| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,996,851 | A→T | 10.6% | intergenic (‑157/+49) | purA ← / ← EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,996,851 | 0 | A | T | 10.6% | 805.9 / 20.9 | 271 | intergenic (‑157/+49) | purA/EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Reads supporting (aligned to +/- strand): ref base A (129/107); new base T (2/32); total (132/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.68e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 315 total aligned reads displayed.
AACCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGG > NZ_CP034943/3996712‑3996990 | atcatttCAAAACGATTCTATTCAAACATATCAAGTTTATCATTGAAGATACAGAAAGTCATTTTTAAATCGGAACAGTAAATTATTGTAAATCATTATTCGTTATCTTCCTTTCGTTTTACAAGCGTTTTCTCATCGCa < 2:5084473/136‑1 (MQ=255)acccTTTCAACACGATTCGAGTCAAACACATCAAGGTGATCAGTGAAGACACAGAAAGTCAATTGTAAATCCGAACATGAAATTACTGTAAATCAATATTCGTTCGCTACCATGCGTTTTACAAGCGTTTTCTCATCGCa < 2:2654726/138‑1 (MQ=255)aaacTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:4095065/137‑1 (MQ=255)aaCCTTTCACAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:2073851/140‑1 (MQ=255)aaCCTTTCAAAACTATTCTAGTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:2441793/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACACATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:1230915/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAACTCAAGTTTATCAGTTAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAAGATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:1483433/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:2755715/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:2559830/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:2866753/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:3180421/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:1429180/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:4352430/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:775673/140‑1 (MQ=255)aaCCTTTCAAAACGATTAGATTCACACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTACCTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:2335818/140‑1 (MQ=255)aaCCTGTCACAAAGATTCGATTCAAACAAATCAAGTGTATCAGGGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:1901918/140‑1 (MQ=255) ttCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCTAACATTAAATTAATGTAAATCAATATTCGTTCTCTGCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTc > 1:1396992/1‑140 (MQ=255) ttCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTc > 1:4481792/1‑140 (MQ=255) ttCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTc > 1:2512698/1‑140 (MQ=255) ttCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTc > 2:2305072/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTTGACATCCGAACCTTAAATTAATGTAAATGAATATTCGTTCGGTTGCCTTAGTTTTACATGCGTTTTCTCCTGGCATTGTcc > 1:4194820/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa > 2:1382762/1‑134 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:33603/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:5025781/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTATCATCGCATTGTcc > 2:2776341/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAAGCAAGTTTATCAGGGAAGAAACAGAAAGTCAATTGTAAATCCGACCAGTAATTTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:1333486/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAATGCTCGTGa > 2:3639495/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa > 1:940859/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:4385133/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:4874359/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:3605798/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:961518/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa > 2:2154539/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGGTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:1776595/140‑1 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGACCATTATATTAATGTAAATCAAGATTCGTTCGCTTCCATGCGTTTTTCAAGCGTTTTGTCCTCGCATTGTCCTAAAAAGCTCGGGAAACtt > 1:776614/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAATTTATTGTAAATCTATATTCGTTCGCTTCCATTCGTTTTATAAGCGTTTTCTCACTGCTTTGTCATAAAAAGCTTGCGAAACtt > 2:865718/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAATTTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:1919993/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 2:1668921/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 2:1777015/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:4732516/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 2:4304768/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:569704/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCACTTGTACATCCGAACATGAAATTAATGTACATCAATATTCGTTCGCTTCCCTTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc < 2:4949219/140‑1 (MQ=255) aTCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCa < 1:4263671/140‑1 (MQ=255) tctgTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCAc > 1:3366118/4‑140 (MQ=255) tGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaa < 1:3464451/140‑1 (MQ=255) gaagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaa > 2:2865282/1‑140 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCTTGAAAATTTTATCCTTTAGCACGaaaaa > 2:3036711/1‑140 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaaa > 1:1291842/1‑140 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTGTAGCACGaaaag > 2:3584783/1‑139 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTAGTTCGCTTCCATTCGTTTTAGAAGCGATTTCTCAACGCATTGTCCTAAAAAGATCGTGAAACTTTTATCCTTTCGCACGataaa > 2:3891909/1‑140 (MQ=255) agaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAAAGTAAATCACTATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAag < 2:2719534/140‑1 (MQ=255) aGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAc < 2:374047/140‑1 (MQ=255) aTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGat < 2:1179953/140‑1 (MQ=255) aTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGat < 1:3113801/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 2:4030934/140‑1 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCTCGAAAAAGAGTTACTTGCCTGATATCCCtg > 2:5152207/1‑139 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCtt > 1:2965922/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 1:1552648/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTCGCACGAAATAGAGTTACTTGCCTGATATCCCTTTTGTa > 1:4036193/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 1:2620245/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 2:2333865/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa < 1:2456604/140‑1 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCATTTAGCACGaa > 2:4141675/1‑109 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCAATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaa < 1:4141675/109‑1 (MQ=255) taaattaaTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTa < 1:3558441/90‑1 (MQ=255) attttAAATCAATTTTGGTTCGTTTCATTTCGTTTTACATGCGTTTCATCTGCTCATTTTGCTAAAATGCTCGTGAAACTTTTATCCTTTAGCACCAAAAAGAGTTACTTGCCTTATATCCTTTTTTTATTAATAAAAAc < 2:3521734/136‑1 (MQ=255) tttAATTCATTTTTCTTTCTGTTCCATTTTTTTTAAAAGGGTTTTATCATCGATTTGTCCTAAAAAGCTGGTGAAACTTTTATCCTTTAGCACGAAAAAGTTTTAGTTGCCTGATATCCATTTTTTATTCATAAAAACGa < 2:5223940/138‑1 (MQ=255) ttcaaataaatTTTCTTTCGCTTCCATTCTTTTAACATGCTTTTTCTAATGGCTGTGTCAAAAAAAGCTGGTTAAAATTTTATCCTTTAGCACTAAAAATATTTAGTTGCCTGTTATCCCTTTTGTATTCATAAAAACGa < 2:4198863/137‑1 (MQ=255) ttaaaataaatTTTCGTTCGCTTACATTCTTTTTACAAGCGTTTTCTCATGGCTTTGTCATAAAAAGCTGGTTAAAATTTTATCCTTTAGAACTAAAATTTTTTACTTGCATGATATCCGTTTTGTTTTAAAAAACACGa < 2:560696/137‑1 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 2:3232459/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:1132186/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:3665295/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 2:2048225/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGc > 1:871020/1‑140 (MQ=255) aaTATTCGTTCGCTTCCAGACGTTTTACAAGCTTTTTCTCATCGCATTGTACTAAAAAGCTCTTGAAACTTTTAACCTTTACCACCAAAAACAGTTACTTGCATCATATCCCTTTTGTATTCATAAAAACGACTCGCCaa < 2:1931209/140‑1 (MQ=255) tatTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAAcc > 2:576771/1‑140 (MQ=255) ttCCATTCGTTTTACATTCTTTTTCTCATCGCATTGTCCTAAAAAGGTCGTTAAAATTTTATCCTTTAGCACGAAAAATAGTTACTTGCCTGATATCCGTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCct < 2:1040641/140‑1 (MQ=255) cGTTTTACAAGGTTTTTACCAGCGCTTGTTCATAAAACGAACTTCAAAATTTTATCCTTAACCACAAAAAATATTTACTTGCCTGATATCCTTTTTGTTTTCAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGt < 1:2273131/140‑1 (MQ=255) tttaACAAGCTTTTTCTAATCGCTTTGTCATAAAAAGCTCGTGAAACTTTTATCCTTTAGCACTAAAAAGAGTTACTTGCCTGATATCCATTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 2:3383413/140‑1 (MQ=255) ttACATGCTTTTTCTCATCGCATTGTCCAAAAATGCTCTTCAAACTTTTATCCTTTACCACTAAAAATTGTTAGTTGCGTTATATCCCTTTTTTATAAAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACg < 1:3749700/140‑1 (MQ=255) tACAAGCGTTTTCTCATCTCATTGTCCTAAAAAGCTCGTGAAATTTTTATCCTTTAGCACGAAAAAGTGTTAGTGGCGTTATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGc < 1:4923793/140‑1 (MQ=255) tACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCTCCAACCGTCCGGATCCTCTATCGTCACGc > 2:4390464/1‑140 (MQ=255) tACAAGCGTTTTCACCTCGCATTGTCATAAAAAGCTCGGCAAACTTTTATCCTTTCCCACTAAAAAGTGTAACTTGCCGCATATCCCTTTTTTATCCATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGc < 1:3977168/140‑1 (MQ=255) acacgggTTTTCTCATCGATTTGTCCTAAAAAGGTCTTTAAATTTTTATCCTTAACCACCAAAAATAGTTAGTTGCCTTATAGCCCTTTTTTATTCATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGcc < 1:1658539/134‑1 (MQ=255) aGCTTTTTCTCATCGAATTGTCCAAAAACGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTTTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTcc < 2:4996170/140‑1 (MQ=255) ggtttttCTCATCGCTTTGTCAAAAAACGCTCGTTAAACTTTTATCCTTTAGCACCAAAAAGAGTTAGTTGCCTGATATCCATTTTTTATAAATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 1:198405/137‑1 (MQ=255) gctttttCTCATCGCTTTTTCATAAAAAGATCTTTAAATTTTTATCCTTTAGCACTAAAATGAGTTATTTGCCTGATATCCCTTTTTTTTTAAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 1:3475664/137‑1 (MQ=255) gctttttCTAATCGATTTGTCATAAAACGGTCGTGAAACTTTTATCCTTTCGCACTAAAAAGATTTACTTGCGTGTTATCCCTTTTTTATAAAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 1:2368560/137‑1 (MQ=255) gCGTTTTATAATCTCTTTGTCCTAAAAAGCTCGTTAAACTTTTATCCTTTAGCACTAAAAATAGTTACTTGCCTTATATCCATTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 2:1542115/140‑1 (MQ=255) ctttttCACATCGATTTGTACAAAAAAGCTCGTAAAAGTTTTATCCTTTAGCACCAAAAAGAGTAACTTGCCTGACATCCCTTTTGTATTCAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 1:694079/138‑1 (MQ=255) tttCTCATCGCATGTTCCTAAAAAGCTCGTTAAACTTTTATCCTTGCGCACAAAAAAGAGTTAATTGCCTCATATCCCTTTTGTTTTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 1:4774739/140‑1 (MQ=255) tttCTCAGCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTGAGCACCAAAAAGAGTTCCTTGCCTGATAGCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 2:158586/140‑1 (MQ=255) tttATCACCGCAGTGTCCTAAAAAGCTCGTCAAACTTTTATCCTTTCCCACCAAAACGAGTTACTTGCCTCATATCCCTTTTGTATACATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 1:2899818/140‑1 (MQ=255) ttCACATCGCATTGTCCAAAACAGCGCGTCAAACTTTTATCCTTTCGCACCAAAAATAGTTAGTTGCCTCATAGCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCt < 1:3819126/140‑1 (MQ=255) tctcATCGAATTTTCCTAAAAAGCTGGTTAAACTTTTATCCTTTACCACGAAAAAGAGTTACTTGCCTTATATCCCTTTTGTTTTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTc < 2:3087524/140‑1 (MQ=255) tCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa > 2:4475031/1‑140 (MQ=255) tCGCATTGTCCAAAAACGCTCTTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATAGCCCTTTTGTATTCATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa < 2:4796551/140‑1 (MQ=255) tCGCATGGGCCTAAAAACCTCGTCAAACTTTTAGCCTTTAGCACGAAAAAGAGTTAGTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa < 2:3459472/140‑1 (MQ=255) cGCTTTGTCATAAAAAGCTCGTGAAACTTTTAGCCTTTAGCACCAAAAAGAGTTTCTGGCCTGATATCCCTTTTGTATTAATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTAc < 1:1533254/140‑1 (MQ=255) | AACCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGG > NZ_CP034943/3996712‑3996990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |