| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,269,970 | G→T | 6.1% | S70Y (TCT→TAT) | prsW ← | glutamic‑type intramembrane protease PrsW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,269,970 | 0 | G | T | 6.1% | 933.4 / 3.6 | 370 | S70Y (TCT→TAT) | prsW | glutamic‑type intramembrane protease PrsW |
| Reads supporting (aligned to +/- strand): ref base G (191/120); new base T (3/38); total (194/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.28e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 373 total aligned reads displayed.
AATATTTTCGAGGGTTGCAAAACCGAGCGATACACTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTA > NZ_CP034943/2269831‑2270101 | tCGAGGGTTGCAAAACCGAGCGATACACTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATaaaaa < 1:2396461/140‑1 (MQ=255) aGGGTTGCAAAACCGAGCGATACACTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGa > 2:813786/1‑140 (MQ=255) cacTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTccc > 1:3406448/1‑140 (MQ=255) cacTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTccc > 1:1936327/1‑140 (MQ=255) cacTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACAATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTccc > 1:3114173/1‑140 (MQ=255) ttGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCcaca > 2:3278618/1‑140 (MQ=255) ttGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCcaca > 2:1966555/1‑140 (MQ=255) ttGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCcaca > 2:2242255/1‑140 (MQ=255) gCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACAtt > 2:284072/1‑140 (MQ=255) gCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACAtt > 1:3703135/1‑140 (MQ=255) ccGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATtctc > 2:4118915/1‑140 (MQ=255) ccGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATtctc > 2:1770141/1‑140 (MQ=255) ccGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATtctc > 2:2487732/1‑140 (MQ=255) tataCAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAAAACTGACCATCAGAATAAACCATTTAAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACAGTCTCttt > 2:1455454/1‑140 (MQ=255) aaTCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCaa > 2:730158/1‑140 (MQ=255) aTCCCCTCATAATGCTCAGCAAAGTGGGCGGGCGGGTAAAGACTGACCATCAGAATAAACCATTGTAATGATTCCTCCAACAACCCTGACCAGAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAg < 2:501654/140‑1 (MQ=255) cGTCCTAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGTAGAGAAACAAGAAACGAAAAAGCTTCCGCCTCCCACAGTCTCTTTTTCAAGCACg > 1:2497940/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCCTCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:2308325/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATACACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:3701908/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATtc > 1:2069328/1‑125 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATtc < 2:2069328/125‑1 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:4423122/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 1:3081913/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:1831235/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 1:1792576/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 1:1880355/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACAGTCTCTTTTTCAAGCACg > 1:2696951/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGATTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:4702474/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAAGAAACCATTTTAATGATTCCTCCAAAAACACTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCCAGCACg > 2:861015/1‑140 (MQ=255) taaTAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACAATCAGAATAAACCATTTTAATCATACCTCCAAAAACCCTCAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTa < 1:73180/138‑1 (MQ=255) tCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTa > 1:1126951/1‑140 (MQ=255) cATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 1:4722431/140‑1 (MQ=255) cATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 1:2973460/140‑1 (MQ=255) cATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 1:5087395/140‑1 (MQ=255) cATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 2:4850055/140‑1 (MQ=255) cATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 2:3583187/140‑1 (MQ=255) cATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACAATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 2:4450401/140‑1 (MQ=255) cATAATGCTAATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 2:3127225/140‑1 (MQ=255) tcatcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATaaa < 2:1112460/140‑1 (MQ=255) catcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAATAGTAACGAAAAAGCTTCCGCCTCCCACCTTCTCTTTTTCAAGCACGTACTGGATAAAc > 1:4110489/1‑140 (MQ=255) catcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAAc > 1:2352050/1‑140 (MQ=255) catcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAAc > 1:961206/1‑140 (MQ=255) catcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTATCTTTTTCAAGCACGTACTGGATAAAc > 2:2368846/1‑140 (MQ=255) atcaAAGTGGGCGTGCGGGTAAACACTGACCATCCGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGATTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACa > 2:240174/1‑140 (MQ=255) atcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGc > 1:1235681/1‑124 (MQ=255) atcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGCTaaaaa > 2:4067094/1‑138 (MQ=255) atcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACAGTCTCTTTTTCAAGCACGACCTGGATAAACa > 1:243088/1‑140 (MQ=255) atcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGAGTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGc < 2:1235681/124‑1 (MQ=255) aGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATtgtg < 2:3216380/140‑1 (MQ=255) aGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATtgtg < 2:3059247/140‑1 (MQ=255) tGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTgg‑g < 2:191443/140‑1 (MQ=255) gggCGTGCGTGTAAAAACTGACAATCAGAATAAACAATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCGTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑Ga < 1:1409747/140‑1 (MQ=255) gggCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGACAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑Ga < 2:4565336/140‑1 (MQ=255) gggCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑Ga < 2:4754926/140‑1 (MQ=255) gCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCa > 1:3218036/1‑111 (MQ=255) gCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCa < 2:645553/111‑1 (MQ=255) gCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑Gaaa > 2:1408226/1‑140 (MQ=255) gCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAACTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc > 1:5221600/1‑120 (MQ=255) cGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACaa > 1:4451033/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAATGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTGATGCACGTCCTGGATAAACATTGTGG‑GAAATACAAATACAACACCTAg > 2:3184218/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTCCTGGATAAACATTGTGT‑GAAATACAAGAACAACCCCtcg > 1:2778700/1‑138 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GCAATACAAGAACAACGCCTAg > 1:3509574/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGaac > 2:3510869/1‑131 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGaac > 2:170367/1‑131 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAg > 1:946922/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAg > 2:2720187/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCACCTCCCACATTCTCTTTTTCAAGCACGTa < 2:3529217/101‑1 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGaaaaa > 1:2199303/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGaaaaa > 2:4028103/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGaaaaa > 2:106266/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGaaaaa > 2:955459/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGaaaaa > 2:214891/1‑140 (MQ=255) gattAAATCATTTTAATTATTAGTCCAAAAACCGTGAACTTAATAATCAACCTAAAAAGCTTCCGCCTCCCAATTTGTCTTTTTCAACCAGGTACTGTATATACTTTGTGT‑GAATTACCATAAAACCCCCTAGAAAAAAc < 2:2232294/137‑1 (MQ=255) tAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTCCTGGATAAACATTGTGG‑GAAATACAAGAACCACCCCTAGAAAAAACGAc > 1:1555632/1‑140 (MQ=255) aaTTTTATTTATTCCTCCAAAAACCCTCAATATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTATTTTTAAAGCACGTACTGTATAAACATTGTGG‑TAAATACAAGAACAACCCCTATAAAAAACGACCGAAg < 2:1621132/139‑1 (MQ=255) aTTTTATTGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACTTTCTCTTTTTCAAGCACGTAGTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:3380510/140‑1 (MQ=255) aTTTTATTGATTCCTCCAAAAACCCTGAACATAAAAAACAAACTAAAAAGCGTCCGCCTCCAACATTCTCTTTTTAAAGCACGTACTGTATAAACATTGTGG‑TAAAAACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:3325994/140‑1 (MQ=255) aTTTTAATTATACCACCAAAAACCCTCAATAAAAAAAAAAAACCAAAAAGCTTCCCCCCCCAAATTTCTTTTTTTCAAGCACGTACTGGATAAACATTGTGG‑TAAATACAACAACAACCCCTCCAAAAAACGACCGAAGc < 1:2938092/140‑1 (MQ=255) aTTTTAATGTTTCCTCCAAAAACCCTGAAGATAAAAAAAAAACTAAAAAGCTTCCGCCTCCCACATTATATTTTACAAGCACGTACTGCATAAACATTGTGG‑TAAATACAACAACAACCCCTAAAAAAAACGACCGAAGc < 1:2638131/140‑1 (MQ=255) aTTTTAATGATTCCTACAAAACCCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACTTTGTGG‑TAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:1302310/140‑1 (MQ=255) aTTTTAATGATTCATCAAAAATCCCTGAATATAAAAAAGAAACGAAAAAGATTCCGCCTCCCACATTCTCTTTTTAAAGCACGTACTGGATAAACATTGTGG‑GAAATACAATAAAAACCCCTAGAAAAAACGACCGAAGc < 2:2516319/140‑1 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 1:3764936/1‑140 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 1:3866900/1‑140 (MQ=255) ttAATTATTCCTCCAAAAACCCTTAAGATAAAAAACAAACCAAAAAGCTTCCGCCTCCCAAATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGG‑TAAATACAACAACAACCCCTAGAAAAAACGACCGAAGCAcc < 1:847678/140‑1 (MQ=255) ttAATGTTTCCTCAAAAAACCCTCAATAAAAAAAACAAACCAAAAAGCTACCGCCACCAACATTCTATTTTTAAAGCACGTACTTTATAAACTTTGTGT‑CAAATACAACAACACCCCCTAGAAAAAACGACCGAAGCAcc < 1:1701955/140‑1 (MQ=255) ttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAATAACAACCCCTAGAAAACACGACCGAAGCAcc < 2:520835/140‑1 (MQ=255) ttAATGAGTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTATCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAcc < 2:3645135/140‑1 (MQ=255) tAATGATACCACAAAAAACCCTTAAGAAAAAAAACAAACCAAAACGCTTCCGCCCCCAACATTCTATTTTTCACGCACGTCCTGTATAAACTTTGTGG‑CAAATAAAACAACAACCCCTACAAAAAACGACCGAAGCACCa < 1:4255805/140‑1 (MQ=255) attgtttCATCCAAAAACCCTTACTATAAAAAATAAACTAAAAAGGTTCCGCCTCCAAATTTATCTTTTTAAAGCACGTACTGTATAAACATTTTGG‑GAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCat < 2:3392122/135‑1 (MQ=255) tGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCagat > 2:977121/1‑140 (MQ=255) tcctcaAAAATCCCTGTATATATAAAATAAAGTATAATGCTTCCGCCTCCGATATTATTTTTTTAAAGCACGTACTGTATTAACATTGTGG‑GAAATACAAGAACAACCCCTAGATAAAACGACCGAAGCACCATATGTAc < 2:3786214/140‑1 (MQ=255) cccAAAAACCATCAACATAAAAAACAAACCAAAACCCTTCCCCCGCCCACATTCTCTTTTTCAAGCACGTACTGCAAAAACATTGTGG‑TAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAgg < 2:437871/139‑1 (MQ=255) cAAAAACCCTGAACATAAAAAACAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAATGGATAAACATTGTGG‑TAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:4218454/140‑1 (MQ=255) cAAAAACCCTCACCATAAAAAACAAACCAAAAAGCTTCCGCCACCCACATACTCTTTTTCACCCACGTACTGCATAAACATTGTGG‑CAAATACAACACCAACCCCAACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:4835424/140‑1 (MQ=255) aaaaaaCCCTTAATATAAAATAAAAACTAAAAAGCTGCCGCCACCCAAATTCTATTTTTAAAGCACTTAGTGTATAAACTTTGTGG‑TAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:4395093/139‑1 (MQ=255) aaaaaaCCCTTAACAAAAAAAACAAACCAAAACGCGCCCCCCTCCCACTTTCTCTTTTTCAAGCACGTACTGTATAAACTTTGTGG‑TAAATACACCAACACCCCCTACAAAACACGACCGAAGCACCATATGTACAGGtt < 1:106266/139‑1 (MQ=255) aaaaaaCCCTCAATATAAAAAACAAACCAAAAAGCTCCCGCCACCCAAATTCTCTTTTTCACGCACGTACTGTATAAAAATTGTGG‑TAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:3622277/139‑1 (MQ=255) aaaaaaCAATAAACATAAAAAAAAAACCAAAAAGATACCGCCTCCCAAATTATCTTTTTAAAGCACGTACTGTATAAACATTGTGT‑GAAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:4639310/139‑1 (MQ=255) aaacCCCTCAATATAAAAAACAAACCAAACAGCTCCCGCCACCAACATTCTATTTTTCACGCACGTAGTGTATAAA‑ATTGGGGCGAAATACAACACCACCCCACACAAAAAACGACCGAAGCACCATATGTACAGGTTCa < 1:596752/140‑1 (MQ=255) aaaaCCCTTAATATAAAAAACAAACTAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAACAATTGTGG‑CAAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCa < 2:1585963/140‑1 (MQ=255) | AATATTTTCGAGGGTTGCAAAACCGAGCGATACACTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGG‑GAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTA > NZ_CP034943/2269831‑2270101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |