| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 607243 | 377 (1.500) | 23 (0.100) +CGGACCAG |
7/254 | 9.1 | 7.7% | coding (86/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607675 = | 208 (0.830) | coding (518/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607107‑607243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAC > NZ_CP034943/607675‑607801 |||||||| cacGGACCACACGGAGCACAAGGACCCCCAGGACCACCAGGACCACAAGGACTGCCGGGAGTCACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACCGGAGCCACAGGGGCTACTGGGGAAGCCGG < 2:2602501/137‑1CAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGG < 2:1131484/140‑1 ACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCGACGGGAGCTACTGGGGAAGCAGGACCAG > 1:930329/1‑140 ACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACCGGAGCCACGGGAGCTACGGGGGAAGCGGGACCAG > 2:3654210/1‑140 CACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCGACTGGGGAAGCGGGACAAGCC > 2:406432/1‑140 ACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCGACGGGAGCTACCGGGGAAGCGGGACCCGCCG > 2:2732332/1‑140 ACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCCCCGGAGCTACTGGGGAAGCAGGACCAGCCG > 2:2538568/1‑140 CAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGGGCGACGGGAGCCACGGGCGCTACTGGGGACGCAGGACCAGCCGG > 2:2941316/1‑140 ctGACCACCAGGACCACCAGGCCCACCAGGACAGCCGGGAGTCCTGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGCGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAG < 2:2684502/138‑1 ACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCGGCGCTACTGGGGACGTCGGACCAGCCGGAGCGCCAGGAGCGACCG > 2:3655675/1‑140 AAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCGACCGGGGCTACGGGTGAAGCAGCACCGGCCGGACCTACCGGAGCTACCGGG > 2:231888/1‑140 TGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACCGGCGCTCCGGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACAGGGGAACCCGGACCACCCGGACCGACAGGAGCTACCGcg > 2:2262497/1‑138 GCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAC > 1:3483836/1‑104 CTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCGACAGGGGCAACTGGCGACGACGGACCAGCC > 2:1649521/1‑140 ACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGG > 1:3200314/1‑68 TGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAC < 1:1941828/63‑1 TGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAC > 2:1941828/1‑63 cgactgCGGACCTCCCGGCGCGACAGGCGCTACGGGGGAAGCGGGACCAGCCGGAGGGACAGGAGCTTCGGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGA < 2:2856237/134‑1 GAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAC < 2:2379771/140‑1 GAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGG < 1:937522/35‑1 GAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGG > 2:937522/1‑35 GAAGCCGGACCACCCGGAGCCCCAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGAAGTCGGACCAGCCGGAGCGAC < 2:666202/140‑1 AAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGG < 2:1696005/43‑1 AAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGG > 1:1696005/1‑43 ggCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACA < 2:2791432/55‑1 GCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCAC < 2:1947327/101‑1 GCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACA > 1:297939/1‑57 GCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACA > 1:2791432/1‑57 GCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACA < 2:297939/57‑1 |||||||| CAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/607107‑607243‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAC > NZ_CP034943/607675‑607801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |