| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,800,874 | A→C | 15.0% | S3519R (AGC→CGC) | EO946_RS09135 → | SDR family NAD(P)‑dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,800,874 | 0 | A | C | 15.0% | 544.4 / 34.4 | 270 | S3519R (AGC→CGC) | EO946_RS09135 | SDR family NAD(P)‑dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (138/82); new base C (2/48); total (140/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.17e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 274 total aligned reads displayed.
ATTGATCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAACGCCG > NZ_CP034943/1800738‑1801013 | aTCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCg > 2:4962439/1‑140 (MQ=255) tggttttctttttAACGGAACACAAAGAGATTATCTAAGCATTTTCCCGGGTTTATGGGTGTGAGTCACAAAAGCCCCCTGAAGCTGTTTTGGAATTTCCTGCATCTATCTTACCACAAAAAAATAATATAAGCGACCgg < 1:870204/135‑1 (MQ=255) tgggCTTCTTCTTAACGGATAACAAATAGCTTATCGAAGAATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCgg < 2:5067115/138‑1 (MQ=255) tCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCgg < 2:3896137/140‑1 (MQ=255) tCGGCTTCTTATTAACGGATCACAATGAGCTGATCGAAGAATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGATCTCGTACCATAAAACAATAATATAAGCGACCgg < 2:3166610/140‑1 (MQ=255) cttcttctgAACGGATCACAACGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGACATTCCTGCAGCTCTCGTCCGAGACAACAATAATATAAGCGACCGGCAAt > 1:4273933/1‑140 (MQ=255) cttcttAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAAtctc > 1:3583276/1‑140 (MQ=255) aCGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGa > 2:72376/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 1:801189/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:925096/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:4331409/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:3942710/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:2657932/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:1493926/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 1:4736962/1‑140 (MQ=255) aaaGCGCTTCTCGAAGCTTTTTACCGGGTTGATGCGTCTGAGCCAAAAAAGCCCCCTTACGGTTATTTGCAAATGCCGGCAGCTCTCGTACAACAAAACAAAAATAAACGCGACCGGCAATCTCACGCCGAGCCTATCGc < 1:2271491/140‑1 (MQ=255) cgCTGATCGAAGCTTTTTACGGGTATGAGGCTTCTGAGGCAAACAACCCCCCTGAAGCTTTTTTCTAACTTCCTGCAGCTCTCGAACCAGAAAACATTAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCatt < 1:318067/139‑1 (MQ=255) tcTGATCTAACCATTTTCCCGGGTTGATGCTTCTCCGCCAAAAAACCCCCCTCAAGGTGATATGAAAATTCCTGCAGCTCTCTTACCAAAAAAAAATAATACAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCatta < 1:693902/139‑1 (MQ=255) gCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGGTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCatta > 1:3116424/1‑140 (MQ=255) gCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCGatta > 2:3105264/1‑140 (MQ=255) gCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCatta > 1:3590806/1‑140 (MQ=255) gCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCatta > 1:1211744/1‑140 (MQ=255) gCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCatta > 2:2542995/1‑140 (MQ=255) cTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCattat > 2:3592412/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTgg > 2:2017794/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTgg > 2:208606/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTgg > 2:1039923/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTgg > 2:3749792/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCAGTATTgg > 1:4142346/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACAAGAAAACAATAATATAAGCGACCGGCAATATCACGCCGAGCCTATCGCCATTATTgg > 2:5203396/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGAGATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGTGCCTAGCGCCAGTCTTgg > 2:3356882/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGACGCACAAAAGCCCCCTCAACCTGATATGGACATTCCAGCAGCTCTCCTACCAGAAAACAATAATATAAGCGACCCGCACTCTCACGCCGAGCCTATCGCCATTAGTgg > 2:4452806/1‑140 (MQ=255) tCGACGAATTTTACCGGTATGATGCTTATGCGGAAAAAAAGCCCCCTGAAGCTGATATGTAAATTCCTGCAGCTCTCGTACCACAAAAAAATAATAAAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGc < 1:2337035/140‑1 (MQ=255) tCGAAGCATTTTACCGGGATGATGCGTCTGAGGCAAATATCCCCCCTGAAGCTGATAAGGTAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGc < 2:3015760/140‑1 (MQ=255) ctaaGAATTTTCCCGGTATGATGCGTCTGCGCCACAAAACCCCCCTCACGGTGATATGCAAATTCCGGCAGCTCTCGTACAACAAAACAATAATAACCGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCa < 1:4348741/138‑1 (MQ=255) aaGCATTTTACCGGGATGATGCGTCTGAGGAACACAAGCCCCCTGACGCTGACATGGAAATTCCTGCAGCTCGCGTACCAGAACCCAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATg < 2:2216941/140‑1 (MQ=255) aGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGa > 1:1506930/1‑140 (MQ=255) aGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGa > 1:1484578/1‑140 (MQ=255) aGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCCCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGa > 1:4867028/1‑140 (MQ=255) aCCGGTATGATGCGTGTGCGGCACACACGCCCCCTGACGCTGATATGCAATTTCCGGCACCTCTCGTACCCCAAAACAATAATATCAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAgg < 1:1094147/140‑1 (MQ=255) ccGGGATGAGGCTTCTGAGCCACAAACGCCCCCTGACGCTTATTTGGAAAGTCCGGCAGCGCGCGTACCAGAAAACAAAAATAAACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGt < 1:2083825/140‑1 (MQ=255) ggATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCGATTCTTGGCATGAGTGGCAGGTTTc > 1:2634585/1‑140 (MQ=255) ggATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTc > 1:5074542/1‑140 (MQ=255) ggATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTc > 1:270806/1‑140 (MQ=255) ttgttgCGTCTGAGCCAAAAACGCCCCCTCAAGCTTATATGTAAATTCCTGCCGCTCTCTTACCACAAAACAATAATACACGCGACCGGCAATCTCCCGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCt < 1:471118/136‑1 (MQ=255) ttgatgCGTCTGAGGCAAAAAAGCCCCCTCAAGCTTATATGCAATTTCCGGCAGCTCTCGTACCACAAAACAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCt < 1:3353463/139‑1 (MQ=255) atgatgCTTCTGAGCAAAAAAACCCCCCTCAAGCTGATATGCAAATTCCTCCAGCTCTCGAACCATAAAAAAATAATAAACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCt < 1:430004/140‑1 (MQ=255) atgatgCGTGTGAGGCAAAAAAGCCCCCTTAAGCTTATTTGTAAATTCCTGCAGCTCTCTTACCACAAAACAATAATAAACGCGACCGGCAATCTCACGCCGAGCCTATCTCCATTATTGGCATGAGTGGCAGGTTTCCt < 1:435870/140‑1 (MQ=255) atgatgCGTCTGATGCAAAAAAGCCCCCTTAAGCTTATATGGAAATTCCTGCAGCTCTCTTACCCCAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCt < 2:4142346/140‑1 (MQ=255) atgatgCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCt < 2:4340412/140‑1 (MQ=255) atgatgCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGAACCACAAAACAATAATAAACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCt < 1:3398676/140‑1 (MQ=255) tccGTCTCAGCCACAAAACCCCCCTCACGCTGATATGGAAATTCCGGCAGCTCTCGTCCCACAACACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAg < 1:2766210/138‑1 (MQ=255) ggCGTGTGAGGCACAAAACCCCCCGCACGGTTATTTGGAAATTCCTGCAGCTCTCGTACCACAAAAAAATACCAACAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAg < 1:500867/139‑1 (MQ=255) cGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCt > 1:3465190/1‑140 (MQ=255) tCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGa > 1:1445047/1‑140 (MQ=255) tgcggCAAAAAACCCCCGTGACGGTGTTTTGGAATTTCGTGCAGCTCTCGTACCATAAAACAATATTAAACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAtt < 1:1263218/137‑1 (MQ=255) tGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAtt < 2:1493952/140‑1 (MQ=255) tGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAtt < 2:1580117/140‑1 (MQ=255) tGAGCCACAAACGCCCCCTGACGCTTATATGGAAATTCCTGCAGCTCTGGTACCAGAAAAAAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAtt < 2:148575/140‑1 (MQ=255) gAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATACGCGACCGGCAATCTCCCGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTc < 1:5209238/140‑1 (MQ=255) gAGGCACAAAAGCCCCCTGAAGCTGATATGCAAATTCCTGCAGCTCTCGTACCACAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTc < 1:275091/140‑1 (MQ=255) gAGCCACAAAAGCCCCCTGAAGCTGATATGCAATTTCCTGCAGCTCTCGTCCCAGAAAACAATAATCTCAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTc < 1:1160103/140‑1 (MQ=255) aGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCg > 1:4070149/1‑140 (MQ=255) aGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCg > 1:5166351/1‑140 (MQ=255) aGGCACAAAAGCCCCCTGAAGCTGATATGCAAATTCCTGCAGATATCGTCCCAGAAAAAATGAAAATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCg < 2:1216797/140‑1 (MQ=255) ggCACAAAAGCCCCCTGAAGCTTATATGGAAATTCCTGCAGCTCTCGTACCAGAACACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCgg < 2:2770261/140‑1 (MQ=255) ggCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCgg > 1:166088/1‑140 (MQ=255) caAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCCGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCa < 2:4894162/140‑1 (MQ=255) caAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAACACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCAGTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCa > 2:49300/1‑140 (MQ=255) caAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCa > 2:888526/1‑140 (MQ=255) caAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCa > 1:4653010/1‑140 (MQ=255) aaaaGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCAt > 2:3983484/1‑140 (MQ=255) aaaaGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCAt > 2:3623141/1‑140 (MQ=255) gCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCAGGAGc > 2:4752405/1‑140 (MQ=255) cccccTTAAGCTGATATGGAATTGCCTGCCGCTCTCGTACCACAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCt < 1:1248775/140‑1 (MQ=255) cccTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCa > 1:2388524/1‑98 (MQ=255) cccTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCa < 2:2388524/98‑1 (MQ=255) cccTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTAt > 1:3895221/1‑140 (MQ=255) gATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCt > 2:4711188/1‑140 (MQ=255) atatGGAAATTGCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCACTCTCACGCCGAGCCTATCGCCATGATTGGCATGAGTGGCAGGTGTCCTCAAGCTGATTCGGTGCATGAGCTATGGGAGAATCTg > 1:3014146/1‑140 (MQ=255) atatGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGTCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTg > 1:185250/1‑140 (MQ=255) atatGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTg > 2:797096/1‑140 (MQ=255) atatGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTg > 2:27460/1‑140 (MQ=255) atatGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTg > 2:110603/1‑140 (MQ=255) atatGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTg > 1:1329133/1‑140 (MQ=255) ggAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGTAATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGaaaa > 2:3538643/1‑140 (MQ=255) aaTTCCTGCAGCTCTCGTACCATAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACg < 2:3292557/140‑1 (MQ=255) aTTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACgg < 2:1445047/140‑1 (MQ=255) tCCTGCAGCTCTCTTACCAGAAAACAATACTATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCa < 2:643414/140‑1 (MQ=255) aGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACAtt < 1:1493926/140‑1 (MQ=255) gTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTAtctc > 2:1839374/1‑140 (MQ=255) caaGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGa < 1:2945191/138‑1 (MQ=255) cacaaaaCAATACCATCCGCGACCGGCACTCTCACCCCGAGCCTATCGCCAGTATTGGCATGAGTGGCAGGGTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGAc < 1:3975309/137‑1 (MQ=255) aGAAAAAAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATg < 1:611460/95‑1 (MQ=255) aaaCAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATcc > 2:4519367/1‑140 (MQ=255) taAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAAcgc < 2:3465190/140‑1 (MQ=255) taAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAAcgc < 1:2542939/140‑1 (MQ=255) taAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAAcgc < 1:1039923/140‑1 (MQ=255) taAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAAcgc < 1:3265909/140‑1 (MQ=255) aGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAAcgccg > 2:305838/1‑140 (MQ=255) | ATTGATCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAACGCCG > NZ_CP034943/1800738‑1801013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |