BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 607646	214 (0.860)	3 (0.010) +ACGGGAGCC	3/248	11.3	1.4%	coding (489/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	607683 =	227 (0.900)	3 (0.010) +ACGGGAGCC	3/248	11.3	1.4%	coding (526/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 215 total aligned reads displayed.

GACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACG  >  NZ_CP034943/607507‑607782

  cccgCTGGCGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACCGGGGCTTCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                                        <  2:1192079/137‑1 (MQ=17)

  ccAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                                        <  1:157058/140‑1 (MQ=255)

     gCTGGAGCGACGGGAGCGACAGGTGCTACCGGGGAAGCCGGACCAGCCGGTGCCACGGGAGCCACAGGCGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                                     <  1:2732332/140‑1 (MQ=255)

     gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCTCCCGGGGCCACGGGAGCCACCGGGGCTTCTGGTGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                                     <  1:2789133/140‑1 (MQ=17)

     gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                                     <  1:1797561/140‑1 (MQ=255)

     gCTGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCGACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                                     <  1:1241409/140‑1 (MQ=255)

     ccTGGCGAGACGGGTGCGACAGGAGCTACCGGGGAAGGCGGACCAGCCCGGGCGACGGGAGCCACCGGCGCAACTGGGGAAGCCGGACCAGGGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                                     <  1:2538568/139‑1 (MQ=14)

      ccggAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                                                                                                                                    >  1:485263/3‑140 (MQ=255)

          aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCAACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGAACACCCGGAGCGACAGGAGcca                                                                                                                                >  1:1121133/1‑138 (MQ=14)

           gtcatgggAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACCGGAGCGACAGGGGCAACGGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCGGGGGCACCCGGGGCGCCCGGAGCGAc                                                                                                                               >  2:3625369/6‑140 (MQ=11)

               cGGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCATCAGGCGCTACTGGGGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                                                           <  1:2228108/140‑1 (MQ=14)

                gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                                                                <  2:2503948/134‑1 (MQ=255)

                   aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                       <  1:3771582/140‑1 (MQ=255)

                        cAGGAGCTCCCGGGGAACCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGCACCCGGACCACCCGGAGCGACAGGTGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                  <  2:3433106/140‑1 (MQ=18)

                         aGGAGCGCCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCGACAGGGGCGACTGGGGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                                 <  2:3077616/140‑1 (MQ=18)

                          ggAGCTCCCGGGGCAGCCGGACCAGCGGGGGCAACGGGAGCCACAGGCGCTACTGGGGAAGCCGGAGCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAcc                                                                                                                <  1:2932635/140‑1 (MQ=18)

                           gAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCa                                                                                                               <  2:485263/140‑1 (MQ=255)

                                aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGACGGACCAGCCGGAGCGACAGGAGCTACCGGCGAAGCAGGACCAGCCCGATCGACAGGAGCGACCGCGGAAGCAGCACCAACCgg                                                                                                          >  1:3041800/1‑140 (MQ=17)

                                     ggAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                          >  1:102806/1‑135 (MQ=255)

                                     ggAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                          <  2:102806/135‑1 (MQ=255)

                                      gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGAc                                                                                                    >  1:1885125/1‑140 (MQ=255)

                                      gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                    >  1:1510376/1‑140 (MQ=255)

                                      gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                    <  1:2370410/140‑1 (MQ=255)

                                         gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGTGGAAGCCGGACCAGCCGGAGCTACAGGAGCTTCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                 <  1:1344175/140‑1 (MQ=255)

                                         gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                            >  1:1713973/1‑129 (MQ=255)

                                           cGGACCAGCCGGGGCGACTGGAGCCACCGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                               <  1:2957437/140‑1 (MQ=255)

                                           cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                               >  1:1625362/1‑140 (MQ=255)

                                           cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                               >  1:1445685/1‑140 (MQ=255)

                                           cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCACCCGGAGCGACCGGAg                                                                                               >  1:1433978/1‑140 (MQ=255)

                                                       ggCCCCGGGAGCCCGAGGTGCTACTGGGGCAGCCGGACCCGCGGGAGCGACTGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                   <  1:1324929/140‑1 (MQ=14)

                                                        gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                                        <  2:3194335/86‑1 (MQ=255)

                                                        gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                                        >  1:3194335/1‑86 (MQ=255)

                                                            cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAACCGGAGCGACAGGAGCGACCGGGGCAGCCGGa                                                                              >  2:2558383/1‑140 (MQ=255)

                                                            cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                              >  2:815253/1‑140 (MQ=255)

                                                            cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACa                                                                                                                                       <  2:2113987/83‑1 (MQ=18)

                                                             gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                             <  1:3581666/140‑1 (MQ=255)

                                                                  ccACAGGCGCTCCTGGGGAAGCCGGACCAGCCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                        <  2:2225599/140‑1 (MQ=255)

                                                                   cacaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCg                                                                       >  2:2787648/1‑140 (MQ=255)

                                                                   cacaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCAGGACCAGCCGGAGCGACAGGAGCTACAGGGGAACCCGTACCAACCGGAGCCACAGGAGCTACCGGGGAACCCGCACCAGCCg                                                                       >  1:243086/1‑140 (MQ=14)

                                                                    cccggcgCTACGGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCGACCGGGGCCGCCGGACCAGCCGGCGCGACAGGAGCTACCGGGGAACCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                      <  1:1316940/134‑1 (MQ=11)

                                                                    actggagCTACTGGGGAATCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGGCCAGCCgg                                                                      <  1:2262497/134‑1 (MQ=255)

                                                                        gggCTACTGGGGCAGCCGGACCACCCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCg                                                                  <  2:2865003/140‑1 (MQ=255)

                                                                          gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                    >  1:3483836/1‑104 (MQ=35)

                                                                           cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGCCGCAGGCCCACGCGGAGCGCCCGGAGCGACCGGCGCGCCCGGAGCTGCCGGACCggcg                                                               >  1:3135917/1‑137 (MQ=2)

                                                                             acagcggAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGCAGCCGGACCCCCCGGAGGGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                             <  2:3305098/135‑1 (MQ=11)

                                                                             aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                             <  1:2762597/140‑1 (MQ=255)

                                                                             aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGCGCCGCCGGACCAACCGGAGCGAGAGGAGCTACCTGAGCGCCAGGAACAGACGGAGCgtgagt                                                             >  2:686071/1‑135 (MQ=11)

                                                                             aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACACGAGCGACCGGGGACGCCGGCACAGCCGGACCGGCCTGATCAACCGCCGAGGCAGGACCTGCCGGAGCGActgc                                                             >  2:2421663/1‑137 (MQ=2)

                                                                               tGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                                                                        <  1:1941828/63‑1 (MQ=37)

                                                                               tGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGCGACGCCGGACCAACAGCAGCGACAGGAGCTACCTGGGAACACGGACCACCCCGACAGACAGGAg                                                           >  2:2918867/1‑140 (MQ=11)

                                                                               aggccccgCCGGAGCCACCGGAGCCACCGGAGACCCCGGTCAACACGGACCAACCGGACCCCCAGGAGCTACCGGCGATCCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                           <  2:3617799/133‑1 (MQ=2)

                                                                                ggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                              >  2:1957214/1‑120 (MQ=35)

                                                                                ggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                              <  1:1957214/120‑1 (MQ=35)

                                                                                  ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCAGGACCACCCGGAGCGACAGGAGcga                                                        >  2:3707871/1‑138 (MQ=255)

                                                                                    aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTAcc                                                      >  1:2121652/1‑140 (MQ=255)

                                                                                    aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                      >  2:2750174/1‑140 (MQ=255)

                                                                                    aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAGCAGGACCAACCGGAGCGACAGGAGCAACAGGCGAAACAGGAACAGCCGGAGCTACAGGAGCTAcc                                                      >  1:3145995/1‑140 (MQ=14)

                                                                                      gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACa                                                                                                                                       >  1:2791432/1‑57 (MQ=35)

                                                                                      gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCCACCGGAGCTACCCGGGACGCGGTACAAGCCGGAGCGACCGGAGCTCCCgg                                                    >  2:2655044/1‑140 (MQ=14)

                                                                                      gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                    >  2:2061583/1‑140 (MQ=255)

                                                                                      gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGCCAGGAGCTACCgg                                                    >  2:231988/1‑140 (MQ=255)

                                                                                      gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                    >  2:3129213/1‑140 (MQ=255)

                                                                                      gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGTCCCACCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTCCCgg                                                    >  2:1567601/1‑140 (MQ=14)

                                                                                        cGGACCAGCCGGGGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                <  2:410335/126‑1 (MQ=38)

                                                                                        cGGACCAGCCGGGGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                >  1:410335/1‑126 (MQ=38)

                                                                                        cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                  >  2:149166/1‑140 (MQ=255)

                                                                                             cAGCCGCAGCGACAGGCGCTTCCGGGGAAGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                             <  2:622556/140‑1 (MQ=14)

                                                                                                ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCCGCCGGAGCGACAGGAGCTCCCGGCGCAGCCggc                                          >  2:113079/1‑139 (MQ=14)

                                                                                                ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                          >  1:1751537/1‑140 (MQ=255)

                                                                                                    aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCaa                                      >  1:629944/1‑140 (MQ=255)

                                                                                                     gCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCCGGAGCGACCGGGGAACCCGGACCAAc                                     >  2:2943067/1‑140 (MQ=14)

                                                                                                     gCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc                                     <  2:2879068/140‑1 (MQ=255)

                                                                                                              gCTACCGGTGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                            <  1:3721428/140‑1 (MQ=255)

                                                                                                               cTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACGGGAGCGACCGGGGACGCCGGGCCAGCCGGAGCgccc                           >  2:2680210/1‑137 (MQ=11)

                                                                                                                 aCCGGGGACGCCGCACCCGCCCGAGCGACAGGAGGGACCGGGGAAGCCGGACCAACCGGAGCCACCGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                         <  1:551488/140‑1 (MQ=14)

                                                                                                                 aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                             >  1:3427100/1‑88 (MQ=38)

                                                                                                                 aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                         <  1:3620459/140‑1 (MQ=255)

                                                                                                                  ccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGa                        <  1:2389415/140‑1 (MQ=255)

                                                                                                                   cGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGATCAACAGCGGAAGCCGGACCACCCGGAGCGGCCGGAg                       >  2:149449/1‑140 (MQ=11)

                                                                                                                       gcacccGGACCACCCGGAGCGCCCGGAGCTACCGGCGAAGCCGGACCAACCGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                   <  1:2676504/136‑1 (MQ=14)

                                                                                                                       gAAGCCGGGCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                   <  2:1660866/140‑1 (MQ=255)

                                                                                                                       gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACAAGCCGGGGCGACAGGAGCTACCGGGGAAGCCGGACGCAGCGGCGCGTCTGGAGCcac                   >  2:2289733/1‑140 (MQ=11)

                                                                                                                       gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                   <  1:2061583/140‑1 (MQ=255)

                                                                                                                       gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                   <  1:3779568/140‑1 (MQ=255)

                                                                                                                       gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAACCAGGACCATCAGGAGCGACCGGAGacac                   >  2:188179/1‑140 (MQ=11)

                                                                                                                        caGCCGGAGCCCCCGGAGCGACAGGCGCTCCCGGGCCAGCCGGACCAACCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCcaca                  <  2:753907/139‑1 (MQ=14)

                                                                                                                          gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                <  1:1163281/92‑1 (MQ=37)

                                                                                                                          gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                >  2:1163281/1‑92 (MQ=37)

                                                                                                                          gCCGGACCACCCGCCGCCACAGGAGCTACGGGCGACGCCGGACCAACCGGTGCTTCTGGAGCTTCCGGGGACGCGGGACCCTCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                <  2:1727815/140‑1 (MQ=14)

                                                                                                                            cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg              <  2:1625362/140‑1 (MQ=255)

                                                                                                                            cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg              <  1:2562783/140‑1 (MQ=255)

                                                                                                                            cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg              <  1:2025583/140‑1 (MQ=255)

                                                                                                                               aCCAGCCGGAGCGACAGGAGCTACCGGTGCACCCGGACCACCCGGCGCCCCAGGAGCCCCCGGCGCCACCGGAGCCCCCGGAGCGACAGGCGCTACCGGACAAGCCGGCGCCACGGGAGCGACAGGCGCGACGGGGGcag           >  1:2856237/1‑138 (MQ=2)

                                                                                                                                 aaGCGGGATCGACAGGAGGTAACGTGTCAGCGGTCCCATGCGGATCGACAGGTGCTACCGGGGAAGCCGGACCAGCCGGAGCTACAGGAGCTACCGGGTAAGCCGGACGAACCGGAGCGACGGGAGCCACAGGGGCTACt         <  1:1671687/139‑1 (MQ=14)

                                                                                                                                    ccGGAGCGGCAGGAGCTACCGGTGAAGCCGGACCAACCGGAGCCACTGGAGCTACCGGCGAAGCGGGAGCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg      <  1:3284438/140‑1 (MQ=17)

                                                                                                                                    ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGcc                     <  2:1265044/125‑1 (MQ=255)

                                                                                                                                    ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg      >  2:3368689/1‑140 (MQ=255)

                                                                                                                                        aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg  <  1:3368689/140‑1 (MQ=255)

                                                                                                                                        aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg  <  1:815253/140‑1 (MQ=255)

                                                                                                                                         gCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                       >  2:665698/1‑54 (MQ=35)

GACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACG  >  NZ_CP034943/607507‑607782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.