| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,512,556 | G→T | 5.2% | intergenic (‑84/‑29) | EO946_RS07905 ← / → typA | YlaF family protein/translational GTPase TypA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,512,556 | 0 | G | T | 5.2% | 721.8 / 7.1 | 251 | intergenic (‑84/‑29) | EO946_RS07905/typA | YlaF family protein/translational GTPase TypA |
| Reads supporting (aligned to +/- strand): ref base G (160/69); new base T (2/20); total (162/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.52e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 252 total aligned reads displayed.
TACTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAAC > NZ_CP034943/1512418‑1512695 | taCTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGt > 2:3173275/1‑140 (MQ=255) tGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACATAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATATTGTGAAAGttgt > 2:2928625/1‑138 (MQ=255) tGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTAt < 1:923333/140‑1 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATTTGAAAGTTATCt > 1:4753448/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 2:2888490/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:2748846/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:2639571/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 2:3098884/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:255067/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:312017/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 2:4412228/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 2:2484260/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:3856291/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 2:4640371/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:1166922/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:627/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTGTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:4904486/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTAATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGATGATGTGTTGTATAATGTGAAAGTTATCt > 1:1209894/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGACAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGACAGTTATCt > 1:3255119/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGACAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt < 2:5043512/140‑1 (MQ=255) aaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTaa > 2:2638321/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGATGATGTGTGGTATAATGTGAAAGTTATCTAAttt > 2:3930284/1‑140 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGACAGTTATCTAATTtta > 1:4967618/1‑140 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAAtt < 2:3639956/137‑1 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAAtt > 1:4591285/1‑137 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAAtt > 1:3639956/1‑137 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTtta > 1:1812566/1‑140 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTtta > 1:4834127/1‑140 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTtta > 1:743936/1‑140 (MQ=255) aataatAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAAGTTTATTAGGAGATGa > 2:1179992/1‑140 (MQ=255) taataGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGaaa > 1:2247264/1‑140 (MQ=255) taataGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGaaa > 1:4926934/1‑140 (MQ=255) gTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATGTTATTAGGAGATGAAAAAGTg > 2:4196110/1‑140 (MQ=255) gCCAATTCATTTTTTTCATCTTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACtt > 2:146137/1‑140 (MQ=255) gCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGAGGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACtt > 1:5154372/1‑140 (MQ=255) gCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTCTAATGTGTAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAAGtt > 1:502627/1‑140 (MQ=255) ttCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAATCGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGaaa > 1:848048/1‑140 (MQ=255) ttCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGaaa > 1:3502423/1‑140 (MQ=255) ttCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGaaa > 1:4498060/1‑140 (MQ=255) cATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATg < 2:2231796/140‑1 (MQ=255) cATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATg < 2:581773/140‑1 (MQ=255) cATTTTTTTCATATTTTCCATCCCCCCTAACCTCTGATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGACGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATg < 1:2064485/140‑1 (MQ=255) aaTTTTTTTCATATTTTCCATCCCATTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATg < 2:587042/139‑1 (MQ=255) tttttttCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGAt < 2:4515835/140‑1 (MQ=255) tttttttCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGAt < 2:4975168/140‑1 (MQ=255) tttttttCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGAt < 1:1148039/140‑1 (MQ=255) ttttttCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGAAGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAAATTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATc > 2:348407/1‑140 (MQ=255) tCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATcgc < 1:3198328/140‑1 (MQ=255) tCCATCCCCTTTTACGTATTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATcgc < 1:4325987/140‑1 (MQ=255) ccTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTACAGAGGATGTGTGGTATAATGTGAAAGTTATCTACTTTTAGTAGGAGAGGAAAAAGTGAAACTTCGAAATGATCTTCGCACCCTCGCGcttatt > 1:214990/1‑140 (MQ=255) cTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTg < 1:1075134/140‑1 (MQ=255) cTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTg > 2:521046/1‑140 (MQ=255) ttttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGc < 1:4459711/140‑1 (MQ=255) tttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGcc < 1:2459233/140‑1 (MQ=255) cGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACg < 1:4412228/140‑1 (MQ=255) ttATCATAATTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGa < 2:536321/140‑1 (MQ=255) ttATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATcgc > 1:3059673/1‑122 (MQ=255) ttATCATAAGTTTAAAGAAAAAAGTGACTCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGTAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGa < 2:2554950/140‑1 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 2:138188/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:2283398/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 2:4437805/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:3697136/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 2:63251/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAAGGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGACCACGTTGAc > 1:2619484/1‑140 (MQ=255) aCAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACg > 2:3473374/1‑140 (MQ=255) aCAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACg > 1:4139797/1‑140 (MQ=255) aaCGTGACGCTTTTAAAGAGGATGTGGGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAg > 1:1452387/1‑140 (MQ=255) aCGCTTTTAACGAGTATGTTTGGTTTATTTTTAAATTTATATATTTTTATTCGGATATCAAAAAGTTAAACTTCGAAATCATCTTCCCAAAAGCGCTTTTTTTGCCCACTTTGACAAGGGGAAAACGACTCTAGTCGATc < 1:3780313/140‑1 (MQ=255) ttAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCttt > 2:854701/1‑140 (MQ=255) ttAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCttt > 2:4604840/1‑140 (MQ=255) ttAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCttt > 2:1849332/1‑140 (MQ=255) ttAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCttt > 2:1576365/1‑140 (MQ=255) ttggttgtttgGTATATTTTTAATTTTTTATATTTTTATTTGTATATTAAAAATTCAAAGTTCGAAATTATATTCGCAACATCGCGTTTATGGCCCACGTTCACCATGGGAAAACGACTCTAGTCGATCAGCTTTTacac < 2:5083444/135‑1 (MQ=255) ttggATGGGTGGTATAATTTCAATGTTATCTAATTTTATTTGGAGAATAAAATGTAAAACTTCTAAATGATCTTCGAACCTTCGCTATTATGGCCCACGTTGACCAGGGGAACACGACTCTAGTCGATCAGCTTTTacac < 1:3415237/138‑1 (MQ=255) tagGTTGTGTGTTTTAATTTTAATTTTATATAATTTTATTTGTATTTTAAAAATTGAAAGTTCGAAATTATCTTCGAAACATCGCTTTTTTGGCCCACTTTGACCATGGCAAAACGACTCTAGTCGATCAGCTTTTacac < 2:4834127/139‑1 (MQ=255) gtgtttgtttgttATATTTTTAAAGTTATCTATTTTTATTAGGTGTTGAAAAATTGAAATTTCGAAAGTATCTTCGCAACTTCGGTTTTATTGCCACCGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTacac < 2:1117446/135‑1 (MQ=255) gagGTTGTGTGTTTTAATGTTAAAGTTATATATTTTTTTTAGGTGATCAAAAATTCAAAGTTCTAATTGAGCTGCCCACCACCGCGTTTTTGGCCCAGGTTGACCTTGGCAACACGACTCTAGTCGATCAGCTTTTacac < 1:4159354/140‑1 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:5121981/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 2:2420798/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 2:3663078/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:1742081/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGATTTTACACCAg > 2:2731490/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCACCTTTTACTCCAg > 2:4324544/1‑140 (MQ=255) ttgtttgttATAATTTTAAAGTTAAATAATTTTATTAGGATATGAAAAAGTTAAACTTCCAAATTATCTTCGCAACTGCGCGTTTATGGCCCCCGTTCACCAGGGTAACACGACTCTAGTCGATCAGCTTTTACACCAgg < 1:3479487/139‑1 (MQ=255) ttgtgtgTTATATTGTTAAATTTATATATTTTTATTTGGATATTAAAAATTCAAACTTCCAAATCATCTCCACAACCGCGCGTTTATGGCCCCGGTTCACCATGGCAACACGACTCTAGTCGATCAGCTTTTACACCAgg < 1:2781015/139‑1 (MQ=255) ttgtgtgTTATACTGTGAATGTTTAATACTTTTATTAGGAGATGAAAAAGTCAAAGTTCGAAATGATCTTCGAAACATCGCGATTATTCCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:1252592/139‑1 (MQ=255) tgttataTTGTGAAAGTTATCTATTTTTATTAGGATATCAAAAAGTTAAATTTCTAAATTATCTTCGCAACATCGCGTTTTTGGCCCAGGTTGACCTTGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGt < 2:3856291/137‑1 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCg > 1:1972469/1‑140 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCg > 1:811583/1‑140 (MQ=255) tgtgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATAAGCTTTTACACCAGGCTGGTACGTTcct > 1:1267986/1‑139 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACTACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTg > 1:5044414/1‑140 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTg > 1:1524990/1‑140 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTg > 1:2178013/1‑140 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTg > 1:1374460/1‑140 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTg > 1:5217033/1‑140 (MQ=255) tgAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACATTCCGTg > 2:738121/1‑140 (MQ=255) taaaTTTATATATTTTAATTCGTAGATAAAAACGTAAAACTTCCAAATCATCTTCGCAACCCCGCGATTAGTGCCCAGGTGGACCATGGGAACACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGc < 2:2676278/139‑1 (MQ=255) taaaTTTAACTATTTTTATTAGTATATGAAAAAGTGAAACTTCTAATTTATCTTCGCAACATCGCGTTTCTTGCCCCGTTTGACCAGGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGc < 2:3396007/139‑1 (MQ=255) gAAATTTATATATTTTTATTAGTATATGAAAAAGTTAAACTTCGAAATTATCTCCGCAACAGCGCGATTATTGCCCACGTTGACCATGGGAACACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGc < 2:4294706/140‑1 (MQ=255) gTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAAc > 2:2314817/1‑140 (MQ=255) | TACTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGTACGTTCCGTGCCAAC > NZ_CP034943/1512418‑1512695 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |