751/1‑140 (MQ=255) tAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAggcg < 2:7637229/140‑1 (MQ=255) aaaGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAggcgg > 2:495562/1‑140 (MQ=255) aaaGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAgg < 1:6344827/137‑1 (MQ=255) aaaGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAAAAAACGGACCGCGGTTTTCAATTCCGCGAACAGGCACGGTTTGTTATGAAAATTCGGCTGTACCTTTTGTAtgcgg > 1:6970878/1‑140 (MQ=255) cTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAAATCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGcc > 2:2882606/1‑140 (MQ=255) ttGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATAGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTATTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGcgg > 2:4080623/1‑138 (MQ=255) ttGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTAGTTAGTTAACACTCGGACCGCGGTTTTGAATTCCGCGTACAGGGCCTGGTTGTTATGACATTGCGGGGGTACCGTGTGTAgggggccagcag > 2:1930439/1‑134 (MQ=255) tGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTTCAATTACGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCgg > 2:6675657/1‑140 (MQ=255) tGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAAACATCGGACCGCGGTTTGCAATTCCGCGAACAGGCACGGTTTCTTATGAAATTTCGGCGGTACCATTTGTAGGCGGCCTGCCgg > 1:3498650/1‑140 (MQ=255) tGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTGCTTTATTTAACAATCGGCCCGCTGATTGCAATACCCCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCgg > 2:1814361/1‑140 (MQ=255) tGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTGCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCgg > 2:2160426/1‑140 (MQ=255) tGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTGCGTTATTTAACAATCGGACCGCGGTTTGCAATTCCGCGAACAGGCCCGGTGTCTTATGAAATTGCGGGGGTAGCTTTTGTAGGCGGCAGGCCgg > 1:1133100/1‑140 (MQ=255) tGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGGCGTTCGTTATTTAACAAACGCACCGCGGTATGCAAATCCGCGAACACCGCCTGGTTCTTATGAAAAATCGGCAGTAGCTGTTGTTGCCCGCATGCCgc > 2:5028842/1‑139 (MQ=255) tGCAGATAAAGCACATCCGGTCTTTGGAACCATGTTTACAGTCGTTGTTTTTTTATACAGAGGCCCGGTGTTTGGCAATCCGCGAACAGGCACGGTTTCTTATGGAATTTGGGCGGTACCATGTGTCGGCGGCCTGCCgg > 1:6779135/1‑140 (MQ=255) gCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCACTTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGc < 2:3442851/140‑1 (MQ=255) gCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGc < 2:1020671/140‑1 (MQ=255) gCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGc < 2:7553723/140‑1 (MQ=255) gCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGc < 2:7467680/140‑1 (MQ=255) gCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGc < 2:6602046/140‑1 (MQ=255) gCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAAGTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTACGCGGCATGCCGGc < 2:6803810/140‑1 (MQ=255) cAGATAAAGCACAGCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCa < 1:2047734/140‑1 (MQ=255) gATAAAGCACATCCGGTATTAGGAACCATATTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAAGTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATg < 2:7399875/140‑1 (MQ=255) aaaGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTGTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCGGTACCTTTTGTAGGCGGCATGCCGGCATGGCt > 2:5734729/1‑140 (MQ=255) aaaGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTGGTTATTTAACAATCGGACCGCTGTTTGCCATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCt > 2:7063512/1‑140 (MQ=255) aaaGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCt < 1:5904622/140‑1 (MQ=255) aaaGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCt < 2:2528552/140‑1 (MQ=255) aaaGCACATCCGGTCTTTGGAACCATTTTGACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCt < 2:2683878/140‑1 (MQ=255) aaGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCGTTATTTAACAATAGGACCGCGGTTTGCAAGTACGCGAACAGGCGCGGTTTGTTATGGAATTGCGGCTGTACCGTTTGTAGGCGGCCATCCGGCATGGCta > 1:3268120/1‑139 (MQ=255) acaTCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTTACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAAATGCGGCTGTACCTTTTGTAGGCGGCATTCCGGCATGGCTCacac > 2:1840024/1‑140 (MQ=255) tCCGGTCTTTGGAACCATTTTTACAGTCGTTGTTTATTTAACAATCGGACCGCGGTTTTCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCGGGACCTTTTGTAGGCGGCCTGCCGGCATGGCTCACActtg > 2:2278675/1‑139 (MQ=255) tCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACActtc < 2:3265702/140‑1 (MQ=255) tCCGGTCTTTGGAACCATTTTTACAGTCGTGGTTTATTTAAAAATCGGACCGCGGTTTTGAATTACGCGAACACGCACGGGTTGTTATTAAATTGCGGGTGTAACGTTTTTAGGCGGCATGCCGGCATGGCTCACAcgtc > 1:3976438/1‑140 (MQ=255) tCCGGTCTGTGGAACCATTTTTACAGTCGTTCTTTATTTAAAAATCGGACCCCTGTTTGCAATTCCGCGAACAGGGACTGTTTGTTATGTAATTGCGGCTGTTCCGTGTGTATGCGGCATGCCGGCATGGCTCACActtg > 2:5627901/1‑139 (MQ=255) gTCTTTGGAACCATTTTTACAGTCGTTGTTTATTTAAAAAAAGGACCGCTGTTTGCAATTCCGCGAACAGGCACAGTTTATTATGAAATTGCGGCTGTACCATTTTTAGGCGGCATGCCGGCCTGGCTCACACTTCTTAt > 2:2610418/1‑140 (MQ=255) tCTTTGGAACCATTTTTACAGTCGTTGTTTATTTAACAAACGGACCGCGGTTTGCAATTCCGCGAAAAGGCACTGTTTCTTTTGAAATTGCGGCTGTACCTTTTGTAGGCGGCAATCCGGCATTGCTCACACATCTTAtt > 2:113395/1‑140 (MQ=255) tttGGAACCATTTTTACATTCGTTGATAATTTAACAATAGGACCGCGGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAAATGGCTCAGTACCGTTTGTATGCGGCATGACGGCATGGCTAACAATTCTTAtttt > 2:1761102/1‑140 (MQ=255) tGGAACCATTTTTACAGTCGTTGTTTATTTAAAAAAAGGACCGCGGTTTTGAAATCCGCGAACACGCACTGTTTCTTATGAAAATGCGGCGGTACCTTTTGTTGGCGGCATGCCGGCAGGGCTCACACGTGTTATTTTTa > 1:2228239/1‑140 (MQ=255) tGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTa < 2:6959576/140‑1 (MQ=255) tGGAACCATTTTTACAGTCGTTCTTTATTTAAAAATCGGACCGCTGTTTTCAAATCCGCGAACAGGCCCTGTTTCTTAAGAAATTTCGGCTGTACCTTTTGTAGGCGGCATTCCGGCATGGCTCACACGTCTTATTTTTa > 2:5899297/1‑140 (MQ=255) tGGAACCATTTTTACAGTCGTGGGTTATTTAACAATAGGACCGCTGTTTGCAATTACGCGAACAGGCCCTGGTTCTTATGAAATTGCGGCTGTACCTTTTGTATGCGGCCAGCCGGCAAGGGTCACACATCTTATTTTTa > 1:1708779/1‑140 (MQ=255) gAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACg < 1:5341905/140‑1 (MQ=255) tttttACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCGGTACCTGTTGTAGGCGGCATGCCGGCATGGCTCACACGTCGTATTTTTAAGtttgtt > 2:5430439/1‑140 (MQ=255) tttttACAGTCGTTCTTTATTTAACAATCGGACCCCTGTTTTCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGtttctt > 2:6405044/1‑140 (MQ=255) tttttACAGTCGTTCTTTATTTAACAAACGGACCGCGGTTTGCAATTCCGCGAACAGGCACTGTTTCGTATGAAAATGCGGCTGTACCTTTTTTAGGCGGCATGCCCGCAAGGCTCACACGTCTTAATTTTACGtttgat > 2:3565520/1‑137 (MQ=255) tttACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGtttctttt < 2:6296147/140‑1 (MQ=255) aCAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTttcttttctt < 1:1824776/140‑1 (MQ=255) aGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTg < 1:3620583/140‑1 (MQ=255) aGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTg < 1:2634392/140‑1 (MQ=255) aGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTg < 1:5134407/140‑1 (MQ=255) aGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTg < 1:1887026/140‑1 (MQ=255) aGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTGTCTTTTCTTTg < 2:2047105/140‑1 (MQ=255) aGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATGCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTg < 1:7447896/140‑1 (MQ=255) gTCGTTCTTTAATTAAAAATCCGACCCCTGTTTTCAATTCCCCCAACAGGCACAGTTTCTTATTAAATTGCGGCTGTACCTATTGTAGGCGGCATTCCCGCATGGCTCACACTTCTTATTTTTACCtttattttaattta > 2:1326994/1‑134 (MQ=255) cGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTg < 2:7250614/140‑1 (MQ=255) ttCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGtt < 1:3050168/140‑1 (MQ=255) ttCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGtt < 2:2971423/140‑1 (MQ=255) ttCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGtt < 2:1444683/140‑1 (MQ=255) ttCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAAGTGCGGCTGTACCTGTTGTAGGCGGCATGCCGGCATGGCTCACACTGCTTATTTTTACGTTTCTTTTCTTTGCTGtt < 2:4780246/140‑1 (MQ=255) ttCTTTATTTAACAATCGGACCGCTGTTTGCAAGTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGtt < 2:4333740/140‑1 (MQ=255) ttCTTTATTTAACAATCGGACCGCTGTGTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATGTTTACGTTTCTTTTCTTTGCTGtt < 2:6127522/140‑1 (MQ=255) tttaACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTTCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGtaat > 1:1009059/1‑138 (MQ=255) aaCAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTAcc < 1:2392669/140‑1 (MQ=255) aaCAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTAcc < 1:2824230/140‑1 (MQ=255) aaCAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTAcc < 1:4599460/140‑1 (MQ=255) tCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGtt < 1:6159418/125‑1 (MQ=255) tCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTACCTGGCt > 2:4625290/1‑140 (MQ=255) aCCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTACCTGGCTTTaa < 2:3027620/140‑1 (MQ=255) cTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTACCTGGCTTTTATTcc > 1:3905597/1‑140 (MQ=255) tGTTTGCAAGTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTACCTGGCTTTAAATCCt < 2:5819537/140‑1 (MQ=255) cgtgtGCAATTCCGCGACCAGTCACTGTGTCTTATGAAATTGCGGCTGTACCTTTTGGAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTGGCTGTTACGTACTACCTGGCTTTAAATCCt < 2:3965876/136‑1 (MQ=255) tGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTACCTGGCTTTAAATCCTACaa > 1:131980/1‑140 (MQ=255) | GTGTCGGCCTGCCGCTTTTAGGTGTTGTAGCTGTTGCTTTAACAGGTACAGATGCTAAAGGCCTTGCAGATAAAGCACATCCGGTCTTTGGAACCATTTTTACAGTCGTTCTTTATTTAACAATCGGACCGCTGTTTGCAATTCCGCGAACAGGCACTGTTTCTTATGAAATTGCGGCTGTACCTTTTGTAGGCGGCATGCCGGCATGGCTCACACTTCTTATTTTTACGTTTCTTTTCTTTGCTGTTACGTACTACCTGGCTTTAAATCCTACAA > NZ_CP034943/2830413‑2830688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |