| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 986,801 | G→T | 10.3% | D372Y (GAT→TAT) | spoVR → | stage V sporulation protein SpoVR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 986,801 | 0 | G | T | 10.3% | 657.4 / 14.1 | 283 | D372Y (GAT→TAT) | spoVR | stage V sporulation protein SpoVR |
| Reads supporting (aligned to +/- strand): ref base G (114/125); new base T (2/39); total (116/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.54e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 290 total aligned reads displayed.
GCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCATTGGT > NZ_CP034943/986664‑986939 | gCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGAt > 2:3717129/1‑140 (MQ=255)gCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGAt > 2:3872498/1‑140 (MQ=255) tGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATtat > 1:4896869/1‑140 (MQ=255) aaGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATaa > 2:2136246/1‑140 (MQ=255) aaGCCTGGCTCAGGCAGGGAGAAAATGTGTGACGTCCGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATTCGCGAGGATCTTTATTATTTTCAAAAAAAGGGATGAGAtaataa > 2:1650894/1‑140 (MQ=255) tGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAtcg > 2:2412014/1‑140 (MQ=255) tGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAAGTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAtcg > 2:1971067/1‑140 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 2:4511647/140‑1 (MQ=255) gcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACaaa > 1:1960663/1‑140 (MQ=255) caggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAg < 2:3423263/140‑1 (MQ=255) caggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAg < 2:1354703/140‑1 (MQ=255) aggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAAAAAAAGACCTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGa < 2:3583444/140‑1 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 1:1563037/1‑140 (MQ=255) agaAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATgg < 1:2378285/140‑1 (MQ=255) agaAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATgg < 1:911031/140‑1 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCTTCGACAAAGAATGGAAAt > 1:2696909/1‑140 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt > 1:2152485/1‑140 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt < 2:490169/140‑1 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt < 2:605373/140‑1 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt < 1:1789262/140‑1 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAAt > 1:2045352/1‑140 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATAGTCGACAAAGAATGTAAAt > 1:4117923/1‑140 (MQ=255) tCAGGTAAATTGAATCCGATATCTCTTTCATCCGCAATTAATTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:4365270/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:1563037/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:129306/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:36633/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:809418/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:279809/140‑1 (MQ=255) aGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGATATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAcaa > 2:1438174/1‑138 (MQ=255) aGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCa > 1:666372/1‑140 (MQ=255) aGGGAAATTGAATCAGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCa > 1:4729995/1‑140 (MQ=255) ggAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGc < 2:2631360/140‑1 (MQ=255) aTCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCa < 1:982853/140‑1 (MQ=255) tCCGATATCTGTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCTCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCAt > 2:670790/1‑140 (MQ=255) tCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAATGAATGGAAATCGGTAAGCGACCAGCTCGTGAGCAt > 2:1871026/1‑140 (MQ=255) tCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc > 2:3489064/1‑126 (MQ=255) tCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:3489064/126‑1 (MQ=255) tCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATAGGTACGCGACCAGCTCGTGAGCAt > 1:3215862/1‑140 (MQ=255) ccGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATg < 1:4435580/140‑1 (MQ=255) ccGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATCCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATg < 1:4784580/140‑1 (MQ=255) tCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCggg > 2:862632/1‑140 (MQ=255) ccGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGt < 2:3810761/140‑1 (MQ=255) cGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAAcgg < 1:2569643/134‑1 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 1:3398958/140‑1 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 1:189564/140‑1 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt > 1:1207076/1‑140 (MQ=255) cAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGCTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTc > 2:1200547/1‑140 (MQ=255) aaTTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTcc > 2:319743/1‑140 (MQ=255) aaTTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTcc > 2:4323095/1‑140 (MQ=255) aaCAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGa < 2:1303247/140‑1 (MQ=255) tatttATGCGCGAGGTTGTTTTTTTGTTTCAAAAAAAGGGCAGATATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCCGCTCGTGAGCATGCGGGTAACCGGCGGGTTTCCATATTTGACAGTAAacgac < 2:2277503/137‑1 (MQ=255) tGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGAt > 2:2737094/1‑140 (MQ=255) tGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGAt > 2:2330366/1‑140 (MQ=255) tGCGCGAGGATCTTTATTTGTTTAAAAAACAGTGAAGATATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGTCGGGTTTCAATATTTGACAGTAAACGACGGTGAt > 2:307992/1‑140 (MQ=255) gcgcGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCa > 2:1216665/1‑92 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa > 1:3996330/1‑55 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGa < 2:1063697/121‑1 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTa > 2:4938914/1‑140 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGAGTa > 2:721426/1‑140 (MQ=255) aGGATCTTTATTTGTTTCAAAAAAAGGCCAGAGATTATAAAATAGTCTACAAAAAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGTTAAAATGAGGGTGTCCATATTTGACAGTAAACGAAGGTGAATACATg > 2:292453/1‑140 (MQ=255) tttATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAAt > 2:2033892/1‑140 (MQ=255) ttttttGTTTAAAAAACTGGGAATAGATTATAAAATCGTCGACAAATAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCCATTTTTGACATTAAACGACGGTGATTACATGAAAAATa < 2:1949222/137‑1 (MQ=255) ttATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATa > 2:1110293/1‑140 (MQ=255) ttATTTGTTGCAAAACCAGGGCTGAGATAATAAAATCTTCGACAAAGAATGGAAATCGGTACGCGACCAGATCGGGAGCATCCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATa < 2:3259838/140‑1 (MQ=255) ttATTTGTTACAAAACCCGGGCCGAGATTATAAAATCGGCGACAAAGAATGGAAATCGGTACGCGACAAGCTCGTCAGCATGCGGTAAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATa < 1:5088346/140‑1 (MQ=255) ttttGTTAAAAAAACAGGGCAGATATTATAAAATCTTCTACAAACAATGCAAATCGTTACGCCACCAGCTCGTGAGAATGCGGTTAAACGGCGGGTTTCCATATTTGACCGTAAACGACGGTGATTACATGAAAAATAAc < 1:2009329/139‑1 (MQ=255) aTTTTTTTAAAAAACTGGGCAGATATTAAAAAATCGTCTACAAAGATTGGAAATCGGTACGCGACCAGCTGTTGAGCATGGGGGTAAACGGCGGGTTTCCATTTTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:103526/140‑1 (MQ=255) aTTTTTTTAAAAAACCGGGCAGAGTTTATAAAATCGTCGACAAATAATGGAAAGGGGTACGCGACCAGCTCTTGAGAATGCGGTTAACCGGCGGGTTTCAATATTTGACATTAAACGACGGTGATTACATGAAAAATAAc < 1:4323095/140‑1 (MQ=255) aTTTTTTTAAAAAACAGGGCAGATTTTATAAACTCGTCGACAAAGATTGGAAATCGGTACGCGACCAGCTGGTGAGAAGGGGGGTAAACGGGGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:2454737/140‑1 (MQ=255) aTTTTTTTAAAAAACAGGGCACCTTTTATAAATCCGTCCAAAAATAATGCAAATGGGTACGCGACCAGCTCGTGAGCAGGGGGGTAAACGGCGGTTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:790603/140‑1 (MQ=255) aTTTGTTTCAAAAACTGGGCACATATTAAAAAATCGTCCAAAACGAATGGAAATGGGTACGCGACCAGCTCGTGAGCTTGCGGTTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:3717129/140‑1 (MQ=255) aTTTGTTTCAAAAACAGGCCAGATATTATAAAATCGTCGACAAAGAATGTAACTCGGTCCGCGCCCCGCTCGTGAGCTGGCGGGTAACCGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:3115226/140‑1 (MQ=255) aTTTGTTTAAAAAACTGGGAAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGATCGTGAGAATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:4747242/140‑1 (MQ=255) aTTTGTTTAAAAAACAGGGCATAGATTTTAAAATCGTCGACAAATAATGGAAATCGGTACGCGACCAGATCGTGAGCATGCGGTTAACCGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:2550174/140‑1 (MQ=255) aTTTGTTCAAAAAACAGGGCAGAGTTTATAAAATCGTCGACAACGAATGCAAATCGGTACGCCACCAGCGCGTGAGAATGCGGGAAACCGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:4611206/140‑1 (MQ=255) tttttAAAAAAACGGGAATATATTATAAATTAGTCGACAAACATTGGAAATCGGTACGCGACAAGCTCTTGATAATGCGGTTAAACGGCGGTTTTCATTATTTGACATTACACGACGGTGATTACATGAAAAATAACGAg < 1:1869135/138‑1 (MQ=255) tGTTTAAAAAACAGGGAAGACATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCTACCAGCTCGTGAGAATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAg < 2:4263796/140‑1 (MQ=255) tGTTACAAAAACAGGTCAGATATTATAAAATCGTCTACAAATAATGTAAATGGGTACGCGACCAGCTGTTTAGCATGCGGTTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAg < 2:3984214/140‑1 (MQ=255) gTTTCAAAAACTGGGCATAGATTATAAAATCGTCGAAAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCAGGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 2:745668/140‑1 (MQ=255) gTTTAAAAAACAGGGCAGATATTATAAAATCGTCGACAAAGATTGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 2:4123453/140‑1 (MQ=255) tttAAAAAACTGGGCAGAGATTATAAAATCGTCGAAAAAGATGGGAAATCGGTACGCGACAAGCTCGTGCGCTGGGGGGTAAAGGGGGGGTTTCCATTTTTGAATGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:5149357/140‑1 (MQ=255) tttAAAAAACTGGGCAGAGATTATAAAATCGTCGAAAAAGAATGCAAATGGGTACGCGACCAGCTCGTCAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:2995570/140‑1 (MQ=255) tttAAAAAACTGGGAATTGATTATAAATGGGTCGAAAAATAATGGAAATCGGTACGCTACCTGTTGTTCAGCATGGGGGTAAACGGCGGGTTTCCTTATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3091204/140‑1 (MQ=255) tttAAAAAACAGGGCAGATATTATAAAATCGTCGAAAAAGAATGCAAATCGGTCCGCGACCAGCTCGTGAGCATGGGGGTAACCGGCGGGTTTCAATATTTGACAGTACACGACGGTGATTACATGAAAAATAACGAGct < 1:388721/140‑1 (MQ=255) tttAAAAAAATGGGCAGAGATTATAAAATCGTCGACAATGAATGGAAATCGTTACGCGACCTGCTCGTTTGCATGCGGTTAAAGGGCGGGTTTCCATTTTTGAAAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:1078124/140‑1 (MQ=255) ttacAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAGGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAACCGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:920635/137‑1 (MQ=255) ttacAAAAACAGGCCAGCTATTATAAAATCGTCGACAAAGAATGCAAATCGGTCCGCCACCAGCTCGTGAGCTTGCGGGTAAACGGCGGGTTTCCATATTGGACATTAACCGACGGTGATTACATGAAAAATAACGAGct < 1:1519295/137‑1 (MQ=255) ttaaaaaaaaTGGCCAGATATTATAAATTGTTCTAAAATGAATGCAAATCGTTTCGCCACAAGCTCGTTCGCATGCGGTTAAACGGCGGGTTTCAATTTTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:456104/136‑1 (MQ=255) aaCAGGGCTGTTTTTTTAAATTCGTCCAAAAATAATGCAATTCGGTAGGCCACCAGCTCGTGAGCATGGGGTTAAAGGGCGGTTTTCAATATTTCACATTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATAtt < 1:4633538/140‑1 (MQ=255) aaCAGGGCATATATTATAAAATCTTCGACAAACAAGGTAAATCGGTACGCAACAAGATCTTGACAATGCGGTAAAAGGGGGGGTTTCCATATTTCACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATAtt < 1:2884873/140‑1 (MQ=255) aaCAGGGCATAGATTATAAAATCGTCGACAAAGACTGTAAATCGGTACGCGACCAGCTCGTGAGAATGGGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATAtt < 1:2822340/140‑1 (MQ=255) ggCATAGATTATAAAATCGTCCACAAAGAATGGAAAGCGGTACGCCACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCa < 1:4240968/140‑1 (MQ=255) ggCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTCCACGACGGTGATTACAGGAAAAATAACGAGCTCTCTATTAAGCa > 2:2896402/1‑140 (MQ=255) ggCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCa > 2:4020597/1‑140 (MQ=255) ggCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCa > 2:5108870/1‑140 (MQ=255) gctccgaTTATAACATCGGCTCAAAAGATGGGAAATCTGTACGCGACCACCGGGTGCGCACGCGGGTAAACGGGGGGTTTCCAAATTTGACTGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCAt < 2:2060046/135‑1 (MQ=255) gaagagATTATAAAATCGTCGACAAAGAATGGAAATGGGTCCGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCAt < 1:4105388/138‑1 (MQ=255) gCATAGATTATAAAATCGTCGACAACGAATGGAAATCGGTACGCCACCAGCTCGTGAGAATGCGGGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCAt < 2:2465601/140‑1 (MQ=255) gCACAGATTATAAAATCGTCGACAAAGAATGTAATTCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGGGGGTTTCAATATTTGAAATTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCAt < 1:3836465/140‑1 (MQ=255) agaTTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCAGTGGt > 2:4370191/1‑140 (MQ=255) | GCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCTATATTAAGCATTGGT > NZ_CP034943/986664‑986939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |