| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,569,139 | C→T | 100% | M166I (ATG→ATA) | mbl ← | cell shape‑determining protein Mbl |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,569,139 | 0 | C | T | 100.0% | 2049.8 / ‑6.6 | 547 | M166I (ATG→ATA) | mbl | cell shape‑determining protein Mbl |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base T (243/299); minor base G (0/2); total (246/301) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 547 total aligned reads displayed.
GTTGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTACCGCCG > NZ_CP034943/3569002‑3569274 | gTTGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTAt < 2:927817/140‑1 (MQ=255)gTTGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTAt < 1:4732298/140‑1 (MQ=255) aCCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACcgc < 2:4779189/140‑1 (MQ=255) aaTATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGatat > 2:602107/1‑140 (MQ=255) aaTATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGatat > 2:2137742/1‑140 (MQ=255) aaTATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGatat > 2:6969518/1‑140 (MQ=255) aaTATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGatat > 2:7115169/1‑140 (MQ=255) aaTATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAAACGCGatat > 2:5577161/1‑140 (MQ=255) aaTATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTAGCGTTTGAAGTACTTTAAGATTTCCATGTCAAACTTGTGCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCAATTGAAATAACCGCGatct > 1:637501/1‑138 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 1:6038017/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 2:1858833/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 1:3140618/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt < 2:1517661/140‑1 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCcgtcgt > 1:3945159/1‑140 (MQ=255) tctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGACAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAACATCGCCTATTGAAATAACCGCGATATCcgtcgt > 1:3302550/1‑140 (MQ=255) ctGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCgtcgtc > 1:4937412/1‑140 (MQ=255) tGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTcc < 1:290453/140‑1 (MQ=255) tGCAGTACGTTCGCCGATCAGAAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTcc < 1:6534180/140‑1 (MQ=255) tGCAGTACGGTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTcc < 1:5751244/140‑1 (MQ=255) tACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGACTAGGAGGTGACAAAATCGCCTATGGAAATAACCGCGATATCCGTCGTCCCGCCt > 2:3794464/1‑140 (MQ=255) tACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCt > 1:6898649/1‑140 (MQ=255) tACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCt > 1:3684351/1‑140 (MQ=255) cGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTcc > 1:7358668/1‑140 (MQ=255) cGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTcc > 2:2522749/1‑140 (MQ=255) cGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTcc > 2:2329418/1‑140 (MQ=255) cGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTcc > 1:2473429/1‑140 (MQ=255) ggtCGCCGATCATCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 2:3436226/138‑1 (MQ=255) ggtCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:1311774/138‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGCAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:1466419/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGCGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 2:6113513/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 2:6323879/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 2:687989/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:6584171/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 2:3554791/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:7481049/140‑1 (MQ=255) gTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCAGGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:6687056/140‑1 (MQ=255) gTTCGCCGATCAGCAGATTGTACTCGCGTTTGATGTAATTTAAGATGTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 1:1031525/140‑1 (MQ=255) tCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCATCCATTTTTATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGAt < 2:1682744/140‑1 (MQ=255) tCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg > 2:4380935/1‑138 (MQ=255) tCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGAt > 2:5803175/1‑140 (MQ=255) tCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTGAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTcc < 2:39177/130‑1 (MQ=255) gCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGt > 1:7294334/1‑140 (MQ=255) aTCAGCAGCTTGTACTCGCGTTTGATGTTATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTAc < 2:5645962/140‑1 (MQ=255) aTCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTAc < 2:2215326/140‑1 (MQ=255) aTCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTAc < 2:1054963/140‑1 (MQ=255) aTCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTAc < 1:4870703/140‑1 (MQ=255) tCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACa > 1:5550737/1‑140 (MQ=255) cagcagCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACaa < 2:242566/140‑1 (MQ=255) agcatcTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAAc < 2:4996736/140‑1 (MQ=255) cTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGc < 2:3257892/140‑1 (MQ=255) cTCGCGTTTGATGTAATTTAAGATGTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGc < 2:4895002/140‑1 (MQ=255) cgTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTgg > 1:3397110/1‑140 (MQ=255) cgTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTgg > 1:5324826/1‑140 (MQ=255) gTTTGATGTAATTTAAGATTTCCATGTCATACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGc < 2:3136412/140‑1 (MQ=255) gTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGc < 1:4141758/140‑1 (MQ=255) gTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGc < 1:2711510/140‑1 (MQ=255) tttGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCt > 2:2020447/1‑140 (MQ=255) tttGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCAATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCt > 2:4520186/1‑140 (MQ=255) tGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg > 1:5138402/1‑110 (MQ=255) tGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGc > 2:1308055/1‑137 (MQ=255) tGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTgg > 2:834628/1‑140 (MQ=255) tGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTgg > 2:5995651/1‑140 (MQ=255) tGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAat < 2:2749982/140‑1 (MQ=255) aTTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCg < 2:419602/103‑1 (MQ=255) aTTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATAttt > 1:2551725/1‑140 (MQ=255) aTTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATAttt > 1:2140308/1‑140 (MQ=255) aTTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATAttt > 1:1211961/1‑140 (MQ=255) tAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAAc > 2:2846297/1‑111 (MQ=255) tAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCa < 1:1680837/140‑1 (MQ=255) tAAGAGTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCa < 1:5917115/140‑1 (MQ=255) aCTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCTACCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTACCATACCCGCGCCTATAGCg > 2:4084767/1‑140 (MQ=255) aCTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCAGCGCCGATAGCg < 1:7085501/140‑1 (MQ=255) cTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCgg < 1:699161/140‑1 (MQ=255) ttGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGc < 2:7306996/140‑1 (MQ=255) tGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGAt > 1:4609095/1‑82 (MQ=255) tCCCCACACATTTTAATAGAAGACGAGGTGACAATATCTCCTAGTGAAATAACAGCGATATCCTACGTCCCGCCTCCGATGTCTACAAAAATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCAATAGCGGAAAc > 1:6264941/1‑140 (MQ=255) gCCATTTTAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAgg > 1:2266431/1‑140 (MQ=255) ttttAATAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGttct > 1:2778109/1‑140 (MQ=255) aaTAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGttcttctt < 2:5404199/140‑1 (MQ=255) aaTAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGttcttctt < 1:2196565/140‑1 (MQ=255) aaTAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGttcttctt < 1:928166/140‑1 (MQ=255) aaTAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGttcttctt < 2:6517884/140‑1 (MQ=255) aaTAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTGACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGttcttctt < 1:3844657/140‑1 (MQ=255) tAGACGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 1:96836/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 2:6644691/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 2:5844662/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 2:7421287/140‑1 (MQ=255) tAGAAGAGGAGGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCa < 1:7589980/140‑1 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATACCCGCGATATCCGTCGTCCCGCCTCCGTTGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCACCTTTAGGTTCTTCTTCAAGGtc > 1:846200/1‑139 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTa < 1:4324321/140‑1 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTa > 1:3520944/1‑140 (MQ=255) gaggagGTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTa > 1:4381842/1‑140 (MQ=255) ggaggTGACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTaca < 2:2972907/140‑1 (MQ=255) gACAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGtt < 2:5261789/119‑1 (MQ=255) aCAATATCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGttt > 1:6804451/1‑140 (MQ=255) tatCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGc > 2:2570073/1‑71 (MQ=255) tatCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTAccg < 1:1849133/140‑1 (MQ=255) tatCGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTAccg > 2:7595168/1‑140 (MQ=255) cGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACaa < 2:1594949/51‑1 (MQ=255) cGCCTATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTAccgccg > 2:1442198/1‑140 (MQ=255) | GTTGCGACTTTAACCTTAATATCTTCTGCAGTACGTTCGCCGATCAGCAGCTTGTACTCGCGTTTGATGTAATTTAAGATTTCCATGTCAAACTTGTCCCCAGCCATTTTAATAGAAGAGGAGGTGACAATATCGCCCATTGAAATAACCGCGATATCCGTCGTCCCGCCTCCGATGTCTACAACCATGTTACCGCTTGGCTGGAATATTTCCATACCCGCGCCGATAGCGGCAACTTTAGGTTCTTCTTCAAGGTACACATGTTTACCGCCG > NZ_CP034943/3569002‑3569274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |