| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,511,851 | T→G | 7.0% | Y156D (TAT→GAT) | EO946_RS18060 → | LacI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,511,851 | 0 | T | G | 7.0% | 1504.2 / 16.8 | 522 | Y156D (TAT→GAT) | EO946_RS18060 | LacI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (169/290); new base G (60/2); total (230/292) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.04e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 543 total aligned reads displayed.
AACCTTTAAGCAAAATCATGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGGAGATCTTACAGCAGGCTGAAGC > NZ_CP034943/3511712‑3511990 | ttAAGCAAAATCATGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCTGCATGAATCACCCAGTCGTGTTTCTGGAACCAACACCTGAAGGCGCACCTTCAGTGTCCAGTGACGGCtatata > 1:4339127/1‑140 (MQ=255) ttAAGCAAAATCATGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACCGCgagata > 2:7676502/1‑140 (MQ=255) ttAAGCAAAATCATGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTATGGACAGAACACCTGAAGGCGCTCCGTCTTTGTGCAGTGACGGCtatata > 1:722066/1‑140 (MQ=255) tAAGCAAAATCATGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATag > 2:3601756/1‑140 (MQ=255) tAAGCAAAATCATGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTGTTTATTGTCAGAAAACCTGAAGGCGCTCCTTCTGTGTCCATTGAAGGCgatatgg > 1:1773217/1‑138 (MQ=255) gCAAAATCATGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATaggag < 1:6902007/140‑1 (MQ=255) aaTCATGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTGTTTGTGGCCCGGAAACCAGAAGGCGCTCCTTCTGTGTGCCGTGACGGGGAGATAGGTGGgaa > 1:687953/1‑140 (MQ=255) tGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTGTGGACACAACACCTCAAGCCGCTCCTACTGGGTCCAGTGACGGCGCGATAGGAGGCAAAGTAg > 2:4130940/1‑140 (MQ=255) ttGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGCCAGAACACCGGAAGGCGCTCCGTCTGTGTCCAGTGACGGGGATATAGGAGGAAAATTAgcc > 1:5466879/1‑140 (MQ=255) cATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAg < 1:3538163/140‑1 (MQ=255) cATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAg < 1:7022036/140‑1 (MQ=255) tattGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCca < 2:5621837/140‑1 (MQ=255) attGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTATTGTGGCCACAACACCAGAACGCGCTCCGTAGGGGTCCACTGACGGCTATATAAGTGGCAAAATAGcccccgcacgccc > 1:5130217/1‑133 (MQ=255) ccGCAACGAATTACCCGGATCTTGAGGACTATAGCGGCATGAATCACCCAGTCGTTTTTATGGACAGAACACCAGGAGGCGCTCCGTCTGTGTCCAGTGGCGGGTAGATAGGCGGAAAATTTGCCGCCGGAGCcagaatt > 2:1823252/1‑135 (MQ=255) cGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTc < 2:6992844/140‑1 (MQ=255) gCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCa < 1:5390247/140‑1 (MQ=255) gCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCACTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCa < 2:862302/140‑1 (MQ=255) cGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCcgg < 1:7158832/140‑1 (MQ=255) aTCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTATGGACAGAACAACAGAAGGCGCGCCGTATTTGGACAGAGTCGGCTATATAGGCAGAAAAATAGCCGCCGAAACCCACAATCACGGTAAAAGCccgcgg > 2:3096011/1‑140 (MQ=255) tCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGa < 1:4114786/140‑1 (MQ=255) tGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCa < 2:2064017/140‑1 (MQ=255) tGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCa < 2:2284855/140‑1 (MQ=255) tGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCa < 2:3362212/140‑1 (MQ=255) tGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCa < 1:1457495/140‑1 (MQ=255) tGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCa < 2:7414043/140‑1 (MQ=255) aGGAATATCGCGGCAGGAATCACCCAGGCGTGTTTCTGGACAGAACACCTGAAGGCGCTCCGTCTGTCTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg < 1:6763891/140‑1 (MQ=255) aGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg < 1:2457661/140‑1 (MQ=255) aGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg < 2:6048501/140‑1 (MQ=255) aGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg < 1:3343570/140‑1 (MQ=255) aGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg < 1:3624113/140‑1 (MQ=255) aGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg < 1:1687453/140‑1 (MQ=255) aGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCGGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCAGTCACGGTAAAAGCCGGCGGATCACg < 1:6435661/140‑1 (MQ=255) aGGAATATAGCGGCATGAATCACCCAGTAGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg < 1:4731481/140‑1 (MQ=255) aGGAATATAGCGGCAGGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg < 2:1880972/140‑1 (MQ=255) aGGAATATAGCCGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCATTCTGTGTCCAGTGACGGATATATAGGAGGAAAATTATCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg < 1:6131531/140‑1 (MQ=255) aGCGGCATGACTCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 1:3081389/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGCACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 1:1263226/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 2:6535369/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 1:3804550/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 2:1377212/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 2:2472471/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 2:3675929/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 1:3231795/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 2:4489911/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 2:2744708/140‑1 (MQ=255) aGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 2:6813396/140‑1 (MQ=255) aGCGGCATGAACCACCCAGTCGTTTGTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 2:5185023/140‑1 (MQ=255) aGCCGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTgag < 2:2159924/140‑1 (MQ=255) ggCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAgg < 2:163977/140‑1 (MQ=255) gCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCGTCTTTGTGCAGTGAAGGGGATATAGGAGGAAAAATAGCCCCCGAAGCCCTCATTCACGGTAACAGCCGGCGGATAACGCACTTGAGAggg > 2:5842712/1‑139 (MQ=255) gCATGAATCACCCAGTCGTGTTTCTGGACAGAACACCAGAAGGCGCGCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGt > 2:3433606/1‑140 (MQ=255) gagacagcACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAACAGCCGGCGGATCACGCTCTTGAGAGGTc < 1:2237029/133‑1 (MQ=255) cATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTc < 1:2386176/140‑1 (MQ=255) tGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCGATATAGGAGGAAAATTATCCGCCGAACCCATCATTCACGGTAAAAGCCCGCGGATCACGCTGTTGTGAGGTCCt > 2:7212402/1‑140 (MQ=255) tGAATCACCCAGTCGTGTTTGTGGACAGAACACCTGAAGGCGCTCCTTGGGTTTCCAGTGTCGGCTATATAGGGGGTAAATTAAGCGCCGAATCCATCAATCAAGGGAAAATCCGGCGGTTCACGCTGGTgagttggact > 1:4790494/1‑133 (MQ=255) aTCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGACGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCt < 2:4001476/140‑1 (MQ=255) aTCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCt < 2:6714789/140‑1 (MQ=255) aTCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCGATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCt < 1:4490910/140‑1 (MQ=255) aTCACCCAGTCGTTTTTATGGACAGAACACCAGAAGGCGCTCCTTCTGTGTCCAGTGAAGGCTATATATGAGGAAAATTAGCCGCCGAAGCCAACATTCACGGTAAAAGCCGGCGGATAAAGCTCTTTACAGGGCCGGca > 2:5918945/1‑139 (MQ=255) cACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCACCTTCTGTGTCCAGTGTCGGGTATATAGGAGGAAAATTAGCCGCCGAAGCCCTCATTCACGGTAAAAGCCCGCGGATCACGCTCTTGATAGGTCCTGCTCa > 2:5484931/1‑140 (MQ=255) aCCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGTAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCAc < 2:4339602/140‑1 (MQ=255) aCCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCAc < 1:3937904/140‑1 (MQ=255) gTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGATGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGcc < 1:5261023/140‑1 (MQ=255) gTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGcc < 1:4626864/140‑1 (MQ=255) cgctgttCTGGACAGAACACCTGAAGGCGCTCCTACTCTGTCCAGTGACGGATATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAACGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGccga < 1:7631607/135‑3 (MQ=255) cGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTa < 1:2034258/140‑1 (MQ=255) cGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTa < 1:6691445/140‑1 (MQ=255) cGTTTGTCTGGACAGAACACCTGAAGGCGCTCCGTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTa < 1:5782823/140‑1 (MQ=255) gTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTAc < 1:5603699/140‑1 (MQ=255) ggACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAg > 2:6880867/1‑140 (MQ=255) ggACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAg > 2:4633341/1‑140 (MQ=255) aCAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGAc < 1:803977/140‑1 (MQ=255) aaCACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCt > 2:4829479/1‑140 (MQ=255) aaCACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCt > 1:2848007/1‑140 (MQ=255) aaCACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTAACGGTAAAAGCCGGCGGATCACGCTCGTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCt > 2:3719638/1‑140 (MQ=255) cTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAAc > 1:1339601/1‑140 (MQ=255) aGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACTCTCTTGAGAGGTCCTGCTCACCTGCCTACCGATCAACACCGCGTTAACGgcg > 1:155348/1‑140 (MQ=255) aGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGgcg < 1:4160575/140‑1 (MQ=255) ggCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGACAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGgcgc > 2:153621/1‑140 (MQ=255) ggCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGgcgc > 1:966133/1‑140 (MQ=255) ggCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGgcgc > 2:2562223/1‑140 (MQ=255) gcTCCTTCTGTGTCCATTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCttt < 2:6249509/140‑1 (MQ=255) tCCTTCTGTGTCCAGTGACGGCTATATAGGAGGACAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTGTAACGGCGCTTTgg > 2:3239615/1‑140 (MQ=255) tCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACg > 1:5907294/1‑82 (MQ=255) tCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCt > 2:4697779/1‑100 (MQ=255) tCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCaa > 1:1152735/1‑118 (MQ=255) tCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCaa < 2:1152735/118‑1 (MQ=255) tCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTgg > 1:6032368/1‑140 (MQ=255) ccTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCCCGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGga < 2:1714210/140‑1 (MQ=255) ccTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGga < 2:2872454/140‑1 (MQ=255) tgtgTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGGAGATCt < 1:7391990/140‑1 (MQ=255) tCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGGAGATCTTAca > 1:7582194/1‑140 (MQ=255) tCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGGAGATCTTAca > 2:4257957/1‑140 (MQ=255) cAGTGACTGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTAACGGTAAAATCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACAGCTCAATACCACTTTAACGGCGCTTTGGAGATCTTAaagc > 2:476355/1‑140 (MQ=255) cAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGGAGATCTTAcagc > 2:3900581/1‑140 (MQ=255) tGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGga < 1:1046813/126‑1 (MQ=255) tGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGga < 1:4890455/126‑1 (MQ=255) tGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGGAGATCTTACAGCAgg > 1:2949061/1‑140 (MQ=255) cGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGGAGATCTTACAGCAGGCTg > 2:7102082/1‑140 (MQ=255) gCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGga < 2:6379233/121‑1 (MQ=255) | AACCTTTAAGCAAAATCATGTTGCAGGCATTATTGCCGCAACGAATTACCCGGATCTTGAGGAATATAGCGGCATGAATCACCCAGTCGTTTTTCTGGACAGAACACCTGAAGGCGCTCCTTCTGTGTCCAGTGACGGCTATATAGGAGGAAAATTAGCCGCCGAAGCCATCATTCACGGTAAAAGCCGGCGGATCACGCTCTTGAGAGGTCCTGCTCACCTGCCTACCGCTCAAGACCGCTTTAACGGCGCTTTGGAGATCTTACAGCAGGCTGAAGC > NZ_CP034943/3511712‑3511990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |