| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,539,642 | A→C | 5.1% | L104R (CTG→CGG) | EO946_RS18215 ← | T7SS effector LXG polymorphic toxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,539,642 | 0 | A | C | 5.1% | 1221.4 / 6.1 | 421 | L104R (CTG→CGG) | EO946_RS18215 | T7SS effector LXG polymorphic toxin |
| Reads supporting (aligned to +/- strand): ref base A (152/225); new base C (38/2); total (194/227) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.31e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 422 total aligned reads displayed.
CATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGCCTGTCCC > NZ_CP034943/3539505‑3539779 | cGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCa < 2:4606337/140‑1 (MQ=255) cGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCa < 2:4530260/140‑1 (MQ=255) cGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGAAAAATTCTGATGCTTTCAAGTATCCATTGGGCAGCTCa > 2:3174315/1‑140 (MQ=255) aTCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATc < 2:3021647/140‑1 (MQ=255) aTCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCaaaa < 1:5699133/140‑1 (MQ=255) aTCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTGTTGGTTTTGAGCGGAGACCAATTATGAGGCTTTGCAGTCGCCAATTGGCACCTCAAGATACaaaa > 1:2221468/1‑140 (MQ=255) cccATAGTCGTCAAGCCTGTACCTGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAaag < 1:3880393/138‑1 (MQ=255) tAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGt > 2:5677356/1‑140 (MQ=255) gtcgtcAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGttt < 2:285501/140‑1 (MQ=255) tcgtcAAGCGTGTACCTGTCGAGATCAATAATATCGCTGAGGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTc < 2:6124392/140‑1 (MQ=255) tcgtcAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTc < 1:2308270/140‑1 (MQ=255) tcgtcAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTAATGATCCAAAAAAGAAGTTTc < 1:6973260/140‑1 (MQ=255) tcgtcAAGCGTGTACATGTCGAGATCAATAAGATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTc < 2:1287763/140‑1 (MQ=255) cgtcAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTcc < 1:5450802/140‑1 (MQ=255) gtcAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTGTTTATGAGCGGAGCCAAATTATGAGGCGTTCAAGTCGCCATTGGGCAGGGAATGATCCAAAAAAGAAGTTTGca > 2:844273/1‑140 (MQ=255) gtcAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCca < 2:1570834/140‑1 (MQ=255) aaGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTGTTTATTATCGGGGAAAAATTATGAGGCGTTCAATTCTCCATTGGGGAGCTCATTATCCAAAAAAGAAGTTTAcacaa > 1:1239430/1‑139 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTGTTTATGATCGGAGACAATTTGTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATGAAAAAAAGAATTTTACAAAAATGaa > 1:6520042/1‑140 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTGTTTATGAGCGGCGACAATTTCTGAGGCTTTCAAGTGTCCATTGGGCAGCTCATTATCCAAAAAAGAAGTTTCCACataataa > 1:5273072/1‑136 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTCTTTATGAGCGGCGACAAATTCTTGGGCTTTGAAGTCGCCATTTGGCAGCGCATTTTCACAAAAAGAAAGTTACACAAATGaa > 1:502930/1‑140 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTCTTTATGAGCGGAGACAAATTCTGAGGCTTTAAAGTCTCCATTGGGCAGCTCATTATCCAAAAAAGTAATTTACACATATgta > 1:3663279/1‑138 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTTGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGaa > 2:3610021/1‑140 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTATTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGaa < 2:7667556/140‑1 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATGTCTTCGTTTTGTGCGGGGACACTTTGTGAGGCATTGAAGGCGACCTTGGGGCGCGCATTGTCCAAAAAAGAACGTTCCAACTATgtc > 1:1421162/1‑138 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTGTTGTTTATGTGCGGTGACAAGTTGTGATGCTTTAAACGGTCCATTTGGCCGCTCATGATCCCAAAAATAATTTTGCACATATGaa > 1:1666746/1‑140 (MQ=255) tgtACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTGGTCTTTATTAGCGGAGACAAATTATGAGGCTTTGAAGTCTCCCTTTGGCAGCTCAAGATACAAAAAAGAAGTTTACACCAATGaa > 1:5881182/1‑140 (MQ=255) aTGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCAtt < 1:329697/140‑1 (MQ=255) tGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTCTTGTGTATGAGCGGCGACCATTTGTGAGTCTTTGAATTCTCCATTGGGGAGCTAATGTTCCAAAAAAGAAGTTTGCACATATGAAtaaatc > 1:7146780/1‑135 (MQ=255) gTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTGTTCTTTATGAGCGGAGACAATTTGTGAGGCTTTCAAGGCTCCATTGGGCAGCGCATGATCCAAAAAAGAAGTTTGCACATATGAATCAttga > 2:551358/1‑138 (MQ=255) gTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTGTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAATTTTCCACATATGaaaaaataa > 2:7314264/1‑133 (MQ=255) gTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTTGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATTAATAATTCa > 2:2817204/1‑140 (MQ=255) tCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACat > 2:1102489/1‑127 (MQ=255) gagaTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGAGTTGGTCGTTATGAGCGGGCACAATTTCTGAGGCTTTGAAGTCTCCATTGGGCCGCTCATTATCCCAAAAAAAAATTTCCACAAATGAATGATTCAGtt > 1:735178/1‑140 (MQ=255) aTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCtt < 1:1549033/140‑1 (MQ=255) aTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCtt < 1:258773/140‑1 (MQ=255) aTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCtt < 2:4347404/140‑1 (MQ=255) aTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCtt < 1:6654708/140‑1 (MQ=255) aTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCtt < 2:6597407/140‑1 (MQ=255) aTCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCtt > 2:1273595/1‑140 (MQ=255) tCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCTAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTg < 2:1203389/140‑1 (MQ=255) cAATAATATCGCTGATGCATGACAAAATGGAGTCGATTTCTTCTTTATGAGCGTATACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTAATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGa < 2:6267092/140‑1 (MQ=255) ataataTCGCTGATGCCTGACAAAATGGAGTCGATTTGTTCTTTATGAGCGGAGACAAATTCTGAGGCTTTCAAGTCTCCATTGGGCCGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATAATTAAGTTCTTGAta > 2:1742109/1‑139 (MQ=255) tCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGGCGCTCATGATCCAAAAAAGAATTTTACACATATGAATAATTCAGTTCTTGATCTTTAAt > 2:7034887/1‑140 (MQ=255) tCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAAt < 2:6762103/140‑1 (MQ=255) tCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAAt < 2:1860693/140‑1 (MQ=255) tCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAAt < 1:691358/140‑1 (MQ=255) tCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAAt < 1:5837824/140‑1 (MQ=255) tCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAAt < 1:4969506/140‑1 (MQ=255) gCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGt < 1:427157/140‑1 (MQ=255) gCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGt < 2:1460872/140‑1 (MQ=255) cTGATGCCTGACAAAATGGAGTCGATTTGTTCTTTATGAGCGGAGACAATTTCTGAGGCGTTCAAGTCTCCATTGGGGCGCTCATGATCCAAAAAAGAAGTTTCCACAAATTAATCATTGAGTTCTTTATATTTAAttta > 2:3887144/1‑137 (MQ=255) gATGCCTGACAAAATGGAGTCGATGTGTTCTTTATGATCGGAGACACTTTATGAGGCTTTGAAGTGTCCATTGGGCAGCGCATGATGCAAAAAAGAAGTTTGCACATATGGATAATTGAGTTCTTGATCTTTAATGtctc > 1:4420131/1‑140 (MQ=255) tGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGCGACCATTTCTGAGGCGTTCAAGTGTCCATTGGGCAGCTCATGATCCAAAAAAGTAGTTTCCACCTATGAATCATTGAGTTCTTGATATTTTATGTGTCCTGcaa > 2:4744837/1‑140 (MQ=255) tGACAAAATGGAGTCGATTTATTGTTTATGAGCGGAGACAAATTGTGGGGCTTTGAAGTCTCCATTGGGCCGCAGATGATGCAAAAAAGAAGTTTACACAAATTTATCATTCAGTTGTTGATGTTTTATGTTTGCTTaaa > 2:2467418/1‑140 (MQ=255) aCAAAATTGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATg < 2:1967771/140‑1 (MQ=255) aCAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAAATTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCAAGATCCAAAAAAGAAGTTTCCACATATTAATCATTCAGTTCTTGATATTTAATTTCTCCTGAAAtt > 2:5781106/1‑139 (MQ=255) tGGAGTCGATTTATTCTTTATTAGCGGAGACAAATTCTGAGGCTTTCAAGTCTCCAATGGGCAGCTCATGATCCAAAAAAGAAGTTTACACATATTAATCATTCAGTTATTGATCTTTAATTTATACAGAAATGACCttt > 2:5964989/1‑140 (MQ=255) cGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAAc < 1:915692/140‑1 (MQ=255) tttCTTGTTTATGAGCGGAGACAAATTCTGATGCTTTAAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAATTTTACACATATGAATCATTCAGTTATTGATCTTTAATGTGTCCGGAAAAGACATTTAAAAACGCa > 2:4126416/1‑140 (MQ=255) ttctGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATCTGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGc < 1:6265662/137‑1 (MQ=255) ttctGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGc < 2:5063622/137‑1 (MQ=255) ttATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGc < 1:3031217/140‑1 (MQ=255) ttATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGc < 2:517125/140‑1 (MQ=255) tATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCCAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCa < 1:1839745/140‑1 (MQ=255) tATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCa < 2:397556/140‑1 (MQ=255) tATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCa < 2:7200220/140‑1 (MQ=255) gCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTACTGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGAc < 2:7523582/140‑1 (MQ=255) gCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGAc > 1:1958321/1‑140 (MQ=255) gCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGAc < 2:4791742/140‑1 (MQ=255) gCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGAc < 1:3174315/140‑1 (MQ=255) gCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGAc > 2:2738338/1‑140 (MQ=255) gCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGAc < 2:2071515/140‑1 (MQ=255) gCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTACACAAATGAATCATTCAGTGCGTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGATAc > 2:497379/1‑140 (MQ=255) gCGGAGACAATGTCTGATGCTTTCAACTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATCTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGAc < 1:4858379/140‑1 (MQ=255) gagaCAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAg > 1:6814508/1‑140 (MQ=255) aCAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAgtgt > 1:3457053/1‑140 (MQ=255) ttCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCACTTTGAGCAGAGACAAGTGTcagcc > 1:2138298/1‑140 (MQ=255) ggCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCttt > 1:1064584/1‑140 (MQ=255) tttCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTcga > 2:4393285/1‑140 (MQ=255) tttCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTcga < 2:536117/140‑1 (MQ=255) tttCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTcga < 2:1613322/140‑1 (MQ=255) tttCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTcga < 2:6428990/140‑1 (MQ=255) tttCAAGGCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTcga < 1:4053265/140‑1 (MQ=255) tCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTcgacg > 1:7680444/1‑140 (MQ=255) aaGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGAt < 1:5577862/140‑1 (MQ=255) aGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGAtt < 1:614754/140‑1 (MQ=255) aGTCTCCATTGGGCACCTCATGATCCAAAAAAGAAGTTTCCACATATGACTCATTCAGTTCGTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCGTTCGACGAtt < 1:4750619/140‑1 (MQ=255) gTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGAttt < 1:2691536/140‑1 (MQ=255) tcCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCg > 2:334633/1‑140 (MQ=255) tcCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCg > 1:6062209/1‑140 (MQ=255) tcCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCg > 1:840117/1‑140 (MQ=255) ccATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGc < 1:2818350/140‑1 (MQ=255) ccATTGGGCAGCACATGATCCCAACAAGAAGTTTCCACATCTGAATCATTCACTTCTGCATCTTTAATGTCACCTGAAATGCCCTTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGc < 2:3810575/140‑1 (MQ=255) cATTGGGCAGCTCATGATCCAACAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACACGTGTCAGCCAGCTTTCGACGATTTCCGcc > 2:5416579/1‑140 (MQ=255) aTTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGCCt < 2:6062209/140‑1 (MQ=255) aTTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGCCt < 2:3754089/140‑1 (MQ=255) gggCCGCTCATGATACAAAAAAGAAGTTTCCACATACGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCAATTAAAAACGCACTTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGCCTGTc < 1:3757219/140‑1 (MQ=255) ggCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGCCTGTcc < 2:2278924/140‑1 (MQ=255) gCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGCCTGTccc > 1:6712853/1‑140 (MQ=255) gCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGCCTGTccc > 1:4716567/1‑140 (MQ=255) | CATCGCCCATCTTATCGGCATAGTCGTCAAGCGTGTACATGTCGAGATCAATAATATCGCTGATGCCTGACAAAATGGAGTCGATTTCTTCTTTATGAGCGGAGACAATTTCTGAGGCTTTCAAGTCTCCATTGGGCAGCTCATGATCCAAAAAAGAAGTTTCCACATATGAATCATTCAGTTCTTGATCTTTAATGTCTCCTGAAATGCCATTTAAAAACGCAATTTGAGCAGAGACAAGTGTCAGCCAGCTTTCGACGATTTCCGCCTGTCCC > NZ_CP034943/3539505‑3539779 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |