Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0540CG33.7% 271.7 / 49.8 174E573Q (GAA→CAA) EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (42/72);  new base G (58/0);  total (102/72)
Fisher's exact test for biased strand distribution p-value = 1.15e-18
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 187 total aligned reads displayed.

TCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATC  >  NZ_CP034943/633915‑634192
                                                                                                                                           |                                                                                                                                           
   gCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttcttt                                                                                                                                          >  2:2318278/1‑140 (MQ=255)
    cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGTTCACATAGAAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGgtgtttg                                                                                                                                         >  1:573802/1‑139 (MQ=255)
    cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGgtctttg                                                                                                                                         >  2:1292103/1‑139 (MQ=255)
    cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctttc                                                                                                                                         >  2:3347590/1‑140 (MQ=255)
    cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttcttta                                                                                                                                         >  1:701492/1‑139 (MQ=255)
    cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGgtctttg                                                                                                                                         >  1:3097097/1‑139 (MQ=255)
        gatggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCtttt                                                                                                                                     >  2:1725418/1‑140 (MQ=255)
          tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGtttttg                                                                                                                                   >  1:2899713/1‑139 (MQ=255)
          tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGTGCGGTGTTTGtttttg                                                                                                                                   >  1:3369971/1‑139 (MQ=255)
            gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTGTCtttttgcc                                                                                                                                 >  2:2578991/1‑137 (MQ=255)
            gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTCTTTTTGCa                                                                                                                                 >  1:2132765/1‑140 (MQ=255)
            gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTTGGTTGTTTTTGCa                                                                                                                                 >  1:1648063/1‑140 (MQ=255)
              ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGATTCTTTTTACaat                                                                                                                               >  2:1819828/1‑138 (MQ=255)
                 tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTACATTCtt                                                                                                                            >  2:1955028/1‑140 (MQ=255)
                 tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTCTTTTTCCaatatt                                                                                                                            >  2:2347879/1‑135 (MQ=255)
                     ttttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc                                                                                                                        <  1:1167551/140‑1 (MQ=255)
                      tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGGGTTCTTTTTCCATTAtttttat                                                                                                                       >  2:2528447/1‑138 (MQ=255)
                       ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTACATTCGTTttatt                                                                                                                      >  2:3710856/1‑140 (MQ=255)
                       ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGATTTTCCATTCTTTttctt                                                                                                                      >  2:2046771/1‑140 (MQ=255)
                       ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTGCATTCTTTttgtt                                                                                                                      >  2:2312466/1‑140 (MQ=255)
                        tCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCCCTTATTTttctta                                                                                                                     >  2:706925/1‑139 (MQ=255)
                           tGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTGCATTCTTTttattatta                                                                                                                  >  2:1775565/1‑139 (MQ=255)
                           tGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGCTTTCTTTTTCCATTCATTttcttattc                                                                                                                  >  2:2995952/1‑140 (MQ=255)
                              tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACATTATTTTTCTTCTTAata                                                                                                               >  2:1811958/1‑140 (MQ=255)
                               cTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGGTTTTTTTTTCATTATTTTTGTTGTTGatat                                                                                                              >  1:1631536/1‑140 (MQ=255)
                                ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTACATTCTTTTTCTTCTTCATATg                                                                                                             >  2:2772477/1‑140 (MQ=255)
                                ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg                                                                                                             <  2:2141960/140‑1 (MQ=255)
                                ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg                                                                                                             <  1:3057914/140‑1 (MQ=255)
                                  gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGaa                                                                                                           >  2:808130/1‑140 (MQ=255)
                                      gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGtt                                                                                                      <  1:2263927/140‑1 (MQ=255)
                                       aTTTCCGGATCACATATCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTATTCAATCCGACGGAGTCGTTGGCGGGCGTTCTTTTTCCCATATTTTTATTATTCAAAAGaaatatt                                                                                                      >  1:2638943/1‑135 (MQ=255)
                                       aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACATTATTTTTATTATTAATATTAA‑AGttt                                                                                                     >  2:871360/1‑140 (MQ=255)
                                        tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTATTTTTCCAATCTTTTTCTTCTTAATATGAA‑CGattt                                                                                                    >  2:2261128/1‑140 (MQ=255)
                                         ttCCTGATCACATAGCAATTCATCGTTATGACTAATTTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATACGACGGAGTCGTTTGCGTTCTTTCTTTTTCCATTCTTTTTATTTTTCATAAGAA‑AGgtttt                                                                                                   >  2:1021883/1‑139 (MQ=255)
                                         ttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTGTTACAATCTTTTTCTTATTAAAATTAA‑cagtatt                                                                                                   >  1:2767471/1‑134 (MQ=255)
                                         ttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGGCTTTGTTTTTCGATTCGGTTTCTTAGTCATAAGAACCGtttt                                                                                                    >  1:3119635/1‑140 (MQ=255)
                                            cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGt                                                                                                <  1:2472925/140‑1 (MQ=255)
                                            cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGt                                                                                                <  1:2802832/140‑1 (MQ=255)
                                            cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGt                                                                                                <  2:2649993/140‑1 (MQ=255)
                                            cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGt                                                                                                <  2:401541/140‑1 (MQ=255)
                                            agacagacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGt                                                                                                <  1:1430154/134‑1 (MQ=255)
                                            acagtCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGt                                                                                                <  1:743543/136‑1 (MQ=255)
                                                      aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAAc                                                                                      <  1:3412565/140‑1 (MQ=255)
                                                           ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGGTGGTTGTTTTTGCCATGTTTTTGTTGTTGATATTAA‑ACTTTTTTGTGAGGCGTAACCGaac                                                                                 >  1:1225955/1‑139 (MQ=255)
                                                           ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTGTTTTTCCCGTGTTGTTGTTGTTGATATGAA‑CGTTTTGTGTGAGGCGTATCCGacg                                                                                 >  1:260021/1‑138 (MQ=255)
                                                             cATCGTTATGACTAATGTTTTCTTCAATGTTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTCCAATCTTTTTCTTCTTCATATTAA‑AGATTTTATTCAAGCTTAAACGAAGCa                                                                               >  2:2419504/1‑140 (MQ=255)
                                                             cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTGTTTCTTTTTACATTCTTTTTGTTGTTAATATTAA‑AGTTTTTATTAAGGCTTAACCGAAGCa                                                                               >  2:978579/1‑140 (MQ=255)
                                                             cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCCTTCTTTTTCTTGTTAATATGTA‑CGGTTTTGGTCAGGCGTAAcccggtct                                                                               >  2:1430154/1‑134 (MQ=255)
                                                             cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCCATTCTTTTTATTATTAATATGAA‑CGGTTTGAGTCAAGCTTAACAGAAGCa                                                                               >  2:1976728/1‑140 (MQ=255)
                                                             cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTACATTGTTTTTATTATTCATATGAA‑AGTTTTTTGTAAGGCTTAAACGAAGCa                                                                               >  2:760083/1‑140 (MQ=255)
                                                             cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTACAGTCTTTTTCTTCTTCATATGAA‑AGTTTTGAGTCAGGCGTAACCGAAGCa                                                                               >  2:694061/1‑140 (MQ=255)
                                                             cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTTGTTTCTTTTTCCATTTTGTTTGTTGTTGATTTGAG‑CGTGTTGTTTGAGGCTTAAACGAAGcc                                                                               >  1:3724542/1‑139 (MQ=255)
                                                              aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTGCATTCTTTTTCTTCTTCATATGAA‑CGTTTTTAGTCAGGCTTAAACGAAGCAg                                                                              >  2:1612036/1‑140 (MQ=255)
                                                              aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACATTCTTTTTATTATTCATATGAA‑CGGTTTGAGTCAGGCTTAACCGAAGCAg                                                                              >  2:1926216/1‑140 (MQ=255)
                                                                      gACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGttttt                                                                      <  1:1292103/140‑1 (MQ=255)
                                                                       aCTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGtttttt                                                                     <  2:118983/140‑1 (MQ=255)
                                                                          aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCCTTATTTTTATTCTTAATATGAA‑AGTTTTGTGTGAGGCTTAACCGAAACAGGGGGTTTTTggg                                                                  >  2:928165/1‑140 (MQ=255)
                                                                            tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTGTTTGCCTTGTTTTTTTTGTTGATATTTA‑CGGTTTTTGTCAGGCTTAAACGTAGCAGGGGTTTTTTTggtt                                                                >  1:2849556/1‑138 (MQ=255)
                                                                            tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTATTTTTGCATTCTTTTTGTTATTGATATTAA‑CGGTTTTTGTGAGGGTTTAACGAAGCATGCGTTTTTTTGGAt                                                                >  2:1293919/1‑140 (MQ=255)
                                                                            tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGTTTGGTTTTTCATTGTTTTTTTTCTTGATATTAA‑CGGTTTTTGTGAGGGGTTAACGAAGCCGGCGGTTTTTTgggt                                                                >  1:2417918/1‑138 (MQ=255)
                                                                                ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCCCTTATTTTTCGTCTTCATAAGAA‑CGATTTGAGTCAGGCATAAACGACGCAGGCGTTTTTTGTGGTTCct                                                            >  2:2082504/1‑140 (MQ=255)
                                                                                ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTGTTTGTTTTTGCATTCTTTTTGTTCTTCATATGTA‑ACTTTTTAGTCAGGGGTAAACCAAACAAGCGTTTTTTAGGATTAct                                                            >  1:3701428/1‑140 (MQ=255)
                                                                                       aTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAATATTTTTATTATTCATATTAA‑CCTTTTTATTCAGGCTTAACCGAAGCATGCGTTTTTTAGGAATACTATTGGTg                                                     >  2:2409630/1‑140 (MQ=255)
                                                                                             tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTCCATTATTTTTATTGTTAATATGAA‑CGTTTTTATTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTACTCTTTCTGagtgat                                               >  2:1644124/1‑135 (MQ=255)
                                                                                                   gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc                                         <  2:174718/140‑1 (MQ=255)
                                                                                                    tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTGTTTTTCTTCTTCATATGAA‑CGTTTTGTGTGAGGCTTAAACGAAGCAGGGGTTTTTTAGGATTGCTCTTTGTGATTAAttttttgc                                        >  2:1162746/1‑136 (MQ=255)
                                                                                                    tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑AGTTTTTAGTAAGGCTTAACCGAAGCAGGCGTTTTTTAGGATTACTCTTGGTGATTAAATTTCTcc                                        >  2:3864488/1‑140 (MQ=255)
                                                                                                    tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTCCATTGTTTTTGTTCTTCATATTAA‑CGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGATTCCTCTTGCTGTTTGAttttatac                                        >  2:445627/1‑136 (MQ=255)
                                                                                                    tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTGTTTTTCTTCTTCATATGAA‑AGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGCTTCCTCTTGCTGATTCAttttatac                                        >  2:2705271/1‑136 (MQ=255)
                                                                                                    tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTcc                                        >  2:59989/1‑140 (MQ=255)
                                                                                                    tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTGCCTTCTTTTTGTTGTTCATATGAA‑CGTTTTTTGTCCGGCTTAACCGAACCAGGCGTTTTTTCGGAGTCCGCTTGGGGATTCATTTTATcc                                        >  2:1560533/1‑140 (MQ=255)
                                                                                                    tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTGCATTCTTTTTGTTGTTCATATTAA‑CGGTTTTAGTGAGGCTTAAACGAAGCATGCGTTTTTTAGGATTCCTCTTGCTGATTCATTTTGTcc                                        >  2:725196/1‑140 (MQ=255)
                                                                                                    tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTTTTTTCATTATTTTTATTTTTCATATGAA‑AGGTTTGTGTGAGGGTTAACCCAAGCAGGCGTTTTTTGGGTTTGCTCTTGCTGATTAAttttatac                                        >  1:3790716/1‑136 (MQ=255)
                                                                                                     ggCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTATTTTTACATTCTTTTTGTTATTAATATGAA‑CGTTTTTATTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGGTTACTCTTTGTGATTAAttttgctgt                                       >  2:579347/1‑135 (MQ=255)
                                                                                                       cTTCAATTTCTTCAATCCGACGGAGTCGTTGGCCTTCTTTCTTTTTCCATTCAGTTTCTTCATCATATGAA‑CGTTCGGAGTCAGGCTTACCCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAt                                     <  1:1518247/140‑1 (MQ=255)
                                                                                                         tCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTGTTTTTACCTTCGTTTTGTTGTTCAAATGAA‑AGTGTTTTTTGAGGGTTAAACGAAGCAGGCGTTTTTTTGGATTAGTCTTTCGGATTAATTTTTTACaaata                                   >  1:858617/1‑137 (MQ=255)
                                                                                                          cAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCa                                  <  2:3784450/140‑1 (MQ=255)
                                                                                                            aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                <  1:2038698/140‑1 (MQ=255)
                                                                                                            aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                <  1:1784909/140‑1 (MQ=255)
                                                                                                               tcttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTAAGGATTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg                             <  2:3580596/140‑1 (MQ=255)
                                                                                                                 ttcAATCCGACGTAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                           <  2:2174308/140‑1 (MQ=255)
                                                                                                                 ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                           <  1:1725418/140‑1 (MQ=255)
                                                                                                                 ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                           <  1:3271419/140‑1 (MQ=255)
                                                                                                                 ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                           <  2:1225955/140‑1 (MQ=255)
                                                                                                                 ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                           <  1:59989/140‑1 (MQ=255)
                                                                                                                      tCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTGTTTTTCTTCTTCATATGAA‑CCTTTTTAGTCAGGCTTTAACGAAGCAGGCGTTTTTTGGGATTCGTCTTTGTGATTCAATTTATCAAAATAAAACTGCGCTGtt                      >  2:1080628/1‑140 (MQ=255)
                                                                                                                      tCCGACGGAGTCGTTGGCGTTCTGTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGtt                      <  1:2318278/140‑1 (MQ=255)
                                                                                                                           cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                 <  1:1948914/140‑1 (MQ=255)
                                                                                                                           cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                 <  1:808130/140‑1 (MQ=255)
                                                                                                                             gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct               <  1:1119744/140‑1 (MQ=255)
                                                                                                                             gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct               <  1:876206/140‑1 (MQ=255)
                                                                                                                             gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct               <  2:2399988/140‑1 (MQ=255)
                                                                                                                             gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct               <  1:2711597/140‑1 (MQ=255)
                                                                                                                              aGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtctc              <  1:3858943/140‑1 (MQ=255)
                                                                                                                              aGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtctc              <  2:260021/140‑1 (MQ=255)
                                                                                                                                tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg            <  2:878575/140‑1 (MQ=255)
                                                                                                                                   ttGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtat         <  2:3074492/140‑1 (MQ=255)
                                                                                                                                     ggCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa       <  2:2454890/140‑1 (MQ=255)
                                                                                                                                          tctttcttTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTATACGTATaataata  >  2:2065868/1‑139 (MQ=255)
                                                                                                                                          tctttcttTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGATGCTCTGTTTTTTTCTCCGTATAATAATc  >  2:3237766/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                           
TCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAA‑CGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATC  >  NZ_CP034943/633915‑634192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑