| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,584,316 | G→C | 7.9% | E333Q (GAA→CAA) | EO946_RS18420 → | N‑acetylneuraminate synthase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,584,316 | 0 | G | C | 7.9% | 999.8 / 11.2 | 433 | E333Q (GAA→CAA) | EO946_RS18420 | N‑acetylneuraminate synthase family protein |
| Reads supporting (aligned to +/- strand): ref base G (182/182); new base C (2/39); total (185/248) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.57e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 435 total aligned reads displayed.
ATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTGGTG > NZ_CP034943/3584184‑3584454 | aTCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATaaa < 1:785080/140‑1 (MQ=255)aTCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATaaa < 1:5236179/140‑1 (MQ=255) acacTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCt < 2:3652500/140‑1 (MQ=255) tGAATAAAGCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAACAAGTCTCAGa > 1:267948/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:833863/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:2225061/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:1221004/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:1360938/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 2:2073923/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt < 1:5013257/140‑1 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:4287223/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:4176179/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:1845891/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:1874245/1‑140 (MQ=255) aaTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAt > 1:3993376/1‑140 (MQ=255) aTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCATCGAAATAAAAAGTCTAAGAAtt > 2:905400/1‑140 (MQ=255) aTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACCAAATAAAAAGTCTAAGAAtt > 2:606499/1‑140 (MQ=255) aTAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTGAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAAtt > 2:4874163/1‑140 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa < 2:4678491/140‑1 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa < 1:2073923/140‑1 (MQ=255) aaCAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGa < 1:3481202/140‑1 (MQ=255) aaGCTCCAAAACATGCTGAAATGAGAATGCATTAATGCATTTACAAGCCGAGGACGGATTTCCTAAAGTAGCAACTTCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTg < 2:3377202/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:1611564/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa < 2:1492511/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa < 2:2388653/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:4055149/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 2:2574001/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa < 2:3510640/140‑1 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCa > 1:2109496/1‑140 (MQ=255) gCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATGTCCTCAAGTAGCAACTGCTTTTTTATCGTTCCACGAGCCCATTACACCCAACGAAATAAAAGGTCTACGACTTGGGAGTGcc > 1:3192930/1‑139 (MQ=255) cTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAACTCTAAGAATTGCGATTGCAg < 1:2939180/140‑1 (MQ=255) tCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGt > 2:4547860/1‑140 (MQ=255) tCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGt > 2:5031861/1‑140 (MQ=255) aGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCAGTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATg < 2:2181778/140‑1 (MQ=255) aTGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTa > 2:4074137/1‑140 (MQ=255) gCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAgg > 2:4603398/1‑140 (MQ=255) aaTGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTaaa > 1:2482181/1‑140 (MQ=255) cATTAATGCCTTTACAAGCCGAGGACGCATTTCCTAAAGTAGCAACTGCTGATTTATCGTAAAACCAGCCCATTACCCCCAACCAAATAAAAAGTCTAATAATGGCGATTGCAGTGATATGTAGGCTAAACTCGACTCGt < 1:1505386/140‑1 (MQ=255) aTGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACACGTCTGcc > 2:3245199/1‑140 (MQ=255) tGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCg > 1:1452701/1‑140 (MQ=255) ccTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTg > 2:560572/1‑103 (MQ=255) tttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGaaaa > 2:2499583/1‑140 (MQ=255) ttACAAGCCGAGGACGCATTTCCTCAAGTATCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAACTAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTCCCGaaaaa > 1:5187894/1‑140 (MQ=255) ttACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGaaaaa > 2:3731280/1‑140 (MQ=255) gCCGCGGACGCATTCCCTCAAGTAGCAACTGCTGATTTATCTTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTACGATTTGCGTTTGCTGTGATTTGTCGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgct < 1:703492/140‑1 (MQ=255) gCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACCAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCgct < 1:4513506/140‑1 (MQ=255) cccGAGGACGCATTTCCTCAAGTAGCAACGGCTGATTTATCGTTAAACCAGCCCATTACACCCAACCAAATAAAACGTATAAGAAGGGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgct < 1:1142254/139‑1 (MQ=255) ccGAGTACGCATTTCCTAAAGTAGCAACTGCTGTTTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgctg < 2:1331130/140‑1 (MQ=255) cgcggACGCATTTCCTCAAGTAGCAACTGATGATTTATCTTTAAACCAGCCCATTACACCCACCGAAATAAAAAGTCTAAGAATTGCTATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCgctgc < 1:1003462/137‑1 (MQ=255) cggACGCATTTCCTCAAGTATCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 2:3969409/139‑1 (MQ=255) cggACGCATTTCCACAAGTAGCAACTGCTGATTTATCGTAAAACCAGCCCATTACACCCAACGAAATACACAGTGTAAGAATTGCGATTGCAGTGATATGTAGGCTAACATCGACTCGTCTGCCGAAAAAAGCGCTGCTc < 2:3847753/139‑1 (MQ=255) ggACGCATTTCCTCAAGTAGCAACTGCTTTTTTATCGTTAAACCAGCCAATTACACCCAACCAAATAAAAAGTCTAATAATTGCGATTGCAGTGATATTTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 1:1730003/140‑1 (MQ=255) ggACGCATTTCCTCAAGTAGCAACTGCTTATTTATCTTTAAACCCGCCAATTACACCCAACTAAATAAAAATTATAATAATTGCTATTGCTGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 1:1158428/140‑1 (MQ=255) ggACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 2:3162446/140‑1 (MQ=255) ggACGCATTTCCTAAAGTAGCAACTGCTGATTTATCGTAAAACCCCCCCATTACCCCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCCGTCATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTcc < 1:3600908/140‑1 (MQ=255) cttttCCACACGTACCAACTGCTGATTTATCTTTAAACCAGCCCATTCCACCCAACTAAATAAAACGTATAAGAATTGCGTTTGCAGTTATATGTCGGATAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAtt < 2:1064279/138‑1 (MQ=255) aaTTTCCTCAAGTAGCAACTGCTTATTTATCGTTAAACCCGCCCATTCCACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAtt < 2:2306392/139‑1 (MQ=255) aTTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAGAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAACGCGCTGCTCCCTCttt > 1:2720649/1‑140 (MQ=255) tttCCTCAAGTAGCAACTGCTTATGTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTTATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 2:1220333/140‑1 (MQ=255) tttCCTCAAGTAGCAACTGCTGATTTATCTTTAAACCAGCCCATTACACCCAACCAAATAAAAAGTCTAAGAATTGCTATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:3572753/140‑1 (MQ=255) tttCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTCCACCCAACCAAATAAAAAGACTAAGAATTGCGATTGCAGTGATTTGTCGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:3688838/140‑1 (MQ=255) tttCCTAAAGTAGAAACTGCTTATTTATCTTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTTATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:2402952/140‑1 (MQ=255) tttCCTAAAGTAGAAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAACACTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCACCCTATTTa < 2:195627/140‑1 (MQ=255) tttCCACAATTAGCACCTGCTTATTTATCTTTAAACCAGCCCATTACCCCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTa < 1:968271/140‑1 (MQ=255) cTCAAGTAGCAACTGCTTATTTATCGTTAAACCCGCCCATTACACCCAACGAAAAAAAAAGTATAAGAATTGCTATTGCAGTGATATGTCGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt < 1:493087/140‑1 (MQ=255) cTCAAGTAGAAACTGCTTATTTATCTTTAACCCACCCCTTTACACCCAACCAAATAAAAATTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGt < 1:2436668/140‑1 (MQ=255) aaaGTAGAAACTGCTTATTTATCTTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCTGTGTTATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGtat < 2:4335364/139‑1 (MQ=255) aaGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACTGtata > 2:2687041/1‑140 (MQ=255) aaGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTACCTATTTACGGtata > 2:4127599/1‑140 (MQ=255) aGCAACTGCTGATTTATCGATAAACCAGCCAATACCCCCCACCGAACAAAAACGTCTACGAATTGCGATTGCAGTTATATGTAGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCAt < 1:1527124/140‑1 (MQ=255) cAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTATGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTCTTTACGGTATACCAACt > 2:5154694/1‑140 (MQ=255) cAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTAAGGTATACCATCt > 2:3009137/1‑140 (MQ=255) cAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTAGTCTGCCGAAAAAAGCGCTGCTCACTATTTAAGGTATACAATCt > 2:2869947/1‑140 (MQ=255) tATCGTTAAACCCCCCCATTACACCCAACCAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGt < 1:2289629/140‑1 (MQ=255) tCGATAAACCAGCCCATAACACACAACGAAATAACAAGACTAAGAATTGCGAGTGCAGTCATAGGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGttt < 1:4336719/140‑1 (MQ=255) cGTTAAACCAGCCCATTACACCCAACGAACTAAAAACTCTAAGAATTCCGATTGCAGTCATATGAAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTa < 1:4706579/140‑1 (MQ=255) tAAACCCCCCCATTACCCCAACCCAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATc < 1:4805759/140‑1 (MQ=255) tAAACCAGCCCATTACACCCAACGAAATAAACAGTCTAAGATTTCCGATTGAAGTGATTTGTTGGCTAAACTCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATc < 2:3283099/140‑1 (MQ=255) aaaCCAGCCCATTACACCCAACGAAATAAAAAGTCTACGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCa > 1:3908145/1‑140 (MQ=255) aaaCCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTCGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTCTTTAATCa > 1:3090110/1‑140 (MQ=255) aaaCCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCa > 1:3865553/1‑140 (MQ=255) aaCCAGCCCATTACACCAAACCAAATAAAAAGTCTAAGAATTCCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCaa < 1:1702655/140‑1 (MQ=255) gCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCTATTTCAGTGATATGTATGCTAAAATCGACTCGTCTGCCGAAAAAATCGCTGCTCACTATTTACGGTATACCATCTGTTTAACGCTGTTTAATAAATTGcc > 2:401526/1‑140 (MQ=255) gCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAATCGCTGCTCCCTATTTACGGTATAACATCTGTTGAACGCTGTTTAATCAATTGca > 2:4409550/1‑139 (MQ=255) gCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGcc > 2:1552525/1‑140 (MQ=255) gCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGcc > 2:2330577/1‑140 (MQ=255) gCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACCCTGTTTAATCAATTGcc > 2:4950013/1‑140 (MQ=255) aTTACCCCCCCCGAAAGAAAAAGTCTAACAATGGCGATTGCAGTCTTAGGTAGGCAAACAGCCACTCCTCGGCCGAAAAAAGCGCTGCTCCCTATTGACGGTATACCAGCTGTTGAACGCTGTTTAATCAATTGCCGGGc < 2:2839137/140‑1 (MQ=255) aTTACACCCCACCAAATAAAAAGTCTAAGACTTGCGATTGCAGTGATATTTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGc < 1:3255403/140‑1 (MQ=255) aTTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGc < 2:1137386/140‑1 (MQ=255) aTTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGc < 2:186587/140‑1 (MQ=255) aTTAAACCCAACCAAATAAAAAGTCTAATAATTGCGATTGCAGTTATATGTAGGATAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGc < 1:2256010/140‑1 (MQ=255) tACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTAt > 1:2503869/1‑93 (MQ=255) cAACCAAATAAAAAGTCTAAGACTTGCGATTGCAGTTATATTTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTg < 1:4876576/140‑1 (MQ=255) aaCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTgg > 2:1771574/1‑140 (MQ=255) aaCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTgg > 1:3762956/1‑140 (MQ=255) aaCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTgg > 1:4090101/1‑140 (MQ=255) aCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCTACTCGTCTGCCTAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCATGGCTTTCCCTGgt > 1:1082865/1‑140 (MQ=255) aCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTGgt < 1:4648885/140‑1 (MQ=255) aCGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTGgt > 1:254570/1‑140 (MQ=255) | ATCATTACACTGAATAAAACAAGCTCCAAAAGATGCGGAAATGAGAATGCATTAATGCCTTTACAAGCCGAGGACGCATTTCCTCAAGTAGCAACTGCTGATTTATCGTTAAACCAGCCCATTACACCCAACGAAATAAAAAGTCTAAGAATTGCGATTGCAGTGATATGTAGGCTAAAATCGACTCGTCTGCCGAAAAAAGCGCTGCTCCCTATTTACGGTATACCATCTGTTGAACGCTGTTTAATCAATTGCCTGGCTGTCCCTGGTG > NZ_CP034943/3584184‑3584454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |