| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,179,645 | G→T | 5.8% | A215S (GCC→TCC) | EO946_RS11020 → | queuosine precursor transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,179,645 | 0 | G | T | 5.8% | 698.6 / 10.1 | 264 | A215S (GCC→TCC) | EO946_RS11020 | queuosine precursor transporter |
| Reads supporting (aligned to +/- strand): ref base G (119/123); new base T (19/3); total (138/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 264 total aligned reads displayed.
GCAGTCAGCCAGCTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACATGAAGGAAAAGCAGA > NZ_CP034943/2179507‑2179783 | gcagTCAGCCAGCTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGc > 2:2088063/1‑140 (MQ=255) gTCAGCCAGCTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGGTTGATATTTTTATTTCTACAAATTTGATTAAGTTTGCGGTATCTTTTATTTCATTGCCTTATGCCTa > 1:3180275/1‑140 (MQ=255) gTCAGCCAGCTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGGTTCATATTTTTATTTGTAAATATTTGATTAATTTTGCGGTATCTTTGATTTAATTGCCTTATGCCTa > 1:2232666/1‑140 (MQ=255) gTCAGCCAGCTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTAGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTTATTAAGTTTGCGGTATCTTTGATTTCATTTCCTTATGCCTa > 1:4979768/1‑140 (MQ=255) tCAGCCAGCTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAATTTTGCGGTATCTTTGATTTAATTTCCTTATGACTAt > 2:3830561/1‑140 (MQ=255) tCAGCCAGCTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTAAATATTTGATTAAGTTTGCGGTATCTTTTATTTCATTGCCTTATGCCTAt > 1:2663833/1‑140 (MQ=255) tCAGCCAGCTGTTTGATACATTTAGATTTACTGGTGTCGCTTTTTTCGGCCTTTATCCTGCAGGCGGTTGGCGTCATAATTTTATTTCTACATATTTGAGTAATTTTGCGGTATCTTTGATTTCATTGCGTTATGCCTAt > 1:5225969/1‑140 (MQ=255) agccagcTGTTTGATACATTTCTATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGAGGTATCTTTGATTTAATTGCCTTATGCCTATgc > 2:2702264/1‑140 (MQ=255) agccagcTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTGGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTTTTTGTAAATATTTTATTAAGTTTTCGGTATCTTTTTTTTCATTGCCTTATTGCTAttc > 1:2689458/1‑138 (MQ=255) agccagcTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATgc > 2:3611356/1‑140 (MQ=255) agccagcTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATgc > 2:2535018/1‑140 (MQ=255) agccagcTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATgc > 2:2502103/1‑140 (MQ=255) agccagcTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTGCATATTTTTATTTCTAAATATTTGATTAATTTTGCGGTATCGTTGATTTCATTGCCTTATGCCTATgc > 1:1985288/1‑140 (MQ=255) agccagcTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCGTCAGATTTTTATTTCTACATATTTGATTAAGTTTGGGGTATCTGTGATTTAATGGCCTTATGCCTATgc > 2:3396982/1‑140 (MQ=255) agccagcTGTTTGATACAGTTATATTAACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGTCGTTAGGCTTCATATTTTTATTTCTACATATTTGATTAACTTTGCGGTAGATTTGATTTCATTGACTAATTCCTAttc > 2:5234184/1‑138 (MQ=255) cagcTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATgcagc < 2:2542877/140‑1 (MQ=255) cTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCaaa > 2:3069487/1‑140 (MQ=255) tGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGAGTAAGTTTGCGGTATCTTTGATTTAATTGCCTTATGCCTATGCAGCaaaaaaaa > 1:2482521/1‑140 (MQ=255) gATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAATTTTGCGGTATCTTTGATTTAATTGCCTTATGCCTATGCAGCAAAAAAAAt > 1:2537157/1‑140 (MQ=255) cATTTATATTTACTGGTGTCGCTTTTTTCTGCATTTAACCTGCAGGCGTTTGGCTTCAAATTTTTATTTATACATAATTGATTAACTTAGCGGTAACTTTGATATCATTGCCTTATGCGTATGCAGCaaaaaataatata > 2:5129426/1‑133 (MQ=255) cATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATa > 2:3437608/1‑140 (MQ=255) cATTTATATTTACTGGTGTCGCTTTTTTAGGCATTTATCCTGCACGCGTTTGGCTTCATATTTTTATTTCTACATATTTTATTAATGTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATa > 2:152057/1‑140 (MQ=255) ttATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATTATACCg > 2:4725217/1‑140 (MQ=255) ttATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCg > 2:225703/1‑140 (MQ=255) ttATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTAATTTCCTTATGCCTATGCAGCAAAAAAAATGATAACg > 2:4433672/1‑140 (MQ=255) tataTTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGa < 2:2961046/140‑1 (MQ=255) tataTTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGa < 2:4742035/140‑1 (MQ=255) tataTTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTAATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGa < 2:3895320/140‑1 (MQ=255) tACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATTCCTATGCAGCAAAAAAAAATATACCGAatgatg > 1:5188096/1‑140 (MQ=255) aCTGGTGTCGCTTTTTTCGGCATTTATCCTTCAGGCGGTTGGCTTGATATTTTTATTTCGACATATTTTAGTAAGTTTGCGGTATCGTTGATTTGATTTCCTTATTCGAATGCAGCAAAAAAAAAGATACCCaaataata > 1:4775018/1‑134 (MQ=255) aCTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGGGTCATATTTTTATTTCTACATATTTTATTAAGTTTTCGGTATATTTTATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATTATAACGAAttatga > 1:829723/1‑140 (MQ=255) aCTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAAtgatga > 2:1545115/1‑140 (MQ=255) aCTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTAAATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTTCCTTATGCCTATGCAGCAAAAAAAATGATACCGAAtgatga > 2:1392413/1‑140 (MQ=255) aCTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCGTCATATTTTTATTTCTACATAATTGATTAATTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAAATATACCGAAtgatga > 1:541564/1‑140 (MQ=255) aCTGGTGTCGCTTTTTTCGGCATTTATACTGCAGGCGTTTGGCTTGATATTTTTATTTATACATATTTTATTAAGTTTTCGGTATATTTTATTTAATTTCCTTATTCCTATTGAGCAAAAAAAAATATAACGAattatta > 1:4620492/1‑138 (MQ=255) tGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGaaa < 1:1543033/140‑1 (MQ=255) tGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGaaa < 1:4404524/140‑1 (MQ=255) gtgtCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTATACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAgg > 2:4345371/1‑140 (MQ=255) tgtCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGa > 2:1043833/1‑140 (MQ=255) tgtCGCTTTTTTCGGCATTTAGCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTTCGGTATCTTTGATTTCATTGCCTTATGCCTAGGCATCAAAAAAAATGATACCGAATGATGAAAGGa > 2:2168485/1‑140 (MQ=255) tCGGCATTTATCCTTCAGGCGTTTGTCTTAATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATATTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGc < 1:4289234/140‑1 (MQ=255) gCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTa < 1:1811036/140‑1 (MQ=255) aTTTATCATGCAGTCGTTTGTCTTCATATTTTTATTTCTACATATTTTATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACa < 1:3911548/140‑1 (MQ=255) tttATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAg < 1:3968411/140‑1 (MQ=255) ttATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGa < 2:749442/140‑1 (MQ=255) ttATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGa < 1:2365/140‑1 (MQ=255) ttCCTGCAGGAGTTTGTCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGTTTTCATTGCCTTATGCCTATGCAGCAAAAAAAATTATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 1:3498415/139‑1 (MQ=255) ctCCTGCAGGCGCTTGGATTCACATATTGATTTCTACATATTTGATTAAGTTGGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 2:743975/139‑1 (MQ=255) aTCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 2:2676742/140‑1 (MQ=255) aTCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 2:200985/140‑1 (MQ=255) aTCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 2:573582/140‑1 (MQ=255) aTCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 2:470649/140‑1 (MQ=255) aTCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 1:990201/140‑1 (MQ=255) aTCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 1:4665037/140‑1 (MQ=255) aTCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATAGTTGATTAAGTTTGCGGTATCTTTGAGTTCAGTGCCTAATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 2:1698115/140‑1 (MQ=255) tGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTCTGCAGCAAACAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAataga > 2:2704778/1‑138 (MQ=255) gCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACATAAatatat > 2:4835450/1‑140 (MQ=255) gCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAatatct > 2:4939895/1‑138 (MQ=255) gCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAatatat > 2:1939908/1‑140 (MQ=255) gCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAatatat > 2:273733/1‑140 (MQ=255) gCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAg < 2:1752014/140‑1 (MQ=255) gCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAg < 2:2224434/140‑1 (MQ=255) gTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGGAAGGAGTTAATAATGCCTACAGACATATAGGTAGAc > 2:4572669/1‑140 (MQ=255) gTTGGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGAc < 1:4229311/140‑1 (MQ=255) tGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGgc > 2:861221/1‑140 (MQ=255) cATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAgc < 1:3830561/140‑1 (MQ=255) cATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAgc < 1:3443029/140‑1 (MQ=255) cATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAgc > 1:2733994/1‑140 (MQ=255) atatTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAgcg > 1:2046867/1‑140 (MQ=255) tttttATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGC‑AAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCgg < 1:662355/140‑1 (MQ=255) ttttATTTCTACATATTTGATTAATTTTGCGGTATATTTGATTTCATTGCCTTATGAATATGCAGCAAAAAAAATTATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCgg < 2:3361751/140‑1 (MQ=255) ttttATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCgg < 1:2088063/140‑1 (MQ=255) ttttATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCgg < 2:2482521/140‑1 (MQ=255) ttttATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCgg < 2:1961566/140‑1 (MQ=255) ttttATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCgg < 2:3192460/140‑1 (MQ=255) ttttATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCgg < 2:5166094/140‑1 (MQ=255) ttATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCATATGCAGCAAAAAAAATGATAACTAATGATGAAAGGAGTTCATAATGACTACAGAAATATATGTAGACGGCGCAAGCGCAGGTa > 2:2886787/1‑140 (MQ=255) tttCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATc < 1:1043833/140‑1 (MQ=255) ttCTACTTATTTGATTAAGGTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAATATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATcc < 1:1282162/140‑1 (MQ=255) ttCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATcc < 2:4520118/140‑1 (MQ=255) tACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCgg > 1:3796923/1‑140 (MQ=255) aCATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGa < 2:325187/140‑1 (MQ=255) aCATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGa < 1:2502103/140‑1 (MQ=255) tttGATTAATTTTGCGTTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATc < 1:5146245/140‑1 (MQ=255) gCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCAtt < 1:3069487/140‑1 (MQ=255) tCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATc < 2:1652382/140‑1 (MQ=255) tCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATc > 1:4452181/1‑140 (MQ=255) tCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATc > 1:3532863/1‑140 (MQ=255) tCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATc > 1:156945/1‑140 (MQ=255) gATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACa > 2:1472170/1‑140 (MQ=255) cATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa > 1:3189319/1‑71 (MQ=255) cATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGaaa < 2:3189247/71‑1 (MQ=255) cATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACATGAAg > 2:1774056/1‑140 (MQ=255) cATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACATGAAg > 1:2418941/1‑140 (MQ=255) tATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACATGAAGGAAAAGCa < 2:3496216/140‑1 (MQ=255) tATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACATGAAGGAAAAGCa > 2:401353/1‑140 (MQ=255) tATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACATGAAGGAAAAGCa < 1:3699524/140‑1 (MQ=255) tATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACATGAAGGAAAAGCa < 1:2323924/140‑1 (MQ=255) tATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAACCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACATGAAGGAAAAGCa < 2:115795/140‑1 (MQ=255) tGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACATAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCAGGGATCGGCATTTTTATCAAACATGAAGGAAAAGCAGa > 2:422506/1‑140 (MQ=255) | GCAGTCAGCCAGCTGTTTGATACATTTATATTTACTGGTGTCGCTTTTTTCGGCATTTATCCTGCAGGCGTTTGGCTTCATATTTTTATTTCTACATATTTGATTAAGTTTGCGGTATCTTTGATTTCATTGCCTTATGCCTATGCAGCAAAAAAAATGATACCGAATGATGAAAGGAGTTCATAATGCCTACAGAAATATATGTAGACGGCGCAAGCGCCGGTAATCCCGGACTATCCGGGATCGGCATTTTTATCAAACATGAAGGAAAAGCAGA > NZ_CP034943/2179507‑2179783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |