Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943634,0580CG34.4% 158.2 / 26.7 108K571N (AAG→AAC) EO946_RS03330ABC‑F family ATP‑binding cassette domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (23/40);  new base G (33/0);  total (68/40)
Fisher's exact test for biased strand distribution p-value = 7.01e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 125 total aligned reads displayed.

TGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAT  >  NZ_CP034943/633925‑634197
                                                                                                                                     |                                                                                                                                            
tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGTTATTTCTTTTTc                                                                                                                                        >  2:1674159/1‑140 (MQ=255)
tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGtttttg                                                                                                                                        >  1:2757619/1‑139 (MQ=255)
tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCtttttg                                                                                                                                        >  2:1222865/1‑139 (MQ=255)
tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTc                                                                                                                                        >  2:167944/1‑140 (MQ=255)
       tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                     <  1:2117066/136‑1 (MQ=255)
       tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt                                                                                                                                     >  2:2117066/1‑136 (MQ=255)
            tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTATAGTGTACTTCAATTGTTTGAACAGTGGCTTAAATATCTACAATCCGACGGAGTCGTTTTGGGTTATTATTTTTCCAATATTTttct                                                                                                                            >  2:569763/1‑140 (MQ=255)
            tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTAGATTCtttttat                                                                                                                            >  1:538686/1‑138 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTACAATATTTttatt                                                                                                                           >  2:760836/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTGTTTTTACATTAATTttgtt                                                                                                                           >  2:1273477/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGGTTGTTTTTGCATTATTTttgtt                                                                                                                           >  2:824610/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTATTTttatt                                                                                                                           >  1:2199895/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTAGTTATTTTTACATTCtttttaat                                                                                                                           >  2:358221/1‑137 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTGCATTCTTTttgtt                                                                                                                           >  2:824468/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTGTTTGTTTTTACAATAtttttttt                                                                                                                           >  1:1012635/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTGGTTTGTTTTTGCATTCTTTttctt                                                                                                                           >  1:700034/1‑140 (MQ=255)
             ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACGAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCATTTTCTTCAATCCGAGGGAGTCGTGGGGGTTCTTTGTGTTTCGATTCgttttggt                                                                                                                           >  2:2177703/1‑137 (MQ=255)
                   gTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTGCATTCTTTTTATTGTTCat                                                                                                                     >  2:1611875/1‑140 (MQ=255)
                     cTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACTGAGTCGTTGGCGTTGTTTATTTTTCCATTATTTTTCTTATTAatat                                                                                                                   >  2:672484/1‑140 (MQ=255)
                       tGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTCCCATGTTTTTGTTGTTGATTTGa                                                                                                                 >  1:2200609/1‑140 (MQ=255)
                             aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTACATTATTTTTATTGTTCATATGAAAGttt                                                                                                           >  1:163410/1‑140 (MQ=255)
                                 ccGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAg                                                                                                       <  1:2811606/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCACTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                      <  1:1291866/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                      <  1:760836/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                      <  1:661270/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                      <  1:2705528/140‑1 (MQ=255)
                                  cGGATCACATAGCAATTCATCGTTATGACGAATGTTTACTACAATGGTTTGAACAGTGGCTTCAATTTCATCACTCCGACGGAGTCGTTGGCGTTCTTTCTTTGTCCATTCTATTTATTCTTCATATGAACGTTTTGAGt                                                                                                      <  1:593143/140‑1 (MQ=255)
                                  cGGAACACATAGCAATGCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGCGACGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt                                                                                                      <  2:2004060/140‑1 (MQ=255)
                                       cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTACATTCTTTTTCTTCTTAATATGAACGGTTTGAGTCAggg                                                                                                 >  2:1361852/1‑139 (MQ=255)
                                       cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGc                                                                                                 <  1:13004/140‑1 (MQ=255)
                                       cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGGGTTCTTGTTCCATTCGGTTTCTTGGTCATATGCACGTTTTGATTCAggg                                                                                                 >  2:1885371/1‑139 (MQ=255)
                                                 ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGGTTGTTTTTGCATTGTTTTTGTTGTTGAAATGAACGTTTTTTTTGAGGC‑TTAACCGaaa                                                                                      >  1:1178839/1‑139 (MQ=255)
                                                 ttCATCGTTATGACTAATGTTTTCTTCAATGGTGTGAACCGTGGCTTCAATTTCTTCAATCCGACGGTGTCGTGGGGGGGGTTTTTTTTTGCCATGGTTTGGGTGTTCATATGGACCGTTTGAGTCCGGCGTTAAccaac                                                                                       >  1:802739/1‑137 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGTTTTTTTTTGGATTGTTTTTGTTGTTGATATTAAAGTTTTTTGTGAGGC‑TTTAACGAACCa                                                                                    >  1:2459686/1‑140 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTTTATTCTTCATATGAACGGTTTGATTCAGGC‑GTAACCGAAGCa                                                                                    >  2:2269540/1‑140 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCGTTTTCCAGTCTTTTTATTCTTCATATGAAAGTTTTTAGTCAGGC‑TTAACCGAAGCa                                                                                    >  2:1386552/1‑140 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTGGATTCTTTTTGTTATTCATATGAACGTTTTGAGTCAGGC‑TTTAACGAAGcg                                                                                    >  1:1196614/1‑139 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTGTTTTTATTGTTAATATGTAAGTTTTTAGTCAGGC‑TTAAACGAAACa                                                                                    >  1:2636389/1‑140 (MQ=255)
                                                   cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGGTTGTGTTTGCAGTGTTTTTGTTGTTGATATGGACGTTTTTTGTGAGGCGTTAACCaaaca                                                                                     >  1:1716768/1‑138 (MQ=255)
                                                           tGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCAATTATTTTTGTGCTTGATAAGAAACTTTTTGGGAAGTC‑TTAACAGAAGCAGG‑Gttttt                                                                           >  2:1148464/1‑140 (MQ=255)
                                                                 aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTGTCTTTTTCCATTCGTTTTGGTCTTAGTATGAAAGTGTTGATTGAGGC‑TTAAACGAAACAGGGGTTTTTTGGGa                                                                      >  2:2023230/1‑140 (MQ=255)
                                                                 aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  2:317378/140‑1 (MQ=255)
                                                                 aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGa                                                                      <  1:4648/140‑1 (MQ=255)
                                                                  tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGGGTTTGTTTTTTCATTGTTTTTGTTGTTCATATGAAAGTTTTGTGTCAGGC‑TTAACCGAAACAGGCGttttttggtat                                                                     >  1:708888/1‑135 (MQ=255)
                                                                      ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTATTTTTGCATTCTTTTTGTTGGTGATATTAAAGTTTTTAGTCAGGC‑TTAAACGAAACCCGCGTTTTTTAGGAttgca                                                                 >  1:1980889/1‑137 (MQ=255)
                                                                       tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCCTTATTTTTGTTGTTGATATGTTAGTTTTGTGTCAGGC‑TTAACCGAAGCAGGCGGTTTTTCGGGTTGctc                                                                >  1:688242/1‑140 (MQ=255)
                                                                         ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTATTTTTCCATTATATTTGTTATTCATATGAAAGTTTTGTGTCAGGG‑TTAAACCAAGCACGCGTTTTTTAGGATTGATCtt                                                              >  2:2164514/1‑140 (MQ=255)
                                                                          tcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTg                                                             <  1:962478/140‑1 (MQ=255)
                                                                           cAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGc                                                            <  1:2347089/140‑1 (MQ=255)
                                                                            aaTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCt                                                           <  2:1878790/140‑1 (MQ=255)
                                                                                        aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct                                               <  2:2587358/140‑1 (MQ=255)
                                                                                         gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTACATTGTTTTTATTCTTCATGTTAAAGTTTTTAGTCAGTC‑TTAACCGAAGCATGGGTTTTTTTCGAGTCCTATTTCTTATTAATTTtatc                                              >  2:1672563/1‑140 (MQ=255)
                                                                                         gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc                                              <  2:806621/140‑1 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCCTTGTTTTTGTTGTTGATATTTACGTTTTTATTCAGGC‑TTAACCGAAGCAGGCGTTTTTTGGGCTTCCTCTTGGTGGTTGAttttgtac                                             >  2:210195/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTCTTTTTGCATTCTTTTTGTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAAACGAAGCAGGCGTTTTTTGGGATTGCTATTGCTGTTTAATTTtgtca                                             >  2:2618026/1‑139 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGGTTTGTTTTTCCCATGTTTTTGTTCTTCATATGAACGTTTTTAGTGAGGG‑TTAACCGAAGCCGGCGTTTTTTCGGTTTGGTCTTGGTGATTGTttttatac                                             >  2:2176274/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTACAGTGTTTTTGTTCTTCATATGAAAGTTTTGAGTCAGGG‑TTAAACGAAGCTGGGGTTTTTTCGGATTGCTGTTTCTGATTCATTTTGTcc                                             >  2:2229653/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTCCAGTCTTTTTCTTCTTCATATGAACCGTTTGAGTCAGGC‑TTAAACGAAGCAGGCGTTTTTTAGGATTCCTCTTGGTGATTAAttttatac                                             >  2:368096/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCCTTCTTTTTGGTCTTCATATGAACGTTTTTAGTCAGGC‑GTAACCGAAGCCGGCGTTTTTTGGGATTGCTCTTGCGGTGTCATTTTCTcc                                             >  2:34129/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTTCATACTTTTTCTTGTTCATATGAACGTTTTTAGTCATGC‑TTAAACGAAGCAGGCGTTTTTTCGGATTCATGGTGGTGATTAATTTTATcc                                             >  2:1974879/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTGCATTCATTTTGTTATTCATATTTACGGTTTGAGTCAGGC‑TTAAACCCAGCCGGCGTTTTTTTGGATTACTCGTTCTCATTCAttttatga                                             >  2:443517/1‑136 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGG‑TTAACCGAACAAGGCGTTTTTTGGGATTACTCTTTGAGATTAATTTTATcc                                             >  2:1046008/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTACCTTCTTTTTAGTCTTCAAAAGGACCTTTTGAGGAACGC‑ATAACCGCACCAGGCGTTTTTTCCGATTCCTCGTGCTGTTTGATTTTCTcc                                             >  2:643413/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTCTTTTTGCCATCTTTTTCTTGTTCATATGAACGTTTTTAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTcc                                             >  2:1310781/1‑140 (MQ=255)
                                                                                          tGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGCGGTCTTTCTTTTTCCATTCTTTTTCTTCTTGATATGAACGTTTTTATTCAGGC‑GTTACCGAAGCAGGCGTTTTTTAGGATTCCTCTTGGTTATTCAttttatgc                                             >  2:1727150/1‑136 (MQ=255)
                                                                                                cAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCa                                       <  2:2758143/140‑1 (MQ=255)
                                                                                                  aTTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCATTGTTTTTCTTCTTGAAATGAACGTTTTTTGTCAGGC‑TTTAACGAAGCCGGCGTTTTTTGTGTTTGCGCTTTGTGTTTGTTTTTGTCCAATTAAAg                                     >  2:1259476/1‑140 (MQ=255)
                                                                                                  aTTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg                                     <  2:538686/140‑1 (MQ=255)
                                                                                                     tcttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg                                  <  1:167944/140‑1 (MQ=255)
                                                                                                     tccacAACCCGACGCCGTCGGTGGCGGACTGTCTTTTGCCCTGCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg                                  <  1:2392500/136‑1 (MQ=255)
                                                                                                       ttcAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCCATTCTTTTTATTCTTCATATTAACGTTTTTGGTCAGGC‑TTAAACGAAGCAGGCGTTGTTTGGGATTCGTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                >  2:1581565/1‑140 (MQ=255)
                                                                                                       ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  1:1277970/140‑1 (MQ=255)
                                                                                                       ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  1:258424/140‑1 (MQ=255)
                                                                                                       ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  2:152034/140‑1 (MQ=255)
                                                                                                       ttcAATCCGACGGAGTCGTTGGCGTTCTTTCATTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct                                <  2:1985525/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  2:2480549/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGAGTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt                      <  1:2269540/140‑1 (MQ=255)
                                                                                                                 cGGAGTCGTGGGCGTTCTTTCTTGTTCCATTCTTTTTCGTCTTCATATGCACGTTTTGACTCAGGC‑TTAACCGAAGCAGGCGTTTTTGCGGATGCCTCTTGCTGATTCATTTTCTACAATTCAAGCTGCTCTGtttttgt                      <  1:1885371/140‑3 (MQ=255)
                                                                                                                   gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  1:2092006/140‑1 (MQ=255)
                                                                                                                   gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  1:210195/140‑1 (MQ=255)
                                                                                                                   gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct                    <  2:1159740/140‑1 (MQ=255)
                                                                                                                   gAGTCGTTGGCGTTCTTTCTTTTTACATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGAGTTTTTTAGTATTCCTCTTGCTGATTAATTTTCTCCAATTCAAGATGATCTtttttttttt                    <  1:1273477/140‑3 (MQ=255)
                                                                                                                          tGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtata             <  2:2521414/140‑1 (MQ=255)
                                                                                                                          tGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtata             <  2:2655306/140‑1 (MQ=255)
                                                                                                                           ggCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa            <  1:1674159/140‑1 (MQ=255)
                                                                                                                           ggCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTataa            <  1:1222865/140‑1 (MQ=255)
                                                                                                                               ttctttctTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATaataat        <  1:2241661/140‑1 (MQ=255)
                                                                                                                               ttctttctTTGTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATaataat        <  1:1817394/140‑1 (MQ=255)
                                                                                                                                gctttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATc       >  2:2074620/2‑140 (MQ=255)
                                                                                                                                   ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa    <  1:2177703/140‑1 (MQ=255)
                                                                                                                                   ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa    <  2:2512464/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:2126049/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  1:2077870/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:1514276/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:442939/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  1:1880914/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:2636389/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:2034358/140‑1 (MQ=255)
                                                                                                                                     ctttTTCCAGTCTTTTTCTTCTTCCTATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:338274/140‑1 (MQ=255)
                                                                                                                                     ctttTTACATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt  <  2:2341291/140‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                            
TGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGC‑TTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAT  >  NZ_CP034943/633925‑634197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑