New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	183537 =	190 (1.010)	3 (0.020)	3/270	10.2	1.4%	coding (1488/1590 nt)	EO946_RS01055	AraC family transcriptional regulator
	?	NZ_CP034943	= 530405	221 (1.180)					coding (415/981 nt)	EO946_RS02770	aldo/keto reductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTCTATTTAAAGAGCCTGAAACCCTTGCTTATTACCAGCAATTGCAACAGACAGAGGCGTGGCAAAACCTAAGTGCGGTACGAAATAACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/183629‑183537 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGATCTTTCATTACACCAGCGACTTCTTCGATGGGCACTTTCGGATCTACTCGGTGCTGGTAATAGAGATCAATTCGGTCCGTTTTAAGGCGCTTAAGTGAGTCCTCAACTACTTTCTTGATGTGTTCTGGT  <  NZ_CP034943/530405‑530272                                                                                                                                                                                                                                     TTTCTATTTAAAGAGCCTGAAACCCTTGCTTATTACCAGCAATTGCAACAGACAGAGGCGTGGCAAAACCTAAGTGCGGTACGAAATAACCGTTGAGATCTTTCATTACACCAGCGACTTCTTCGATGGGCACTTTCGGA                                                                                         >  1:1805153/1‑140  TTCTATTTAAAGAGCCTGAAACCCTTGCTTATTACCAGCAATTGCAACAGACAGAGGCGTGGCAAAACCTAAGTGCGGTACGAAATAACCGTTGAGATCTTTCATTACACCAGCGACTTCTTCGATGGGCACTTTCGGAT                                                                                        <  2:1805153/140‑1                                                                                        cctCGTTGAGATCTTTCATTACACCAGCGACTTCTTCGATGGGCACTTTCGGATCTACTCGGTGCTGGTAATAGAGATCAATTCGGTCCGTTTTAAGGCGCTTAAGTGAGTCCTCAACTACTTTCTTGATGTGTTCTGGT  <  1:1881700/137‑1                                                                                                                                                                                                                                     TTTCTATTTAAAGAGCCTGAAACCCTTGCTTATTACCAGCAATTGCAACAGACAGAGGCGTGGCAAAACCTAAGTGCGGTACGAAATAACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/183629‑183537 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGATCTTTCATTACACCAGCGACTTCTTCGATGGGCACTTTCGGATCTACTCGGTGCTGGTAATAGAGATCAATTCGGTCCGTTTTAAGGCGCTTAAGTGAGTCCTCAACTACTTTCTTGATGTGTTCTGGT  <  NZ_CP034943/530405‑530272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.