| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NZ_CP034943 | 607,424 | 27 bp→GGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGT | 47.1% | coding (267‑293/1125 nt) | EO946_RS03185 → | collagen‑like protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 607423 | 177 (0.560) | 22 (0.510) +GGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGT |
11/36 | NT | 47.1% | coding (266/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607451 = | 186 (0.590) | coding (294/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
GGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607379‑607423‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGACCAGCCGGAGCGACAGGAGCGACAGGAG > NZ_CP034943/607451‑607482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| cGGAGCTCCCGGCGCTCCCGGCGCAGCCGGACCAACCGGAGCGACCGGAGCCACCGGGCCTTCTGGGGACGTCGGACCTCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGG < 1:1141252/139‑1cGGAGCGCCCGGCGCACCCGGCGCAGCCGGCCCACCCGGAGCGACGGGAGCCACCGGGGCTACTGGGCACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGG < 1:3819007/139‑1 CTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGG < 1:1141320/54‑1 CTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGG > 2:1141320/1‑54 cggggaAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAC < 1:2337184/134‑1 gaatCCGGACCAAACGGAGCCACGCGAGCCACAGCCGCTACTGGGGAGGTCGGACCATGCGGCGCGACAGCAGCTACCGGTGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGC < 1:4930486/136‑1 gaAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCGGGGCGACTGGGGCCGTCGGACCAGC > 2:4952358/3‑140 gaAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGC > 2:743612/3‑140 gaAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACAGGGTAAGTCGCACCAGC > 1:60280/3‑140 aAGCCGGACCAACCGGAGCGACGGGAGCCACCGGGGCTACGGGCGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCGGGAGCCACCGGGGCGACAGGGGACGTCGGACCAGCC > 1:941692/2‑140 aAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCC > 1:4722714/2‑140 aAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCC < 2:155979/139‑1 cCCGGCCCAGCCGGAGCTACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGG < 1:422033/139‑1 cCCGGAGCAACCGGCGCGACGGGAGCCCCAGGTGCTTCTGGTGCCCACGGAGCCCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGG < 1:4877288/139‑1 GCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGG < 1:2208822/140‑1 GCCGGACCAACCGGAGCGACGGGAGCCCCAGGGGCTACTGGGGACCTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGG < 1:4039003/140‑1 GCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGG > 2:3088322/1‑42 CCGGACCAACCGGAGCGACGGGAGCCACTGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGCAGAGACAGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGATGCTCCTGGGGACGTAGGACCAGCCGGA > 2:4498074/1‑140 CCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACGGGGGCGACTGGGGCCGTCGGACCAGCGGGA > 2:603939/1‑140 CCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGA > 2:5011269/1‑140 CGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGATGGGAGCCACAGGGGCTACAGGGGACGTCGGACCAGCCGTAG > 2:1954615/1‑140 ACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGCACCAGCCGGAGCGA > 1:959244/1‑140 CCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAC < 1:4960287/140‑1 CCAACCGGAGCGACGGGAGCCACCGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTA < 2:4690226/67‑1 CCAACCGGAGCGACGGGAGCCACCGGGGCTACGGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTA > 1:4690226/1‑67 ccccccGCGACCGGAGCCACAGGCGCTACTGCGGAAGTCGGCCCCGCCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGG < 1:875431/134‑1 ACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGG > 2:2154726/1‑140 ACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGG < 1:3596113/140‑1 CGGCGCGACGGGAGCCACCGGTGCTAGTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAG < 1:2677629/140‑1 CGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCGGGGCGACTGGGGACGTCGGACCAGCCGGAGCGACAGGAG > 2:3498167/1‑140 CGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAG < 1:515065/140‑1 ACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGG > 1:3599039/1‑140 ccgcAGCCACCGGCGCTACTGGGGACGTCGGACCACCCGCAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACGGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGg < 2:4287651/136‑2 CGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGg < 2:68880/140‑2 CGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGCGCAACAGGGGACGTCGGACCAGCCTGAGCGACAGGAGCTACcagg > 2:2204867/1‑136 GGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGCACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGcg > 2:1698337/1‑138 GGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCGACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGgg > 2:1698323/1‑138 GCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCT > 2:104199/1‑93 GCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCT < 1:104199/93‑1 GCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCT > 2:4572608/1‑93 GCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCT < 1:4572608/93‑1 ACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAG < 1:3236915/46‑1 ACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAG > 2:3236915/1‑46 GACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACG > 2:4979495/1‑60 GACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACG < 1:4979495/60‑1 GACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAC < 1:4740928/50‑1 GACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAC > 2:4740928/1‑50 CGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCC < 2:1526779/61‑1 CGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCC > 1:1526779/1‑61 CGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGA > 2:2325032/1‑53 CGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGA < 1:2325032/53‑1 ACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAG > 2:91901/1‑47 ACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAG < 1:91901/47‑1 ACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAC < 2:2063267/42‑1 ccACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGG > 1:2618255/3‑62 ccACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGG < 2:2618255/60‑1 ACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACgg > 2:31847/1‑47 AGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAG > 2:1454241/1‑47 AGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAG < 1:1454241/47‑1 CTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGG > 2:3818276/1‑45 CTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGG < 1:3818276/45‑1 ACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCAC < 2:2175980/38‑1 ACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCAC > 1:2175980/1‑38 GGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGG > 2:4091790/1‑36 GGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGG < 1:4091790/36‑1 GCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGG < 1:3088322/42‑1 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| GGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607379‑607423‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGACCAGCCGGAGCGACAGGAGCGACAGGAG > NZ_CP034943/607451‑607482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |