New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 607256245 (1.310)4 (0.020) 3/264 10.1 1.7% coding (99/1125 nt) EO946_RS03185 collagen‑like protein
?NZ_CP034943 607428 = 210 (1.140)coding (271/1125 nt) EO946_RS03185 collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 250 total aligned reads displayed.

AAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGG  >  NZ_CP034943/607117‑607392
                                                                                                                                           |                                                                                                                                        
aaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagccgga                                                                                                                                          <  2:2839546/140‑1 (MQ=255)
     ccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCGggaccagccggaccagc                                                                                                                                     >  2:658806/1‑140 (MQ=255)
     ccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCGACTGGGGAAGCTggaccagccggagcagc                                                                                                                                     >  1:1228602/1‑140 (MQ=255)
     ccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACCGGAGCTACCGGGGAAGCCggaccagccggagcgac                                                                                                                                     >  1:189528/1‑135 (MQ=25)
     ccacaaggaccacaacgaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACAGGAGCCACTGGGGCTAGAGGGGAAGCAggagcaggcggcccacc                                                                                                                                     >  1:636838/1‑138 (MQ=21)
          aggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCGGGACCAGCCGGACCACCCGGAg                                                                                                                                >  1:776141/1‑140 (MQ=255)
             accacaaggaccacaaggaccacaagggcTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACCGGAGCCACGGGAGCGACGGGGGAAGCAGGAGAAGCCGGACCAGCCGGACCGa                                                                                                                             >  1:1425636/1‑140 (MQ=25)
             accacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGTGCGACAGGAGCCACTGGAGCTACAGGGGAAGCTGGACCAGCCGCACCAGCCGGAGCgc                                                                                                                             >  1:1603631/1‑139 (MQ=255)
              ccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCGACCGGAGCTACTGCGGAAGCTGTACCAGCCGGACAACCCGCAGCGAc                                                                                                                            >  1:2321429/1‑140 (MQ=25)
               cacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACg                                                                                                                           <  2:1418860/140‑1 (MQ=255)
               cacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCAACAGGAGCGACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACg                                                                                                                           <  2:2624011/140‑1 (MQ=255)
                acaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACgg                                                                                                                          >  1:1416925/1‑140 (MQ=255)
                acaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACgg                                                                                                                          >  1:1963096/1‑140 (MQ=255)
                 caaggaccacacggaccccaaggacATCCGGGAGTCATGGGAGCAACAGGAGCTACCGGTGAAGCCGGACCAGCCGGGGCGCCAGGAGCAACGGGAGCTACTGGGGAAGCTGGTCAAGCGGGACCACCCGGAGCGACggg                                                                                                                         <  2:174104/140‑1 (MQ=25)
                 caaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACggg                                                                                                                         <  2:1873167/140‑1 (MQ=255)
                      accacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACCGGAGCTACTGGGGACGCAGGACCAGCCGGAGCGGCCGGAGCTCCGGGAGCCa                                                                                                                    >  1:983321/1‑140 (MQ=21)
                       ccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCAc                                                                                                                   >  2:2426804/1‑140 (MQ=255)
                       ccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCAc                                                                                                                   >  1:1486022/1‑140 (MQ=255)
                       ccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCAc                                                                                                                   >  2:841731/1‑140 (MQ=255)
                       ccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCAc                                                                                                                   >  1:2295064/1‑140 (MQ=255)
                        cacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCCCGGGAGCGACTTGGGAAGCGGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACg                                                                                                                  >  1:2870131/1‑140 (MQ=255)
                        cacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACCGGAGCGCCGGGCCAAGCCGGACCGGCCGGAGCCCCCGGAGCGCCGGGAGCcgcg                                                                                                                  >  1:107035/1‑140 (MQ=21)
                         acaaggaccaccaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACgg                                                                                                                 <  2:1277767/140‑1 (MQ=255)
                         acaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACgg                                                                                                                 >  1:2068913/1‑140 (MQ=255)
                          caaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACggg                                                                                                                <  1:2498985/140‑1 (MQ=255)
                              gaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCt                                                                                                            <  2:2027490/140‑1 (MQ=255)
                                  acaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCg                                                                                                        >  1:2635300/1‑140 (MQ=255)
                                  aaaatgacTGCCGGGATTCATTTGATACACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGCAGCTACCGGGGAAGCAGGACCAGCCGGACCAGCCGGAGCGACCGCACCCACGTGCGCTAcag                                                                                                        >  2:1905303/6‑138 (MQ=18)
                                   ccaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCgg                                                                                                       <  2:1401540/138‑1 (MQ=255)
                                        acTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAg                                                                                                  <  1:687601/140‑1 (MQ=255)
                                         cTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCATCCGGTGCGACAGGAGCCACGGGAGCTACTGGGGAAGCGGGACCAGCCGGACCAGCCGGAGCGACGGGAGCACCCGGACCTACCGGAGAAGc                                                                                                 >  1:2113805/1‑140 (MQ=21)
                                         cTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTCCCGGGGAAGc                                                                                                 >  2:1072724/1‑140 (MQ=255)
                                         cTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACGGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGc                                                                                                 >  1:1020488/1‑140 (MQ=255)
                                            ccGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACGGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCGACGGGCGCTACCGGGGAAGCTgg                                                                                              >  1:200912/1‑140 (MQ=255)
                                              gggAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGAc                                                                                            >  2:1247094/1‑140 (MQ=255)
                                              gggAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGAc                                                                                            <  2:821070/140‑1 (MQ=255)
                                              gggAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGAc                                                                                            <  1:547296/140‑1 (MQ=255)
                                              gggAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGAc                                                                                            <  2:329935/140‑1 (MQ=255)
                                                 aGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACAGGAGCCACGGGAGCTACGGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCAGGGGAGCTCCCGGGGCCGCTGGACCAg                                                                                         >  2:2815651/1‑140 (MQ=25)
                                                   tCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGcc                                                                                       <  1:2495051/140‑1 (MQ=255)
                                                   tCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGcc                                                                                       <  1:2472043/140‑1 (MQ=255)
                                                    cATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACAGGAGCCACCGGAGCTACTGGGGACGCGGGACCAGCCGCCCCAGCAGGAGCGCCCGGAGCCACGGGCGCTCCCGGGGCCGCGGGgccggccg                                                                                      >  2:2256356/1‑140 (MQ=18)
                                                      tGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGa                                                                                    >  2:2227395/1‑140 (MQ=255)
                                                      tGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCGACCGGGGCAGCAGGACCAGCCggc                                                                                    >  2:1710862/1‑139 (MQ=255)
                                                           gCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGCGCTGCGGGGGAACCAGGACCACCCGGACCCGCCGGAGCTGCCGGAGCCACCGGAGCTCCCGGGGCAGCAGGACCAGCCGGAGCggc                                                                               >  1:1566110/1‑138 (MQ=18)
                                                            ccACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACg                                                                              <  1:1941555/140‑1 (MQ=255)
                                                            ccACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACg                                                                              <  1:2756340/140‑1 (MQ=255)
                                                             cacaGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACgg                                                                             >  1:2602752/1‑140 (MQ=255)
                                                             cacaGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACgg                                                                             >  1:2205330/1‑140 (MQ=255)
                                                              acaGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACggg                                                                            <  2:1377585/140‑1 (MQ=255)
                                                              acaGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACggg                                                                            <  2:1114319/140‑1 (MQ=255)
                                                              acaGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACggg                                                                            <  2:2093244/140‑1 (MQ=255)
                                                              acaGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACggg                                                                            <  2:2736995/140‑1 (MQ=255)
                                                              acaGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACggg                                                                            <  2:50379/140‑1 (MQ=255)
                                                                    gCTACCGGTGATGCAGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGAc                                                                      <  2:1528928/140‑1 (MQ=255)
                                                                    gCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGAc                                                                      <  1:870172/140‑1 (MQ=255)
                                                                     cTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACa                                                                     <  1:2227395/140‑1 (MQ=255)
                                                                       aCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAgg                                                                   >  1:1247396/1‑140 (MQ=255)
                                                                       aCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAgg                                                                   >  1:1278866/1‑140 (MQ=255)
                                                                       aCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAgg                                                                   <  1:2379784/140‑1 (MQ=255)
                                                                       aCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAgg                                                                   <  2:2109835/140‑1 (MQ=255)
                                                                       aCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAgg                                                                   <  2:2075693/140‑1 (MQ=255)
                                                                         cGGGGAAGCCGGACCAGCCGGGGAGACAGGAGCCCAGGGAGCCACTGGGGACGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAg                                                                 <  1:409146/140‑1 (MQ=18)
                                                                         cGGCGAAGCCGGACCATCCGGGGCGCCCGGAGCCACGCGAGCTACGGGGGAAGCTGGACCACCCGGACCATCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAg                                                                 <  2:392888/140‑1 (MQ=17)
                                                                           gggAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGGCCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCt                                                               >  1:385551/1‑140 (MQ=255)
                                                                           gggAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCt                                                               >  1:576977/1‑140 (MQ=255)
                                                                            ggAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAg                                                                 >  1:240536/1‑137 (MQ=255)
                                                                                 ccGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCggg                                                         <  1:1537253/140‑1 (MQ=255)
                                                                                          ccGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAagccgga                                                <  2:444551/140‑1 (MQ=255)
                                                                                              ggCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGTGAacccggacaag                                            >  1:2718151/1‑140 (MQ=255)
                                                                                               gCGACAGGAGCCACGGGAGCGACGGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGACGCTGGACCAGCCGGCGCGACGGGAGCGACAGGAGCTACCGGGGAagccggaccagc                                           <  1:313946/140‑1 (MQ=255)
                                                                                                   cAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAagccggaccagccgga                                       <  1:2670594/140‑1 (MQ=255)
                                                                                                   cAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCGGGACCAGCCGGAGCGACCGGAGCGACAGGAGCACCCGGGGCagccggagcagccggc                                       >  2:1462143/1‑139 (MQ=18)
                                                                                                             gggAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAg                             <  2:576977/140‑1 (MQ=255)
                                                                                                                  cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                        >  1:2283104/1‑140 (MQ=255)
                                                                                                                  cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                        >  1:300041/1‑140 (MQ=255)
                                                                                                                  cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                        >  1:415158/1‑140 (MQ=255)
                                                                                                                    aCTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACggg                      >  1:2723348/1‑140 (MQ=255)
                                                                                                                      tGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAg                    >  1:2806929/1‑140 (MQ=255)
                                                                                                                       ggggAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCCACGGGAGCGACAGGAGCTACCGGGGACGCCGGCCCAGCCGGACCAACCGGAGCGagcggggc                   >  2:1650132/1‑133 (MQ=18)
                                                                                                                        gggAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACgg                                                                                                                 <  2:1659576/45‑1 (MQ=255)
                                                                                                                         ggAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCa                 <  2:1963096/140‑1 (MQ=255)
                                                                                                                          gAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACCGGAGCGACAGGAGCTACCGGCGCACCCGGCCAAGCCGGACCACCCGGAGCGACAGGAGCCAc                >  2:511353/1‑140 (MQ=14)
                                                                                                                           aaGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGCCCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGcgccg               >  2:2382827/1‑136 (MQ=255)
                                                                                                                           aaGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGTAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGAGCAGCCGGAGCACCCggagcgacgggagcgacg               >  2:844624/1‑140 (MQ=18)
                                                                                                                           aaGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACg               >  2:1579824/1‑140 (MQ=255)
                                                                                                                            aGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCCACgggagccacgggagccaccg              >  1:1374487/1‑138 (MQ=17)
                                                                                                                             gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAg                                                                 <  1:1849520/88‑1 (MQ=255)
                                                                                                                             gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACggg             >  1:1497077/1‑140 (MQ=255)
                                                                                                                             gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacgggagcgacggg             >  2:2703863/1‑140 (MQ=255)
                                                                                                                             gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAg                                                                 >  2:1849520/1‑88 (MQ=255)
                                                                                                                             gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACagg                      >  1:751336/1‑131 (MQ=11)
                                                                                                                             gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg             <  2:2534033/140‑1 (MQ=255)
                                                                                                                             gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg             <  1:259488/140‑1 (MQ=255)
                                                                                                                             gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg             >  1:1847095/1‑140 (MQ=255)
                                                                                                                              cTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGa            <  2:2393453/140‑1 (MQ=255)
                                                                                                                               tGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACggg                      >  2:2600934/1‑129 (MQ=255)
                                                                                                                               tGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGATACCGGGGAAGCAGTACCAGCCGGAGCAACGGGAGCGACGGGAGCCACGGGac           >  1:1712619/1‑139 (MQ=18)
                                                                                                                                       ccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAgg                                                                   >  2:762177/1‑76 (MQ=255)
                                                                                                                                        cggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCgggg  >  2:2854790/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                        
AAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGG  >  NZ_CP034943/607117‑607392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.