| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,269,984 | G→C | 7.5% | F65L (TTC→TTG) | prsW ← | glutamic‑type intramembrane protease PrsW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,269,984 | 0 | G | C | 7.5% | 936.4 / 7.8 | 369 | F65L (TTC→TTG) | prsW | glutamic‑type intramembrane protease PrsW |
| Reads supporting (aligned to +/- strand): ref base G (185/123); new base C (2/32); total (187/182) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.76e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 375 total aligned reads displayed.
TTGCAAAACCGAGCGATACACTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAA > NZ_CP034943/2269845‑2270123 | ttGCAAAACCGAGCGATACACTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACg > 2:4012899/1‑140 (MQ=255) cacTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTccc > 1:3436830/1‑140 (MQ=255) cacTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTccc > 1:1936327/1‑140 (MQ=255) ttGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCcaca > 2:1966555/1‑140 (MQ=255) gCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACAtt > 1:828979/1‑140 (MQ=255) gCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTACGCCTCCCACAtt > 1:529947/1‑140 (MQ=255) ccGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATtctc > 2:4118915/1‑140 (MQ=255) tataCAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCCCATTCTCttt > 1:2239559/1‑140 (MQ=255) tataCAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCttt > 1:2357454/1‑140 (MQ=255) aaTCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTATTTTTCaa > 2:1187818/1‑140 (MQ=255) aTCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAg > 2:4746062/1‑140 (MQ=255) aTCCCCTCATAATGCTCAGCAAAGTGGGCGGGCGGGTAAAGACTGACCATCAGAATAAACCATTGTAATGATTCCTCCAACAACCCTGACCAGAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAg < 2:501654/140‑1 (MQ=255) tCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGc > 1:3778109/1‑140 (MQ=255) tCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGc > 2:3607660/1‑140 (MQ=255) tCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGc < 2:4406684/140‑1 (MQ=255) tCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGc < 2:1612810/140‑1 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCTTGCGGGTAAACACTGACCATAAGAAAAAACCATTTTAATGATTCCTCCAAAAACACTGAATATAAAAAAGAAACGAAAAAGCTTCCGCCTCCAACATTCTCTTTTTCAAGctgt > 1:2657623/1‑137 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATACACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:3701908/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 1:5176567/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:2863114/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 1:3081919/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:1341588/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:3160881/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAACAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACg > 2:2289124/1‑140 (MQ=255) cGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAAGAAACCATTTTAATGATTCCTCCAAAAACACTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCCAGCACg > 2:861015/1‑140 (MQ=255) gTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGt < 2:3143756/140‑1 (MQ=255) tCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTa < 1:4999711/140‑1 (MQ=255) tCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTa > 1:1126951/1‑140 (MQ=255) cATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 2:4327063/140‑1 (MQ=255) cATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 2:4456180/140‑1 (MQ=255) cATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAc < 1:1867360/140‑1 (MQ=255) cATAATGCACATCAAAGTGGGCGTGCGGGTAAACACTGACCATCACAATAAACCATTTTAATGATTCCGCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCGCCCACATTCTCTTTTTCAAGCACGTAc < 1:4123796/140‑1 (MQ=255) tAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTg < 2:35804/140‑1 (MQ=255) catcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAAc > 1:959045/1‑140 (MQ=255) catcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTATCTTTTTCAAGCACGTACTGGATAAAc > 2:2368846/1‑140 (MQ=255) atcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCGTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACa > 1:2779117/1‑140 (MQ=255) atcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGc > 1:1235681/1‑124 (MQ=255) atcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACa > 1:3059247/1‑140 (MQ=255) atcaAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACa > 1:3716384/1‑140 (MQ=255) tGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTggg < 2:191443/140‑1 (MQ=255) gggCGTGCGTGTAAAAACTGACAATCAGAATAAACAATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCGTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGa < 1:1409747/140‑1 (MQ=255) gggCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGa < 2:274876/140‑1 (MQ=255) gggCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGa < 2:4570386/140‑1 (MQ=255) gggCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGa < 2:3391472/140‑1 (MQ=255) gCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCa > 1:645553/1‑111 (MQ=255) gCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCa > 1:3218036/1‑111 (MQ=255) tGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATAc < 2:2239559/140‑1 (MQ=255) cGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACaa > 2:1854464/1‑140 (MQ=255) gACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTa > 2:2640322/1‑140 (MQ=255) gACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTa > 2:596351/1‑140 (MQ=255) gACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTa > 2:1444311/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGCAATACAAGAACAACGCCTAg > 1:3509574/1‑140 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGaac > 2:170367/1‑131 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCACCTCCCACATTCTCTTTTTCAAGCACGTa < 2:3529217/101‑1 (MQ=255) aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGAAAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCATGCACGTACTGGATAAACATTGTGGGACATACAAGAACACGCCCTAg > 2:4657483/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGaaaaa > 2:214891/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGaaaaa > 2:955459/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGaaaaa > 1:92910/1‑140 (MQ=255) cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAAAAACCCCTAGaaaaa > 2:3212603/1‑140 (MQ=255) taaTAAACCATTTTAATTATTCCACAAAAAACCATTAAGATAAAAAATAAACTAAAACGCTTCCGCCTCCCACATTCTCTTTTTAAAGAACGTACTGTATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAacac < 2:3081913/139‑1 (MQ=255) aaTAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACg > 2:1794216/1‑140 (MQ=255) tAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGAc > 1:273378/1‑140 (MQ=255) ccATTTTAATTATTCATCCAAAAACCCTGAAGATAAAAAAGAACCGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCACGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGaa < 2:2398054/140‑1 (MQ=255) aatttAATGATTCCTCCAAAAACCATCAATATAAAAAAGAAACGAAAAAGCTTCCGCCTCCAACATTCTCTTTTTCAAGCACGTACTGGATAAACTTTGTGGGAAATACAAGAACACCCCCTAGAAAAAACGACCGAAGc < 2:3362100/138‑1 (MQ=255) aTTTTATTGATTCCTCCAAAAACCCTGAACATAAAAAACAAACTAAAAAGCGTCCGCCTCCAACATTCTCTTTTTAAAGCACGTACTGTATAAACATTGTGGTAAAAACAAGAACAACCCCTAGAAAAAACGACCGAAGc < 2:3325994/140‑1 (MQ=255) aTTTTAATTATTCCTCCAAAACCCCGAAACAAAAAAAAAAACCCACAAAGCTTCCGCCTCCAACATTCTATTTTTAAAGCACGTACTGGATAAACATTGTGGTAAATACAACAACACCCCCTACAAAAAACGACCGAAGc < 1:2938906/140‑1 (MQ=255) aTTTTAATTATTCCACAAAAAACCCTGAAGATAAAAAACAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTTTGGGAAATCCAACAACACCCCCTATAAAAAACGACCGAAGc < 2:205403/140‑1 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 1:2130621/1‑140 (MQ=255) tttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAc > 1:4419491/1‑140 (MQ=255) tttAATGATTCCTCCAAAAACACTGAAGATAAAAAAGTAACGAAAAAGCTTCCGCCTCCCAAATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAAAAACCACTAGAAAAAACGACCGACGCaa > 1:2428042/1‑139 (MQ=255) ttATTGATTCCCCCACAACCCCTGAATCTAAAAAACAAACCAAAACGCGCCCGCCTCCCACTTTCTCTTTTTCAAGCACGTACTGGATAAACTTTGTGGTAAATCCAACAACAACCCCTACAAAAAACGACCGAAGCAcc < 1:4298929/140‑1 (MQ=255) ttAATTAGTCCTCAAAAAACACTCAATATAAAAAATAAACCAAACAGCTTCCGCCTCCCACATTCTCTTTTTAAAGCAGGTACTGTATAAAAATTGTGGCAAATACAAGAACAACCCCTATAAAACACGACCGAAGCAcc < 1:4746062/140‑1 (MQ=255) ttAATGTTTCCTCAAAAAACCCTCAATAAAAAAAACAAACCAAAAAGCTACCGCCACCAACATTCTATTTTTAAAGCACGTACTTTATAAACTTTGTGTCAAATACAACAACACCCCCTAGAAAAAACGACCGAAGCAcc < 1:1701955/140‑1 (MQ=255) ttAATGATTCCTCCAAAACCCGTTAACATAAAAAAGAAACCAAAACGCTTCCGCCTCCCACATTATCTTTTACAAGCACGTACTGGATAAACATTGGGGTAAATCCACCAACACCCCCTAGAAAAAACGACCGAAGCAcc < 1:3119290/140‑1 (MQ=255) ttAATGAGTCCTCCAAAAACCCTTAAGATAAAAAAGAAACGAAAACGCTTCCGCCTCCCAAATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAACAACAACCCCTAGAAAAAACGACCGAAGCAcc < 2:247224/140‑1 (MQ=255) ttAAGGATTCCCCCAAAAACCCTGAAGCTAAAAAACAAACGAAAAAGCTGCCCCCGCCCCCATTCTCTTTTTCAAGCACGTACGGGATAAACATTGTGGGAAATACAAGAACAACCCCTACAAAAAACGACCGAAGCAcc < 2:793844/140‑1 (MQ=255) taaaTGATTCATACAAAAACCATCAAGATAAAAAATAAACGAAAAAGCTACCGCCTCCCAAATTATATTTTTCAAGCACGTACTGTATAAACATTGTGGGAAATACAAGACCAACCCCAATAAAAAACGACCGAAGCAcc < 1:4548452/138‑1 (MQ=255) tGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCagat > 2:977121/1‑140 (MQ=255) tcctccAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATCTGTAc > 2:326037/1‑140 (MQ=255) tcctcaAAAATCCCTGTATATATAAAATAAAGTATAATGCTTCCGCCTCCGATATTATTTTTTTAAAGCACGTACTGTATTAACATTGTGGGAAATACAAGAACAACCCCTAGATAAAACGACCGAAGCACCATATGTAc < 2:3786214/140‑1 (MQ=255) cctccAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACa > 1:3959691/1‑140 (MQ=255) cctccAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACa > 2:1573445/1‑140 (MQ=255) cAAAACCCCTTAAGATAAAAAAGAAACGAAAACGCTTCCGCCTCCCAAATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACACCCCCTAGAAAAATCGACCGAAGCACCATATGTACAGGtt < 2:1287847/140‑1 (MQ=255) cAAAACCCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACTTTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACACCCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:2165185/140‑1 (MQ=255) cAAAAACCCTTAAGATAAAAAAGAACCTAAAAAGCTTCCGCCTCCCACATTCTCTTTTTAAAGCACGTACTGCATAAACATTGTGGTAAATACAACAACAACCCATACAAAAAACGACAGAAGCACCATATGTACAGGtt < 2:1045389/140‑1 (MQ=255) cAAAAACCCTGAACATAAAAAACAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTAATGGATAAACATTGTGGTAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:4218454/140‑1 (MQ=255) cAAAAACCCTCATGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTAAAGCACGTAGTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:1091788/140‑1 (MQ=255) aaaacaCCCTGAAGATAAAAAACAAACGAAAAAGCTTCCGCCTCCAACATTCTCTTTTTCAAGAACGTACTGGATAAACATTTTGGTAAATACAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:698828/139‑1 (MQ=255) aaaaaaCCCTTAACAAAAAAAACAAACCAAAACGCGCCCCCCTCCCACTTTCTCTTTTTCAAGCACGTACTGTATAAACTTTGTGGTAAATACACCAACACCCCCTACAAAACACGACCGAAGCACCATATGTACAGGtt < 1:106266/139‑1 (MQ=255) aaaaaaCCCTCAATATAAAAAACAAACCAAAAAGCTCCCGCCACCCAAATTCTCTTTTTCACGCACGTACTGTATAAAAATTGTGGTAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:3622277/139‑1 (MQ=255) aaaaaaCCATTAATATAAAAAACAAACTAACAAGCTGCCGCCTCCCACTTTCTATTTTTCAAGCACGTACTGGATAAACAGTGTGGTAAAGACAAGAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt < 1:1573445/139‑1 (MQ=255) aaaaaaCAATTAAAATAAAAAAGAAACTTAAAAGATTCCGCCTCCCACATTCTCTTTTTCAATCACGTACTGGATAAACTTTGTGGTAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt < 2:3493924/139‑1 (MQ=255) ccccTTAATATAAAAAAGAAACGAAAAAGCTTCCCCATCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATAAAAGAAAAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTa < 2:2501503/139‑1 (MQ=255) aaccTGAATATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATACTTTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAACAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTa < 2:4055223/138‑1 (MQ=255) aCCCTGAAGATAAAAAAGAAACGAAACAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACTTACTGGATAAACATTGTGGGAAATACAAGACCAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTa < 2:481298/140‑1 (MQ=255) aaaaaaGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGaac > 1:1982096/1‑83 (MQ=255) aaaaaaGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGaac > 1:2539769/1‑83 (MQ=255) caaaCCAAAAAGCTTCCGCCTCCCACATTCTATTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTACAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaa < 1:2487732/139‑1 (MQ=255) caaaCAAAAAAGCTCCCGCCGCCCACTTTCTCTTTTAAACGCACGTCCTGGAAAACCATTGTGGTAAATACAACAACAACCCCTACAAACAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaa < 1:1770141/139‑1 (MQ=255) gAAAAAGCTTCCGCCTCCCAAATTCTCTTTTTCAAGAACGTACTGGATAAACATTGTGGGAAATACAAGAACACCCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTtaaataaa < 2:4935407/140‑1 (MQ=255) | TTGCAAAACCGAGCGATACACTTGCCCCGTATACAATCCCGTCATAATGCTCATCAAAGTGGGCGTGCGGGTAAACACTGACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAA > NZ_CP034943/2269845‑2270123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |