| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,319,761 | T→G | 5.0% | pseudogene (544/1292 nt) | EO946_RS17170 ← | arabinogalactan endo‑beta‑1,4‑galactanase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,319,761 | 0 | T | G | 5.0% | 1256.8 / 7.1 | 477 | pseudogene (544/1292 nt) | EO946_RS17170 | arabinogalactan endo‑beta‑1,4‑galactanase |
| Reads supporting (aligned to +/- strand): ref base T (194/233); new base G (44/2); total (240/237) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.25e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 526 total aligned reads displayed.
AATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGCCAG > NZ_CP034943/3319625‑3319900 | ccTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGatcat < 2:2422134/140‑1 (MQ=255) cTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGatcatc > 2:5634605/1‑140 (MQ=255) ggTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTTATGCTCttt > 2:7018326/1‑140 (MQ=255) gtgtctCCCTGACCGCGCGGCTTCCTTAATTAAATAATTGGCTCATTTTCTCCCAATCGGTTTCACCTGCAAATGCCCATGTCGTTTCATTTCCGACGTGTACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGc < 2:1784385/139‑1 (MQ=255) ctgtctCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGc < 1:5243290/140‑1 (MQ=255) ctgtctCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCGTCCTTGATCATCTTTTGc < 2:1538456/140‑1 (MQ=255) tctcCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCGTCCTTGATCATCTTTTGCAgg > 2:1622185/1‑140 (MQ=255) tcCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCt < 1:4594102/140‑1 (MQ=255) tcCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCt < 1:1920402/140‑1 (MQ=255) ccTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCttt < 2:2945626/140‑1 (MQ=255) ccTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCttt < 2:7644880/140‑1 (MQ=255) ccTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCttt < 1:2802442/140‑1 (MQ=255) ccTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCttt < 2:3455719/140‑1 (MQ=255) ccTGACCGCGCGGCGGCCGCCATGACAGAATTGGCTCCTCTTCGCCCAATCGGCTTCACCTGCAACTGCCCCTGTCGTTTCCTTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCATTTGCAGGCttt < 2:2757700/140‑1 (MQ=255) aCCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGttt < 1:3641066/140‑1 (MQ=255) cgcgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCg < 1:2669395/140‑1 (MQ=255) cgcgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTATCATTTCCGACCTGAAACAAGCCCATGTCGACGGCTTGCTGGTGCATGTTTTGCAGGgtttgtttgg > 1:5120034/1‑138 (MQ=255) cgcgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGATTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACCCCTTCCTTGATGATCTTTTGCAGGCTTTGTTTCg > 2:5369605/1‑140 (MQ=255) cgcgGGTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACGTGCAAATGCCCCTGTCGTTGGATTTGCGCCCTGAACCATGGCGATGTCGACGCCTTCCGGGATCATGTTTTGCAGGGTTTGTTTGGta > 2:190084/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTGATTTCCGGCCTGAACCATGCCCATGTCGACGCCGTCCGGTTTCAGCTTTTTCAGGCGTTGTTTCGta > 1:1227697/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCt < 2:5549648/130‑1 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGta < 2:3842901/140‑1 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGta < 1:54207/140‑1 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCGTCCTTGATCATCTTTTGCAGGCTTTGTTTCGta > 1:7649241/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACCCCTTCCGTGATCAACATTTGCAGGCGTTGTTTCGta > 1:3830085/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCAAGCCAAAGTCGACGCCGTCCTTGATCATCTTTTTCAGGCGTTGTTTCGta > 1:593875/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGAACTGAACCATGCCAAATTAGAAGCCTTACTTGAACATCTTTTTCAGGCTTTGTTTCGta > 1:1489037/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGAACTGAAACATGCCAAAGTCGACGCCGTACTTGATGATCTTTTGCAGGCTTTGTTTCgga > 1:2588259/1‑138 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAATTCCGACCTGAACCATGCCAAAGTCGACCCCTTCCTTGTTCAACTTTTTCAGGCTTTGTTTAGta > 1:3381603/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAATTACGACCTGAACCATGCCCAAGTCGACGCCGTCCTTGATCATCTTTTTCAGGCTTTTTTTAGta > 1:5626899/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCACTGTCGTTTCATTTCAGACCTGAACCATGCATATTTATAAGCATTCCTTGATCTTCTTTTGAAtgttttgtttttta < 1:839190/140‑5 (MQ=255) gctgCTTCCTTCATTAAATTATTTGCTCATTTTCGCCCAATGGGTTTCACCTGCTAATGGCGCTGTAGTTTCATTTCCGTCCTTAAGGTTTCCATTTTCTACGGGTTCATTGATCATCTTTTGCAGGCTTTTTTTCGtat < 2:4105657/137‑1 (MQ=255) gcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGtat < 1:3022070/140‑1 (MQ=255) gcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGtat < 2:7392266/140‑1 (MQ=255) gcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGtat < 1:5659234/140‑1 (MQ=255) gcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGtat < 2:6213258/140‑1 (MQ=255) gcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGtat < 2:5840630/140‑1 (MQ=255) ttGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCCTGCCAATGTCGACGCCTTGCTTGATCCTCTTTTTCAGGCTTTGTTTAGTATACTCAGAGAGCGTTGtttttt > 2:361091/1‑140 (MQ=255) ttGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCGGAACCATGCCAATGTCGACGCCTGCCGTGTTCATCGTTTGCAGGCTTTGTTTCGTATACTCATATAGCTTTGtttttt > 1:1008479/1‑140 (MQ=255) ttGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTGTCAGTTCCGACCAGAACCATGCCAATGTCGACGCCGTCCTTGATAATCTTTTTCAGGCTTTGTTTCGTATACTCATAGAGCTTTGtttttt > 2:5152161/1‑140 (MQ=255) tGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTGTCATTTGCGACCTGAACCATGCCCATGTCGACGCCTGCCGTGTTCAGCTTTTGGAGGGGTTGTTTCGTATAATCATAGAGGTTTGttttttt > 1:3218156/1‑140 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCATGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 2:4825126/140‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 1:4155150/140‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 2:335068/140‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 1:1376485/140‑1 (MQ=255) ttttCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCGTCCTTGATCATCTTTTGCAGGCGTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTTGCTTCa > 2:7532787/1‑140 (MQ=255) gCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCt < 2:6727701/140‑1 (MQ=255) gCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCt < 1:7141868/140‑1 (MQ=255) gCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCt < 1:3511384/140‑1 (MQ=255) tttCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGcc < 2:7170637/140‑1 (MQ=255) ttCACCTGCAAATGCCCCTGTCGTTTCATTTCCGCCCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCCTAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGccc < 1:3599063/140‑1 (MQ=255) cACCGGCACATGCCCCTGTCGTGTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCCTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCaa < 2:4243236/140‑1 (MQ=255) ccTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCCTGCCCATGTCGACGCCGTCCGTGATCATGTTTTGCAGGCGTTGTTTGGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGc > 1:4318682/1‑140 (MQ=255) tGCAACTGCCCCTGACGTTTCATTTCCGACCTGAACCAAGCCAATGTCGACGCCTGCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTTAGCTTCGCCCAAGCtt < 1:5790722/140‑1 (MQ=255) tGCAAATGCCCCTGTCGTGTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCGTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCtt < 2:5208496/140‑1 (MQ=255) gCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCGTGATCATGTTTTGCAGGCGTTGTTTGGTATACTCATAGAGCTTTGTTTTTTTAGGTTCAAAGCTGAGCTTAGCCCCAGCttt > 2:6883712/1‑140 (MQ=255) gCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCAAGCCAATGTCGACGCCTTCCGTGCTCATCTTTTGCAGGGGTTGGTTCGTATAGTCATAGAGCGTGGTTTTTTTAGCTTCAAAGCTGTGCTTCGCCCAAGCttt > 2:5072917/1‑140 (MQ=255) aaaTGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTGGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTgg < 2:4310557/140‑1 (MQ=255) aaaGGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCAAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTgg < 2:2074716/140‑1 (MQ=255) atcctccTGTTGTTTCATTTCAGACCTGAACCATGCCGATGTCAACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGCTTTTTTTGCTTCAAAGCTGGGATTCGCCCAGGCTTTgggc < 2:901054/135‑2 (MQ=255) aTGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGt < 1:1750121/140‑1 (MQ=255) aTGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGt < 1:5054826/140‑1 (MQ=255) aTGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCCTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGt < 2:5992773/140‑1 (MQ=255) ccccTGTCGTGTCATTTCCGACCTGAACCATGCCAATGTCGACGGCGTCCTTGGTGCTCTTTTTGAGGGGGTGTTTGGTTTAATCATAGTGGTTTGTTTTTTTATGTTGAAAGCTGTGGTTAGCCCAACCGTTTGGTAcc > 1:2115693/1‑140 (MQ=255) tGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTGCTTGATCATCTTTTGCAGGCGTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCGTCGCCCAAGCTTTGGGTACCTTCt > 2:1428208/1‑140 (MQ=255) gTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTg > 2:4592503/1‑140 (MQ=255) gTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTg < 2:7122946/140‑1 (MQ=255) taaTTTCCGACCTGAACCATGCCAAAGTGGACGCCGTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCGTTGTTTTTTTAGCTTCAAAGCTGATCTTCGCCCCAGCGTTGGGTACCTTCTGTTTCGc > 2:3194323/3‑140 (MQ=255) tCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGAt < 2:1513735/140‑1 (MQ=255) tCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGAt < 2:5723794/140‑1 (MQ=255) tCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGAt < 2:3772951/140‑1 (MQ=255) tCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTGAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGAt < 1:6263851/140‑1 (MQ=255) tCCGACCTGAACCATGCCAATGTCGACGCCGTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGAt < 1:746188/140‑1 (MQ=255) tCCGACCAGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGTCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGAt < 2:1089935/140‑1 (MQ=255) aCCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGc > 1:6712813/1‑140 (MQ=255) tGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTAGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCa < 1:7295751/140‑1 (MQ=255) cATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAAt < 2:6395013/140‑1 (MQ=255) cATGCCAATGTCGACGCCTTCCTTGATCATCTTTGGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAAt < 2:4725408/140‑1 (MQ=255) cATGCCAATGTCGACGCCTTCCTGGATCATCTTGTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTACTGTTTCGCAGGATCGGCCCAGAAAt < 2:2557284/140‑1 (MQ=255) tGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTGTCGTATAGTCATCGAGGTTTGTTTGTTTAGCTTCAAAGCTGAGCTTCGGCCACGCTGGGGGTCGCTGCTGTTTCGCAGGAGCGGGCCAGAACTcg > 1:4018599/1‑139 (MQ=255) gCCAATGTCGACGCCTTCCTTGATCAGCTTTTGCAGGCTTTGTTTCGTATACTCATATAGCTATGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCTCAGGATCGGCCCAGAAATCAg > 1:1861476/1‑140 (MQ=255) gCCAATGTCGACGCCTTCCTGGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTGTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAg < 2:1265825/140‑1 (MQ=255) ccAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGa < 1:6550896/140‑1 (MQ=255) aTGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGaata > 1:2483061/1‑140 (MQ=255) aTGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGaata > 2:2310788/1‑140 (MQ=255) aCGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGaaa > 1:6398775/1‑140 (MQ=255) aCGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGaaa > 2:6539080/1‑140 (MQ=255) aCGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGaaa > 2:1207391/1‑140 (MQ=255) aCGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGaaa > 2:266210/1‑140 (MQ=255) aCGCCTTCCTTGATCATCTTTTGCAGGCTTGGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTAGCAGGATCGGCCCAGAAATCAGAATAATGaaa > 2:3956092/1‑140 (MQ=255) cgacttcattGATCATCTTTTGCAGGCTTTGTTTAGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAg < 2:1811865/137‑1 (MQ=255) cttccttGATCATCTTTTGTAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCg > 1:5584696/1‑140 (MQ=255) tccttGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGc < 1:4746425/140‑1 (MQ=255) tccttGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGc > 1:3157871/1‑140 (MQ=255) ccttGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGcc > 2:6364554/1‑140 (MQ=255) ccttGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGcc > 2:6135259/1‑140 (MQ=255) ttGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGCCAg < 1:4504454/140‑1 (MQ=255) ttGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGCCAg < 1:6861175/140‑1 (MQ=255) ttGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGCCAg < 1:6987962/140‑1 (MQ=255) ttGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGCCAg < 1:2856429/140‑1 (MQ=255) | AATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTCGCAGGATCGGCCCAGAAATCAGAATAATGAAAGTCGGCCAG > NZ_CP034943/3319625‑3319900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |