| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 634,086 | G→T | 6.2% | S562* (TCA→TAA) | EO946_RS03330 ← | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 634,086 | 0 | G | T | 6.2% | 734.8 / 3.1 | 286 | S562* (TCA→TAA) | EO946_RS03330 | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (66/189); new base T (28/2); total (94/192) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.55e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 289 total aligned reads displayed.
TTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCTATATGGT > NZ_CP034943/633947‑634221 | ttGATAGATGTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg < 1:4896862/140‑1 (MQ=255) tGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGa < 1:1172734/140‑1 (MQ=255) tGATACATTTCCGGAACACATAGCAATTCATCTGTATGAGTAATGTTTTCTTCAATGGTTTGAACAGTGTCTTAAATTTCTTCAAGCCGACGTAGTCGTTGGCGTTATTTCTTTTTCCATTCTTTTTCTTCTTCATATGa < 1:3777321/140‑1 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCATTATTTTTATtattaatattaaacttt > 1:1960698/1‑135 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGttt < 2:809781/140‑1 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTAATATGAACGttt > 2:1866283/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTTGATTGTTTTTGTTGTTGTTATGTAAGtttt > 2:1370055/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTGCAATCTTTTTATTCTTAATATGAACGtttt > 2:3875161/1‑140 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:2393174/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:722260/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:809909/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGGTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGCCGGAGTCGTTGGCGTTCTTTCTTGTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 2:3287805/140‑1 (MQ=255) ggATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTGTTTTTGGGTTCTTTTTGTTGTTGATATGTAAGtttttggtg > 1:3036292/1‑135 (MQ=255) ggATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGGTTGTTTTTGCCTTATTTTTGTTGTTCATATGTACCttttttgtc > 1:176440/1‑135 (MQ=255) caTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTGCATTATTTTTGTTGTTGAAATGGACGTTTTTATTAAGGCtt > 1:2327567/1‑140 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAAc < 2:585397/140‑1 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAAc < 2:791060/140‑1 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCCATTCTTTTTATTCTTAATATTAACGTTTTGAGTCAGGCTTAACCGAAg > 2:1572807/1‑140 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTGTTTTTTGTGTTGATATTTACGTTTTTTGTGAGGCTTAAACGAAg > 1:1661003/1‑140 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTGGTTGTTTTTGGAGTGTTTTTGTTGGTCATATTGAAGTTTTTTGTGAGGGTTatacgcag > 1:2663035/1‑133 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCGTCAATTTCTTCAATCCGACGGAGTCGTTTGGGGTCTTTCTGTTTACCTTCTTTTTGTTGTTCATATGGACGGGTTTCGTCAGGCTTAACCCAAg > 1:39654/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTCTTTTTACATTCTTTTTCTTCTTCATATGAACGGTTTTAGTGAGGCTTAACCGAAGCa > 1:929390/1‑140 (MQ=255) cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTGTTTGCCCTCTTTTTGTTGTTAATATGAAACTTTTTAGTCAGGCGTAAACGAAGCAGGc > 1:1196115/1‑140 (MQ=255) ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCGTTGTTTTTGCATTATTTTTGTTATTGATATTAACGTTTTTAGTGAGGCTTTACCGAAGCCCGCGt > 1:4961020/1‑140 (MQ=255) ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTTTTTTTGCAATGTTTTTGTTGATCATTATAAAGTTTTTTGTTAGGGTTTAACGAATCAGGCGt > 1:3843843/1‑140 (MQ=255) aTGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTCTTTTTTGATTCATTTTTTTGTTGATATTTACGGTTTTAGTGAGGCTTAAACGAAGCAAGCCttt > 1:4545905/1‑140 (MQ=255) tGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTGGAATATTTTTATTGATTAGATTAACGGTTTGTGTGAGGGATAAAAAAAACAGGCGtttt > 1:4094336/1‑140 (MQ=255) tGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGGTTGTTTTTTGCTTGTTTTTTTTGTTGATATTGACGTTTTTTGTGAGGCTTAAAAGAAGGACGCGgttt > 1:2930740/1‑140 (MQ=255) gACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGttttt < 2:4700981/140‑1 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt < 2:3801319/140‑1 (MQ=255) ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTATTTTTGCAATCTTTTTATTCTTCATATGAAAGTTTTTAGTCAGGCTTAAAACAAACAGGCGTTTTTTCGGATTGct > 2:3348317/1‑140 (MQ=255) tcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTACTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTg < 1:4689538/140‑1 (MQ=255) aaTGTTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCATTATTAACCTAATTATTATTTTTTTCGGATTCCTCTTgat < 2:2703834/140‑3 (MQ=255) tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCATTCTTTTTAGTCTGGATATGAAGGTTTTGAGTCAGGGTTAACCGAAGCAGGCGGTTTTTCGGCTTGCTCTTGCtgattgat > 1:5162862/1‑140 (MQ=255) tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGtttttt > 2:4724305/1‑118 (MQ=255) aatGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct < 1:1538314/138‑1 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGGTTGTTTTTGCATTGTTTTTGTTCTTGAAATGAAAGTTTTGAGTGAGGGTTAAACGCAGCAGGCGTTTTTTTGGATTACTGTTTGTGATTAAatttatgc > 2:494478/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTGTTTTTACATTATTTTTGTTCTTCATATTAACGTTTTTAGTCAGGCTTAACCGAATCAGGGGTTTTTTAGGATTACTCTTTGTGATTCAttttataa > 2:720878/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTACATTCTTTTTCTTCTTCATATGTAAGTTTTGAGTCAGGGTTAACCGAAGCAGGCGTTTTTTCGGGTTACTATTTGTGAGTAATTTTCTcc > 2:4151753/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTATTTTTCCAGTGTTTTTGGTGTTCATATGAAACTTTTTTGTCAGGCTTTACCGAAGCAGGCGTTTTTTGGGGTTGCTCTTTGTGATTCAATTTCTcc > 2:1184871/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTGTTTTTATTGTTCATATTAACGTTTTGAGTCAGGCTTAAACGAAGCAGGGGTTTTTTAGGATTACGCTTGGTGGTTCAttttgtgc > 2:2515023/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTACATTCTTTTTGTTCTTCATATGAACGTTTTGAGTCAGGCTTAAACCAAACAGGCGTTTTTTGGGATTGCGCTTTGTGATTGAttttgtgc > 2:3994505/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTAGTTTTACAATCTTTTTGTTCTTCATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTCCTCTTTCTGATTAATTTTCAcc > 2:3582862/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCGTTGGTTTTCCATTGTTTTTCTTCGTAATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGGTTTTTAGGATTCCTCGTTCTGTTTAAATTTGTcc > 2:2560975/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTGGTTTTGGGTTCTTTTTGTTGGTGATTTGAACGTTTTTAGTGAGGCTTAACCCGAGCAGGCGGTTTTTGGGGTTGCGCTTGGTGATTGAgtttgtgg > 1:4729732/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGGTTTGTTTTTCCATTCTTTTTGTTGTTGAAATTTACGTTTTTTGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGGTTGCTCTTGGGGATTGATTTTATcc > 1:2429530/1‑140 (MQ=255) cTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAt < 1:4058091/140‑1 (MQ=255) aTTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTGCATTCTTTTTCTTCTTCATATGAAAGTTTTTAGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTGCTATTGCGGATTGATTTTGTACCATTCAAg > 2:4195459/1‑140 (MQ=255) cttcAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTACCTTCTTTTTGTTGTTCATATGTACGGTTTGTGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTGCTCGTGCTGGTTGATTTTATCCAATTCAAgctgg > 2:3613274/1‑139 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:2803903/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 1:3348317/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 1:4527859/140‑1 (MQ=255) ttcAATCCGACGGAGTCGGTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCCGGCTTAACCGAAGCAGGCGTTTGTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:4967698/140‑1 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:3397105/140‑1 (MQ=255) cGGAGTCGTTGGCGTTCTTTATTTTTCCTTTCATTTTCGTATTCATCAGACCGTTTTGAGTCAGGCTTACCCGACGCAGGCGTTTTTGCGGATTCATCTTGCTGATTCATTTTCTCCTATTCAAGCTGCTCTGttttttt < 2:5115047/140‑1 (MQ=255) cGGAGTCGTTGGCGTTCGTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:4748183/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 2:690979/140‑1 (MQ=255) aGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtctc < 2:4534451/140‑1 (MQ=255) tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 2:425235/140‑1 (MQ=255) tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 2:3217691/140‑1 (MQ=255) ttGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtat < 2:1624367/140‑1 (MQ=255) tGGAGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTCGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtata < 2:478608/140‑1 (MQ=255) ggCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa < 2:1843506/140‑1 (MQ=255) gTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTAtaataa < 2:2327567/140‑1 (MQ=255) ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa < 2:2927786/140‑1 (MQ=255) ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTATTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa < 2:129999/140‑1 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCTTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:5215242/140‑1 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:3672214/140‑1 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:3378230/140‑1 (MQ=255) ctttTTCCATTCTTTTTCGTCTTCATATGAACGTTTTGAGTCAGGCTTAAGCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:906415/140‑1 (MQ=255) cttcgtCCATGCTATCTCTTCTCCCTATGACCGTTTAGAGTCAGGCGGACCCGAAGCAGCCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAGTCAAGCTGCTCTGTTTTTTTCTGCGTATAATAATCGTAAt < 2:3544496/135‑1 (MQ=255) cATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAg > 2:3400366/1‑140 (MQ=255) aTTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGa < 2:176440/140‑1 (MQ=255) aTTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGa < 2:4238332/140‑1 (MQ=255) aTTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGa < 2:3036292/140‑1 (MQ=255) aTTCTTTTTATTATTCATATCATCGTTTTGAGTCAGGCTTAACCTAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATATTCGTAATCTCCCAGa < 2:2055939/140‑1 (MQ=255) ttCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGAt > 2:103073/1‑140 (MQ=255) ttCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTATCCGTATAATAATCGTAATATCCCAGAt > 1:3139168/1‑140 (MQ=255) tCTTTTTCTTCTTCATATTAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:1370800/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGCACGTTTTGAGTCAGGCTTACCCGCAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:2091499/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:3327538/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:4494132/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTCTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:2215518/140‑1 (MQ=255) tCTTTTTCTTCTTCAGATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:2516281/140‑1 (MQ=255) tttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 2:1263959/140‑1 (MQ=255) tttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:3049144/140‑1 (MQ=255) tttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 2:3322764/140‑1 (MQ=255) tttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 2:3186614/140‑1 (MQ=255) tttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 2:2426653/140‑1 (MQ=255) tttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 2:3714625/140‑1 (MQ=255) tttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCAGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:1059922/140‑1 (MQ=255) tttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa < 2:1093683/116‑1 (MQ=255) ttcttcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCta > 1:4238976/1‑140 (MQ=255) tcttcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCtat < 1:2730231/140‑1 (MQ=255) tcttcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCtat < 1:1816429/140‑1 (MQ=255) tcttcATATGAACGTTTTGAGTCAGGATTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCACAGATACTCTTCtat < 1:4204191/140‑1 (MQ=255) cttcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCtata < 2:4899657/140‑1 (MQ=255) tcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTATTCTATATg > 2:4434296/1‑140 (MQ=255) tcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATAGTAATATCCCAGATACTCTTCTATATg > 1:2816988/1‑140 (MQ=255) tcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATAGTAATATCCCAGATACTCTGCTAtgtg > 1:3598784/1‑140 (MQ=255) | TTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCTATATGGT > NZ_CP034943/633947‑634221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |