| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 924,135 | A→T | 5.4% | intergenic (+10/+41) | EO946_RS04760 → / ← spo0M | tRNA‑Leu/sporulation control protein Spo0M |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 924,135 | 0 | A | T | 5.4% | 918.1 / 4.6 | 298 | intergenic (+10/+41) | EO946_RS04760/spo0M | tRNA‑Leu/sporulation control protein Spo0M |
| Reads supporting (aligned to +/- strand): ref base A (117/160); new base T (19/2); total (136/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.38e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 316 total aligned reads displayed.
ATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGACACGTACGAGCTGTT > NZ_CP034943/923998‑924273 | aTCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGc > 2:4762937/1‑140 (MQ=255)aTCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGc > 2:3367168/1‑140 (MQ=255)aTCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGc > 2:222145/1‑140 (MQ=255) ccATGTTATATTTAGATTCGTCGGTTAGATACGACGTAAAACTTGCCGGGGTGGCGGAATTGGCAGACGCGCACGACTCAAAAGCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGAGCACCGGGATCCTGACATAGccg > 1:3824556/1‑139 (MQ=255) ccATGATCTATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAATGccc > 2:1490164/1‑140 (MQ=255) ccATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAATGccc > 1:1492021/1‑140 (MQ=255) ccATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGccc > 1:4958008/1‑140 (MQ=255) ccATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGccc < 2:1619653/140‑1 (MQ=255) ccATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGccc < 2:4958008/140‑1 (MQ=255) ccATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGccc < 1:2412061/140‑1 (MQ=255) ccATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGccc > 1:3505354/1‑140 (MQ=255) atatatTTATATTCGTCGGTTCGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTc < 1:5002552/140‑1 (MQ=255) tatatttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCt < 1:1013229/140‑1 (MQ=255) atttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTtat > 1:2210265/1‑140 (MQ=255) atttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTtat > 1:2063109/1‑140 (MQ=255) atttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTtat > 1:2743730/1‑140 (MQ=255) atttatattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTtat > 2:3865389/1‑140 (MQ=255) atattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACat > 2:62164/1‑139 (MQ=255) atattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAg > 2:2183693/1‑140 (MQ=255) atattCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGGATACTGAAAAAGCCCGTTTCTTATACat > 2:2645885/1‑139 (MQ=255) attCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGc < 1:2638151/123‑1 (MQ=255) ttCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACAACCGGTATACTGAAAAAGCCCGTTTCTTATACAGaaa > 1:4103656/1‑140 (MQ=255) cgtcgGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAATGCCCGTTTCTTATACAGAAACg > 2:3120234/1‑140 (MQ=255) cgtcgGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACg > 2:2821270/1‑140 (MQ=255) tcgGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACggg > 2:5184150/1‑140 (MQ=255) tcgGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACggg > 1:3936749/1‑140 (MQ=255) ggTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGtt < 2:1801941/140‑1 (MQ=255) gacgTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAATGCCCGTTTCTTATACAGAAACGGGtttttattttta > 2:4020749/1‑140 (MQ=255) acgTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTttttatttttat > 1:2330218/1‑140 (MQ=255) acgTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTttttatttttat < 2:2063109/140‑1 (MQ=255) acgTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTgtttattgttat > 1:4768581/1‑140 (MQ=255) aaaCTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTc < 2:776561/140‑1 (MQ=255) aaCTTGCCGGTGTGGCGGAATGGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCa < 2:1094353/140‑1 (MQ=255) ctggCCGGGGTGGCGGAATTGGCAGACCCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATAATGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACt < 2:3934140/137‑1 (MQ=255) cTTGCCGGTGTGGCGTAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACt < 1:4031514/140‑1 (MQ=255) cTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACt < 2:132888/140‑1 (MQ=255) cTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACt < 2:328532/140‑1 (MQ=255) cTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGGTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACt < 2:4687287/140‑1 (MQ=255) tGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCa < 1:4240218/140‑1 (MQ=255) gCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAATGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAg > 2:2466052/1‑140 (MQ=255) gCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACATAAACGGGTTTTTATTTTTATAATTCACTCAg > 1:184118/1‑140 (MQ=255) gCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAg > 1:4329963/1‑140 (MQ=255) gCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAg > 1:708908/1‑140 (MQ=255) gCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAg > 1:2172246/1‑140 (MQ=255) gCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAg > 1:186213/1‑140 (MQ=255) gtgtGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTa < 1:2821270/140‑1 (MQ=255) gtgtGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTa < 1:3120234/140‑1 (MQ=255) gtgtGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAAGTCACTCAGCGTa < 1:5184150/140‑1 (MQ=255) tgGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTg < 2:129413/140‑1 (MQ=255) cGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTc > 1:744001/1‑140 (MQ=255) ggAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCt < 2:2407878/140‑1 (MQ=255) ttGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCATCGTATTGGTCTATGa > 2:438073/1‑140 (MQ=255) ttGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGAACACAGGTATACTGAAAAAGCCCGTTTCTTATACAGAAAAGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGa < 1:1287800/140‑1 (MQ=255) tGGCAGACGCTCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAACAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGAt < 2:3202571/140‑1 (MQ=255) tGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGAt < 2:4440478/140‑1 (MQ=255) tGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGAt < 2:1126642/140‑1 (MQ=255) ggCAGACGCGCACGACTCAAAATCGTGTTCCTTGTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGAtc < 2:1502502/140‑1 (MQ=255) ggCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGAtc < 2:869013/140‑1 (MQ=255) gCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGAtct < 1:3865367/140‑1 (MQ=255) cAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGAtctc < 2:3756248/140‑1 (MQ=255) cgcgCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCtcttct > 1:647180/1‑140 (MQ=255) cACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTa < 2:3482384/140‑1 (MQ=255) cACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTa < 1:2229054/140‑1 (MQ=255) cACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTa < 1:1435684/140‑1 (MQ=255) aCGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTAc < 1:4057552/140‑1 (MQ=255) aaaaTCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTa < 1:3367168/140‑1 (MQ=255) aaaaTCGTGTTCCTTATGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTa < 1:2989374/140‑1 (MQ=255) aTCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGc < 1:3270405/140‑1 (MQ=255) tgtTCCTTCTGTATTGTCGGTTCGACCCAGACCACAGGTATACTGAAAAAGCCCGTTTATTATAAAGAAAGGGGTTTTTATTTTTATAATTCACTCATATTATTTGTCTATCATATCTTCTATTACCTCTTTAAGCtctt > 2:4277002/1‑140 (MQ=255) tgtTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTc < 1:808899/59‑1 (MQ=255) tgtTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCtctt > 1:1169835/1‑140 (MQ=255) tgtTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTAGACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGAATTGGTCTATGATCTCTTCTAGTACCTCTATAAGctggt > 2:5142109/1‑137 (MQ=255) tCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTg < 1:914061/140‑1 (MQ=255) tCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTg < 1:3409425/140‑1 (MQ=255) ccTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGc < 2:1392731/140‑1 (MQ=255) cTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCa < 2:1051285/140‑1 (MQ=255) cTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCa < 2:4153036/140‑1 (MQ=255) tCTGGAGTGTCGGTTCGAACCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGCTCTCGTCTAGTACCTCTTTAAGCTCTTCTGCCTc > 2:4888288/1‑140 (MQ=255) gtgtCGGTTCGACCCCGACCAGCGGTATCCCGAAAAAGCCCGTTTCTTATACAGAACCGGGTTTTTATTTGTATAAGTCACTCAGCGTATTGGTCTCTGAGCTCTTCTCGTACCACTTTAAGCTCTGCTGCCTCTTGAAg < 2:3405569/140‑1 (MQ=255) gtgtCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAg < 1:1572656/140‑1 (MQ=255) gtgtCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAg < 1:339297/140‑1 (MQ=255) gtgtCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAg < 1:3774718/140‑1 (MQ=255) gtgtCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAg < 1:4495756/140‑1 (MQ=255) gggtCGGTTCGACCCCGACCACCGGTATACAGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAg < 1:2685636/138‑1 (MQ=255) tgtCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGc > 2:4132119/1‑140 (MQ=255) tCGGTTCGACCCCGACCACCGGTATACTGAAAATGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCACGctc > 1:1084906/1‑140 (MQ=255) tCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGctc > 2:2526637/1‑140 (MQ=255) tCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGct < 1:4719501/139‑1 (MQ=255) tCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGct > 2:4719501/1‑139 (MQ=255) aCCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTAtt > 1:5120259/1‑80 (MQ=255) aCCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTAtt < 2:5120259/80‑1 (MQ=255) aCCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGc < 2:1849030/140‑1 (MQ=255) cGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGaca > 2:3110199/1‑140 (MQ=255) taCTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGACACGTAc < 2:300885/140‑1 (MQ=255) tGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGACACGTACGAg < 1:2491920/140‑1 (MQ=255) aaaaaGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGACACGTACGAGCt > 1:319048/1‑140 (MQ=255) aaaaaGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGACACGTACGAGCt > 1:2892751/1‑140 (MQ=255) aaaaGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGACACGTACGAGCTg > 2:377780/1‑140 (MQ=255) aaaGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGACACGTACGAg < 1:4568006/136‑1 (MQ=255) aaaGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGACACGTACGAg > 2:4568006/1‑136 (MQ=255) | ATCCATGATATATTTATATTCGTCGGTTAGATACGACGTAAAACTTGCCGGTGTGGCGGAATTGGCAGACGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTATACTGAAAAAGCCCGTTTCTTATACAGAAACGGGTTTTTATTTTTATAATTCACTCAGCGTATTGGTCTATGATCTCTTCTAGTACCTCTTTAAGCTCTTCTGCATCTTCAAGCTCTGATTGGCTGAAGCGGACACGTACGAGCTGTT > NZ_CP034943/923998‑924273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |