Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0580CG26.5% 287.8 / 29.5 174K571N (AAG→AAC) EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (39/72);  new base G (40/0);  total (102/72)
Fisher's exact test for biased strand distribution p-value = 1.36e-14
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 196 total aligned reads displayed.

CATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAT  >  NZ_CP034943/633919‑634197
                                                                                                                                           |                                                                                                                                           
cATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctttc                                                                                                                                             >  2:3347590/1‑140 (MQ=255)
    gatggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCtttt                                                                                                                                         >  2:1725418/1‑140 (MQ=255)
      tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCttttta                                                                                                                                       >  2:2263927/1‑139 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTCTTTTTGCa                                                                                                                                     >  1:2132765/1‑140 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCa                                                                                                                                     >  2:1948914/1‑140 (MQ=255)
        gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTTGGTTGTTTTTGCa                                                                                                                                     >  1:1648063/1‑140 (MQ=255)
             tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTCTTTTTCCaatatt                                                                                                                                >  2:2347879/1‑135 (MQ=255)
              aCCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttt                                                                                                                               <  2:1247328/140‑1 (MQ=255)
                  tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTTTTTTTTGATTAtttttgt                                                                                                                           >  1:3372774/1‑138 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTTCAATATTTttatt                                                                                                                          >  1:6298/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTACATTCGTTttatt                                                                                                                          >  2:3710856/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCAAGTCTTTttatt                                                                                                                          >  2:428315/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTATTTCTTTTTGCAATATTTttatt                                                                                                                          >  2:70451/1‑140 (MQ=255)
                   ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGCTTTATGTTTCGATTATTTttatt                                                                                                                          >  2:2046663/1‑140 (MQ=255)
                       tGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTGCTTTCTTTTTCCATTCATTttcttattc                                                                                                                      >  2:2995952/1‑140 (MQ=255)
                          tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTGGGTTAGTTTTGCATTCTTTTTATTGTTCata                                                                                                                   >  1:1390736/1‑140 (MQ=255)
                           cTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGGTTTTTTTTTCATTATTTTTGTTGTTGatat                                                                                                                  >  1:1631536/1‑140 (MQ=255)
                            ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg                                                                                                                 <  2:2141960/140‑1 (MQ=255)
                            ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACATTGTTTTTGTTCTGGATATg                                                                                                                 >  2:3787860/1‑140 (MQ=255)
                              gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGaa                                                                                                               >  2:808130/1‑140 (MQ=255)
                                  gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt                                                                                                           <  1:2263927/140‑1 (MQ=255)
                                   agttCCGGATCACATAGCAAGTCATAGTTATGACTAATGTGTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGttt                                                                                                          <  2:2490620/138‑1 (MQ=255)
                                   aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTGTTTTTGCCTTCTTTTTGTTTTTAATATTAAAGttt                                                                                                          >  1:744024/1‑140 (MQ=255)
                                   aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTCGTTTTGCAATCTTTTTTTTATTCATATTAAAGttt                                                                                                          >  1:2802055/1‑140 (MQ=255)
                                   aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGttt                                                                                                          <  2:64022/140‑1 (MQ=255)
                                   aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACATTATTTTTATTATTAATATTAAAGttt                                                                                                          >  2:871360/1‑140 (MQ=255)
                                   aTTTCCGGATAACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTATTCAATCCGACGGAGTCGTTGGCGTTCTGTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGttt                                                                                                          <  2:1778759/140‑1 (MQ=255)
                                     ttCCTGATCACATAGCAATTCATCGTTATGACTAATTTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATACGACGGAGTCGTTTGCGTTCTTTCTTTTTCCATTCTTTTTATTTTTCATAAGAAAGgtttt                                                                                                        >  2:1021883/1‑139 (MQ=255)
                                     ttCCGGATCACATAGCAATTCATGGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTGCTTTCTTTTTGAATTCTTTTTCTTCTTGATTTGAACGGTTTg                                                                                                        >  2:598022/1‑140 (MQ=255)
                                     ttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGGTTTTTTTGCATTAGTTTTTTTGTTACTATTGACGttttt                                                                                                        >  1:3112848/1‑139 (MQ=255)
                                     ttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTTGGTTGGTTTTGCATTATTTTTATTTATAATATGAACGgtttt                                                                                                        >  1:1565617/1‑139 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  2:2892708/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  1:145102/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  2:2056947/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  1:2578991/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  1:2673856/140‑1 (MQ=255)
                                        cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                     <  1:2859082/140‑1 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTGTTTCTTTTTACATTCTTTTTGTTGTTAATATTAAAGTTTTTATTAAGGCTTAACCGAAGCa                                                                                    >  2:978579/1‑140 (MQ=255)
                                                         cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTACATTGTTTTTATTATTCATATGAAAGTTTTTTGTAAGGCTTAAACGAAGCa                                                                                    >  2:760083/1‑140 (MQ=255)
                                                                  gACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGttttt                                                                           <  1:3347590/140‑1 (MQ=255)
                                                                  gACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAAGCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGttttt                                                                           <  1:1281828/140‑1 (MQ=255)
                                                                   aCTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGGTCTTTCTTTTTCAATTCTTTTTATTCTTGCTAAGAACGTTTTGATTGATGGTTAACAGAAGCATGCGttgttt                                                                          >  2:1706530/1‑140 (MQ=255)
                                                                   aCTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGtttttt                                                                          <  2:118983/140‑1 (MQ=255)
                                                                      aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCCTTATTTTTATTCTTAATATGAAAGTTTTGTGTGAGGCTTAACCGAAACAGGGGGTTTTTggg                                                                       >  2:928165/1‑140 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCCTTATTTTTGTTATTGATTTGAAAGTTTTTTGTGAGGGTTTACCGAAGGACGCGttttttgtgat                                                                     >  1:3206424/1‑135 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCCAGTCTTTTTATTCTTCATATGAACGTTTTGAGTGAGGCTTAACCGAATCAGGCGTTTTTTGGGAt                                                                     >  2:2711597/1‑140 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt                                                                     <  2:2582832/140‑1 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGTTTGGTTTTTCATTGTTTTTTTTCTTGATATTAACGGTTTTTGTGAGGGGTTAACGAAGCCGGCGGTTTTTTgggt                                                                     >  1:2417918/1‑138 (MQ=255)
                                                                        tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGGGGGGGTGGTTTGTTTTTTCCTTCTTTTTTTGTTTGATATTTACCTTTTTAGTGAGGGTTTAACGAACCAGGCCttttttgtgtt                                                                     >  1:28348/1‑135 (MQ=255)
                                                                           tttCTTCAATGCTTTGAACAGTGGCTTCAATTTCGTCAATCCGACGGATTCTTTTGCGTTCTTTCTTTTTCCATTCTTTGTCTTCTTCCTATGCACGTTTTGAGTCCGGCTTACCCGAAGCAGGCGTTTTTTCGGATTcc                                                                  <  2:139786/140‑1 (MQ=255)
                                                                            ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCCCTTATTTTTCGTCTTCATAAGAACGATTTGAGTCAGGCATAAACGACGCAGGCGTTTTTTGTGGTTCct                                                                 >  2:2082504/1‑140 (MQ=255)
                                                                            ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTGTTTGTTTTTGCATTCTTTTTGTTCTTCATATGTAACTTTTTAGTCAGGGGTAAACCAAACAAGCGTTTTTTAGGATTAct                                                                 >  1:3701428/1‑140 (MQ=255)
                                                                                  acaggTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCt                                                           <  1:579347/137‑1 (MQ=255)
                                                                                     ggTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGAt                                                        <  1:3725641/140‑1 (MQ=255)
                                                                                         tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGCATTGTTTTTGTTCTTAATATTTACGTTTTTAGTGAGGCTTAACCGAAGCAGGCGTTTTTTGGGATTGCTGTTTGtgattgat                                                    >  1:3075643/1‑140 (MQ=255)
                                                                                         tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTCCATTATTTTTATTGTTAATATGAACGTTTTTATTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTACTCTTTCTGagtgat                                                    >  2:1644124/1‑135 (MQ=255)
                                                                                              tgTGGCTTCAATTTCTTCACTCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                               <  2:2420333/139‑1 (MQ=255)
                                                                                              aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAATCAGGCGTTTTTTTGTATTACTATTGCTGATTCAttttat                                               <  2:500942/140‑3 (MQ=255)
                                                                                               gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc                                              <  2:174718/140‑1 (MQ=255)
                                                                                               gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc                                              <  2:1631536/140‑1 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTGTTTTTCTTCTTCATATGAACGTTTTGTGTGAGGCTTAAACGAAGCAGGGGTTTTTTAGGATTGCTCTTTGTGATTAAttttttgc                                             >  2:1162746/1‑136 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTCCATTGTTTTTCTTCTTCATAAGAACGTTTTGATTCAGGCTTAAACGAACCAGGCGTTTTTTAGGATTACTCTTTCGGATTGAttttatgc                                             >  2:1572271/1‑136 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTGTTTTTCTTCTTCATATGAAAGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGCTTCCTCTTGCTGATTCAttttatac                                             >  2:2705271/1‑136 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTCCAATCTTTTTCTTAGTCATATGTACGTTTTTAGTCAGGCTTAACCGAAACAGGCGTTTTTTCTGAATACTAGTGGTTATTCAttttatac                                             >  2:1878495/1‑136 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTATTTTTGCATTCTTTTTCTTCTTCCTTGGAACGGTTTGATTGAGGGTTAAACGAAGCACGCGTTTTTTGGGATTGCTGTTTCTGATTAATTTTCTcc                                             >  2:396477/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTGCCTTCTTTTTGTTGTTCATATGAACGTTTTTTGTCCGGCTTAACCGAACCAGGCGTTTTTTCGGAGTCCGCTTGGGGATTCATTTTATcc                                             >  2:1560533/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTGCATTCTTTTTGTTGTTCATATTAACGGTTTTAGTGAGGCTTAAACGAAGCATGCGTTTTTTAGGATTCCTCTTGCTGATTCATTTTGTcc                                             >  2:725196/1‑140 (MQ=255)
                                                                                                tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTTTTTTCATTATTTTTATTTTTCATATGAAAGGTTTGTGTGAGGGTTAACCCAAGCAGGCGTTTTTTGGGTTTGCTCTTGCTGATTAAttttatac                                             >  1:3790716/1‑136 (MQ=255)
                                                                                                     tCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTGTTTTTACCTTCGTTTTGTTGTTCAAATGAAAGTGTTTTTTGAGGGTTAAACGAAGCAGGCGTTTTTTTGGATTAGTCTTTCGGATTAATTTTTTACaaata                                        >  1:858617/1‑137 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  1:1784909/140‑1 (MQ=255)
                                                                                                        aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  1:2038698/140‑1 (MQ=255)
                                                                                                             ttcAATCCGACGTAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  2:2174308/140‑1 (MQ=255)
                                                                                                             ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  2:3586762/140‑1 (MQ=255)
                                                                                                             ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  1:1725418/140‑1 (MQ=255)
                                                                                                             gtcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  1:2760587/139‑1 (MQ=255)
                                                                                                                  tCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTGTTTTTCTTCTTCATATGAACCTTTTTAGTCAGGCTTTAACGAAGCAGGCGTTTTTTGGGATTCGTCTTTGTGATTCAATTTATCAAAATAAAACTGCGCTGtt                           >  2:1080628/1‑140 (MQ=255)
                                                                                                                  tCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGtt                           <  1:1214181/140‑1 (MQ=255)
                                                                                                                  tCCGACGGAGTCGTTGGCGTTCTGTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGtt                           <  1:2318278/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  1:1948914/140‑1 (MQ=255)
                                                                                                                       cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTAATTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTATGttttttt                      <  2:2628693/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  2:2399988/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  1:876206/140‑1 (MQ=255)
                                                                                                                         gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  1:1119744/140‑1 (MQ=255)
                                                                                                                          aGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtctc                   <  1:3858943/140‑1 (MQ=255)
                                                                                                                            tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg                 <  2:2417918/140‑1 (MQ=255)
                                                                                                                            tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg                 <  2:878575/140‑1 (MQ=255)
                                                                                                                            tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg                 <  2:1817296/140‑1 (MQ=255)
                                                                                                                            tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCGTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg                 <  2:3453201/140‑1 (MQ=255)
                                                                                                                            tCGTTGGAGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg                 <  1:2606292/140‑1 (MQ=255)
                                                                                                                               ttGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtat              <  2:3074492/140‑1 (MQ=255)
                                                                                                                               ttGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtat              <  2:1974295/140‑1 (MQ=255)
                                                                                                                                    gTTATTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGGTTATTCATTTTCTCCAATTCAAGCGTCTGTGTTTTTTTCTCCGTAtaataa         >  2:2317366/1‑140 (MQ=255)
                                                                                                                                      tctttcttTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATc       >  2:253697/1‑140 (MQ=255)
                                                                                                                                      tctttcttTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGATGCTCTGTTTTTTTCTCCGTATAATAATc       >  2:3237766/1‑140 (MQ=255)
                                                                                                                                         ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa    <  1:1132501/140‑1 (MQ=255)
                                                                                                                                         ttctttGTCCATTCTTTTTCTTCGTCATATGCACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa    <  2:2255724/140‑1 (MQ=255)
                                                                                                                                         ttcgttGTCCATTCTTGTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa    <  1:3009164/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:3112848/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:2100027/140‑1 (MQ=255)
                                                                                                                                           ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTGAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTAGAATAATCGTAAt  <  1:725196/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                           
CATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAT  >  NZ_CP034943/633919‑634197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑