| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,225,192 | C→A | 9.5% | intergenic (‑71/‑48) | EO946_RS06345 ← / → EO946_RS06350 | ATP‑dependent helicase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,225,192 | 0 | C | A | 9.5% | 637.0 / 6.9 | 269 | intergenic (‑71/‑48) | EO946_RS06345/EO946_RS06350 | ATP‑dependent helicase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (114/118); new base A (2/35); total (116/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.29e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 271 total aligned reads displayed.
AATTGGTAATGTTCTCTCGAATATGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAGCAGGATTACGCCGGAACCGAAAA > NZ_CP034943/1225054‑1225331 | ttGGTAATGTTCTCTCGAATATGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCACAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCaaa > 2:1490797/1‑140 (MQ=255) tAATGTTCTCTCGAATTTGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAaagt < 2:673878/140‑1 (MQ=255) tAATGTTCTCTCGAATATGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAaagt < 2:3084518/140‑1 (MQ=255) gTTCTCTCGAATATGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCCAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAaagtaact > 2:3125244/1‑138 (MQ=255) ttCTCTCGAATATGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTAAAAAAGTAAGtt > 2:4486655/1‑140 (MQ=255) ctctcGAATATGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTa < 1:2289600/140‑1 (MQ=255) tctcGAATATGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTaa > 2:2543800/1‑140 (MQ=255) tctcGAATATGGATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTag > 2:1110761/1‑139 (MQ=255) ctcGAATATGTATGTAACTGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAg < 1:1042280/140‑1 (MQ=255) atatGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGaaa < 1:3941468/140‑1 (MQ=255) tgtatgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAgg < 1:4953666/140‑1 (MQ=255) tgtatgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTACAAATAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAgg < 1:5136808/140‑1 (MQ=255) tatgtaAATTTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAATGGaa < 2:3599566/140‑1 (MQ=255) tatgtaAATGTATAGTTCGATGTTTGAGTCGGGCGCATTTAAAAAAGGGATCCGCACAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAATCGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGaa < 1:4866030/140‑1 (MQ=255) tatgtaAATGTATAGTTCGATCATTCAGTGGTGATCATTTCAAAAAGGTATCCTCCCAATACAAAAAGGTTTTCATTACAGACAAAGCCTATCATATCAATAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGaa < 2:3264866/140‑1 (MQ=255) tatgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAATGTGTTCATTACAGACAAAGACTTTCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGaa < 2:4422657/140‑1 (MQ=255) tatgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTACGTTTAAGGGAAAAGGaa < 2:4520492/140‑1 (MQ=255) tatgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGaa < 1:3763989/140‑1 (MQ=255) tatgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGaa < 2:5095498/140‑1 (MQ=255) tatgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGaa < 2:526312/140‑1 (MQ=255) atgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTCAGGTAAAAGGacc > 2:4632365/1‑138 (MQ=255) atgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGacc > 2:2239505/1‑138 (MQ=255) atgtaAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAAc > 2:3419895/1‑140 (MQ=255) aaaTGTATAGTTCTATCATTCAGTCGGGCGCATTTCAAAAAGGTATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAATCCTATCATATCAAAAGAAACGTGTTTCAAAAAGTATGTTTAAGGGAAATGGAAcagca < 2:4665434/140‑1 (MQ=255) aaaTGTATAGTTCTATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTAATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTAAAAAAGTAAGTTTAAGGGAAAAGGAAcagca < 1:62222/140‑1 (MQ=255) aaaGGTATAGTCCGATAATTACGTCGTGCGAATTTCAAAATGGGATCCGCCCAATCAAAAAAGTTGTTAATAACTTACAAAGACTATCATATCAAAAGAAAGTTGTTTAAAACATTAAGTTTAATGgaaaaggaaaagaa < 2:2405002/140‑3 (MQ=255) atttataGTTCTATCATTCAGTCGGGCGAATTTCAAAAAGGGATCCGCCCAATCAAAAAAGGTGTCCATTACAGACAAAGACTATCATATAAAAAGAAACGTGTTTAAAAAAGTAAGTTTAAGGGAAAAGGACCAGCaga < 2:265403/137‑1 (MQ=255) aTGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGaaa > 2:3745699/1‑128 (MQ=255) taGTTCGATCATTCAGTCGGGGGAATTTAAAAACTGGATCCTCCAAATCAAAAAAGGTGTTCATTACACAAAACGCCTATCATATCAAACGAAACGTGTTTCAAAAAGTAAGTTTAAGGTAAAAGGAACAGCAGAGgggt < 2:3509755/140‑1 (MQ=255) taGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGACAAGGAACCGCAGAGgggt > 1:1380726/1‑140 (MQ=255) taGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGgggt > 1:4128890/1‑140 (MQ=255) gTTCGATCATTCAGTCGGGCGCATTTCAAAAATGTATCCTCCCAATCAAAAAAGGTGTTCATTCAAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGgggtgg < 1:147793/140‑1 (MQ=255) gTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGACCAGCAGAGgggtgg > 2:4105959/1‑140 (MQ=255) ctaTCATTCAGTCGGGCGCATTTCAAAAAGGGATCATCCAAATCAAAAAAGGTTTTCATTCCAGACAAAGACTATCATATCAAAAGAAACGTGTTTAAAAAAGTAAGTTTAGGGGAAAAGCAACAGCAGAGGGGTGGGTa < 1:4575400/138‑1 (MQ=255) cGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTa > 1:3269495/1‑140 (MQ=255) cGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTa > 1:3086511/1‑140 (MQ=255) cGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGGTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTa > 1:1535166/1‑140 (MQ=255) cGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCGCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTa < 1:581679/140‑1 (MQ=255) cGATCATTCAGTCGGGCGAATTTAAAAACGGGATCCTCCCAATCAAAAAAGGTGTTCTTTACAGACAAAGACTATCATATCAAAACAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGCAACAGCAGAGGGGGGGGTa < 1:951173/140‑1 (MQ=255) cGATCATTCAGTCGGCCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTCCATTACAGACAAACACTATCATATCAAACGAAAGGTTTTTAAAAAATTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTa < 2:1959040/140‑1 (MQ=255) gATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTCTCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGACCAGCAGAGGGGTGGGTAt > 2:1703747/1‑140 (MQ=255) aTCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATc > 2:1602015/1‑140 (MQ=255) aTCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATc > 1:711675/1‑140 (MQ=255) cATTCCGTCGGGCGCATTTAAAAAAGGGACCCTCCCAATCAAAAAAGGTGTTAATTACAGACAAAGACTAGCATATCAAAAGAAACGTGTTTAAAAACGTACTTTTAAGGCAAAAGGAACAGCAGAGGGGTGGGTATCGt < 1:2140255/140‑1 (MQ=255) cATTCAGTCGGGCTAATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAACGAAACGTGTTTCAAAAAGTACGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGt < 1:4099958/140‑1 (MQ=255) cATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCCTATCAAAAGAAACGTGTTTCAAAAAGTACGTTTAAGGGAAAAGGAACAGCAGCGGGGTGGGTATCGt < 2:4191839/140‑1 (MQ=255) cATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGt < 1:1812257/140‑1 (MQ=255) cATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTAAAGGCAAACGGAACAGCAGAGGGGTGGGTATCGt < 1:4390620/140‑1 (MQ=255) cATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGGGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAACGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGt < 1:4158427/140‑1 (MQ=255) cATTCAGTCGGGCGCATTTAAAAAAGGGATCCTCCCAATCAAAAAAGGTTTTCATTACACACAAACACTATCATATCAAACCAACCGTGTTACAAAAAGTAAGTTTACGGCAACCGGAACAGCAGAGGGGTGGGTATCGt < 1:508883/140‑1 (MQ=255) cATTCAGTCGGGCGAATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCTTTACATACAAAGACTATAATATCAAAAGAACCGTTTTTCAAAACGTACGTTTAAGGGAAAAGCAACAGCAGAGGGGTGGGTATCGt < 1:333663/140‑1 (MQ=255) atttCAGTCGCGCGCATTTCAAAAAGGTATCCTCCAAATCAAAATATGTGTTCATTACTTACAAACAATATCATATCAAAAGAAACGTGTTTAACAACTTAACTTTAAGTGAAAAGTACCTGCTGTGGGGTGGGTATCGt < 2:4298816/138‑1 (MQ=255) aaTTCCGTCGGGCGCATTTCAAAAAGGGAGCCGCCCAATCAAAAAAGGTGTTCATTACAGACAAAGAATAACATATCAAACGAACCGTGTTTCAAAAAGTAAGTTTAAGGCAAACCCACCAGCAGAGGGGTGGGTATCGt < 2:762913/139‑1 (MQ=255) aaTTCAGTCGGGCTCTTTTAAAAATGGGATCCTCCAAAAAAAAAAAGGTGTTCATTACATACAACCACTAAAATATCAAAACAAACGTGTTTAAAAATGTAAGTTTAAGGGAAAAGGAACAGCAGTGGGGGGGGTATCGt < 2:5146814/139‑1 (MQ=255) aaTTCAGCCGGGCGAATTACAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTAATTACAGACAAACACTATCATATAAAAACAAACGTTTTAAAAAAATTACGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGt < 2:836091/139‑1 (MQ=255) ttCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAATGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAATGGAACAGCAGAGGGGTGGGTAGCGTAt > 2:4269363/1‑140 (MQ=255) ttCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTAt > 2:2915940/1‑140 (MQ=255) cAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGa > 2:786503/1‑140 (MQ=255) attCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAACGGTGTACATTACAGAAAAAGACTATCATATCAAAACAAACGTGTTACAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGat < 2:2075307/138‑1 (MQ=255) aGTCGGGCGCATTTCAAAAAGGCATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGat < 2:4610800/140‑1 (MQ=255) cATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAgg > 1:3890363/1‑140 (MQ=255) tttCAAAAAGGGATCCTCCAAATCAAAAAAGGTGTTCATTACATACAAAGAATATCATATAAAAATAAACGGGTTTAAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGTTGGGTATCGTATGATATATGCAGGTc < 2:4965002/140‑1 (MQ=255) tttCAAAAAGGGAGCCGCCCTATCAAAAAAGGTGTTCATTACAGACAAAGACTATCTTATCAAAATAAACGTGTTTCAAAACGTAAGTTTAAGGGAAAAGGAACAGCAGTGGGGTGGGTATCGTATGATATATGCAGGTc < 1:4444388/140‑1 (MQ=255) ttCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGgggt > 1:3325112/1‑114 (MQ=255) aacggtaTCCCCCAAATCAAAAATGGTGTTCATTAAACAAAACCACTATCATATAAAAAGAACCGTTTTAAAAAAAGAAAGTTTAAGGCAAAAGCAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTc < 2:2344037/134‑1 (MQ=255) gATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAAc > 1:1663394/1‑140 (MQ=255) gATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAAc > 1:2966091/1‑140 (MQ=255) gATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAAc > 1:1174756/1‑140 (MQ=255) gATCCTCCCAATCAAAAAAGGTGTTCATTACACAAAAACACTATAATATAAAACGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGCAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAAc < 1:3390802/140‑1 (MQ=255) gATCCTCCAAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCAAATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGTAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAAc < 2:70268/140‑1 (MQ=255) tccCAATCAAAAAAGGTGTTCATTACAGACACTGACTATCATATCCAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGCAATGTAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAGAGTCAGAACCAGCa > 2:2897133/1‑140 (MQ=255) ggTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCACAATATg > 1:3736683/1‑140 (MQ=255) tgtTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCa > 2:2859910/1‑140 (MQ=255) ttatttACATACAAAGACTATCATATCACAATAATCGTGTTTAAAATAGTAATTTTAAGGTACAAGGAACAGGAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCCGAACCAGCAATACGCTCAATAGGCaaa < 2:1531985/136‑1 (MQ=255) ttCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCaaa < 1:2726858/140‑1 (MQ=255) ttCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCaaa > 1:4662263/1‑140 (MQ=255) ttCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCACAATATGCaaa > 1:4522929/1‑140 (MQ=255) ttCATTACAGACAAAGACTATCATATCAAAAGAAACGTGGTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTCTCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATAAGCTCAATATGCaaa > 1:3475687/1‑140 (MQ=255) aTTACATACAAAGACTATCATAACAAACGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAg < 2:4819886/140‑1 (MQ=255) aTTACAGAAAAATACTATCATATCAAAATAAACGTGTTACAAAATGTATTTTTAAGGTAAAAGGAAAAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAg < 2:2273424/140‑1 (MQ=255) aGACAAAGCCTATCATATCAAACCAAACGTGTTTCAAAACGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGGGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGa < 2:4393087/140‑1 (MQ=255) aaaGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTgg > 2:1005551/1‑140 (MQ=255) aGACTATCATATCAAAAGAAACTTGTTTAAAAAAGTCCGTTTAAGGGAAAAGGACCAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATAGGCAAATAGAACTATTGGac < 1:257408/140‑1 (MQ=255) tatcatatcaAAACAAACGTGTTTCAAACAGTAAGTTTAAGGGAAAAGCAACAGCCGAGGCGTGGGTATCTTATGATATATGCAGGTCAACTTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACaa < 1:2995684/140‑1 (MQ=255) atcatatcaAAAGAACCGTGTTTCAAAAAGTACGTTTAAGGGAAAAGCAACAGCAGCGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAg < 1:2048680/140‑1 (MQ=255) atcatatcaAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAg < 2:1013786/140‑1 (MQ=255) atcatatcaAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAg < 1:276988/140‑1 (MQ=255) atcatatcaAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAg < 1:4018187/140‑1 (MQ=255) atcatatcaAAAGAAACGTGTTACAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAg < 1:1605691/140‑1 (MQ=255) ataatatcaAAATAAACGTGTTTCAAAATGTAATTTTAAGTCAAAAGCAACAGCAGAGGGGGGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAg < 2:2175203/137‑1 (MQ=255) ataatataaAAACAACCGTTTTTAAAAAAGAACGTTTAAGGCAAAAGCAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAg < 1:1007535/137‑1 (MQ=255) accatatcaAAACAAACGTGTTTAAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAg < 2:4400198/138‑1 (MQ=255) aacatataaAAACAAACTTGTTCAAAAATGTACGTTTAAGGGAAAAGTAACAGCTTAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAg < 2:3826863/138‑1 (MQ=255) caAAAGAAACGTGTTTCAAAAATTAAGTTTATGGGAAATGTAACCGCAGTGGGGTGGTTATCGTATTATATATCCAGGTCAAATACTGAACAACAAATACGAGCAAAATGCAAAATGAACTATGGGAACCAACCAGGAta > 1:2546583/1‑139 (MQ=255) caAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAGCAGGAtt > 1:4335447/1‑140 (MQ=255) aaaGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAGCAGGATTAc > 2:4146831/1‑140 (MQ=255) aaaGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAGCAGGATTAc > 2:3343594/1‑140 (MQ=255) acaaccGTGTTTAAAAACGTAAGTTTAAGGCAAACGGAACAGCAGCGGGGGGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAGCAGGATTACGc < 1:2088975/135‑1 (MQ=255) aCGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAGCAGGATTACGCCGGa > 1:4217599/1‑140 (MQ=255) ggtacAAAAAGTATGTTTAAGGTAAACGGAACAGCAGCGGGGTGGTTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAGCAGGATTACGCCGGAACCg < 2:2506451/136‑1 (MQ=255) | AATTGGTAATGTTCTCTCGAATATGTATGTAAATGTATAGTTCGATCATTCAGTCGGGCGCATTTCAAAAAGGGATCCTCCCAATCAAAAAAGGTGTTCATTACAGACAAAGACTATCATATCAAAAGAAACGTGTTTCAAAAAGTAAGTTTAAGGGAAAAGGAACAGCAGAGGGGTGGGTATCGTATGATATATGCAGGTCAAATTCAGAACCAGCAATACGCTCAATATGCAAATAGAACGATTGGACACAAGCAGGATTACGCCGGAACCGAAAA > NZ_CP034943/1225054‑1225331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |