Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP034943 | 1,366,109 | 0 | G | T | 31.4% | 145.6 / 12.1 | 108 | D203Y (GAT→TAT) | EO946_RS07135 | PepSY domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base G (38/32); new base T (0/32); total (38/70) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.70e-09 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 111 total aligned reads displayed.
CAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATA > NZ_CP034943/1365974‑1366246 | caacaaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATaa > 2:1433867/1‑140 (MQ=255) caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGACGTGGATGTTGATCTTCCGGATGATAaaga > 1:1415081/1‑140 (MQ=255) caaAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAaaga > 1:1845202/1‑140 (MQ=255) ccGATTACGAAAAAAGAACCCAAAACCATTGGTGCGCGAGAAAGGGGGGGTACTGCGGATGACGAAGATCTCGAAAATTGTGAGGGCACTCTCTTTTTTTATGTGGTTGTTGATGTTCGGGATGATAAAGAAGCGACtgt < 2:13877/140‑1 (MQ=255) cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg > 1:2871022/1‑140 (MQ=255) cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg > 1:1820163/1‑140 (MQ=255) cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg > 1:1545230/1‑140 (MQ=255) cGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACtgtg > 2:2078463/1‑140 (MQ=255) ctaaaaaaCAAGCAAAAACCATTGCTGAGCTAGAAACGGGGGGGACCGCGGATGACGCAGATCTATAAAAAAGTGAGGGAACTCTAATCTTTGATGTGTATGTTGATCTTCGGGATTATAACGAAGCGACTGTGAAAAtt < 2:345501/138‑1 (MQ=255) cGAAAAAAGACCCCAACCCCATTGCTGCGCGAGAACCGGGCGGGACAGGGTATGACGCTGATCTCGAAAAATGTGAGGCCAGTGTCTTCTTTGAAGTGGATGTTGATCTTCCGGATGATAAATACGCGACTGTGAAAAtt < 2:1766885/140‑1 (MQ=255) aaaaaCAACCAAAAACCATGGGTGAGCGAGAAACGGGCGGGACAGCGGATGACGCATATCTCTAAAAATGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAAt < 2:2383157/140‑1 (MQ=255) aaaTAACCCAAACCCTTTGCTGAGCGAGAAACGGGCGGGACGGCGTATGACGCAGTTCTCGAAAAAAGTGAGGGCACTCTCATGTTTTAAGTGGTTTTTTATATTCCTGATTATAAAGAAGCGACTGTGAAAATTAATGc < 2:1985593/140‑1 (MQ=255) taccccAAAACCATTGCTGAGCGAGAAACGGGCGGTACAGCGTATGACGCATATCTCTAAAAAAGTGAGGCAACTATAATCTTTTAAGTGTTTGTTTATCTTCGGTTTTATAAAGAAGCGACTGTGAAAATTAATGCCTa < 2:1928558/136‑1 (MQ=255) taagCAAAAACCTGTGCTGAGCTATAAACGGGCGGTACAGCGTATCACGCAGATCTCGAAAAAAGTTAGGGCACTCTCATATTTGAAGTGTTTGTGGCTCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTa < 2:1293143/139‑1 (MQ=255) gaagCAAAAACCTTTGCTCAGCGAGAAACGGGCGGCACAGCGGATGACCCAGATCTCCAAAAATGTTAGGGCAATCACATTTTTGAAGTGGTTGTTGATTTTCCGGATTATAACGACGCGACTGTGAAAATTAATGCCTa < 2:371571/140‑1 (MQ=255) caacccAAAACCATTCGTCTGCTTGAACGGGGGGGCACAGCGTATGAGGAATATCTATAAAAAAGTGAGGGAATTCTATTCTTTTATGTGTTTTTTGATGTTCCGTATTATAAACAAGCGACTGTGAAAATTAATGCCTa < 1:2787170/136‑1 (MQ=255) aaaccaaaaaCCATTGCTGCGCTATAAAGGGGGGGCACCGGTGATTACGAATATATCTAAAAAATTTAGGGCAATCTCTTTTTTTATGTGGTTTTTTATATTCCGTATTATAAACACGCGACTGTGAAAATTAATGCCTa < 1:578993/134‑1 (MQ=255) aagCCAAACCCAGTGCTGCGCGAGAACCGGGCGGGACCGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGTTGTTTATCTCCCGGTTGATAAAGAAGCGACTGTGAAAATTAATGCCTac < 2:681410/140‑1 (MQ=255) caccctggCTGCGCGATACAGGGGCGGGACGGCGGATGACGAAGATCTCTAAAAATGTGAGGGCACAATATTTTTTTATGTGTTTTTTGATTTTCGGTATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGaa < 1:710639/133‑1 (MQ=255) atcctttGCTTAGCGAGAATCGGGGGTTACTGCGGTTGACTCATATCTAGAAAAATGTGTGGCCATTAAAATTTTTTAAGTGTTTTTTGTTGTTCCGTATTTTAAAGAAGCGACTGTGAAAATTAATGGCTACACCGGaa < 2:1006324/135‑1 (MQ=255) aacccgtgctgcGCGAGAACGGGGGGGTACAGCGGATTCCGCAGATCTCAAAAAATGTGAGGGCACATTCATCTTTGACGTGGATGTTGATCTTCCGTATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGaa < 2:57249/134‑1 (MQ=255) cctttGCTGAGCGAGAACCGGGCGGGACCGGGGATGACCAAGATCTCCAAAAAATTGAGGGAACTATAATATTTTAATTGGTTGTTGATCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAg < 2:808891/137‑1 (MQ=255) tGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTg > 1:2700322/1‑140 (MQ=255) gtGAGCCAGAACGGGGCGGGACAGCGGATGACGCATATCTCTAAAAAAGTGAGGGAACTCTCATCTTTTATGTGGATGTTGATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:1600485/139‑1 (MQ=255) cttaGCGAGACACGGCCGGGACAGCGGATCACGCATATCACCAAAAAAGTGAGGGAACTATCATGTTTTAAGTGGATTTTGATCTTCCGCATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:1064549/137‑1 (MQ=255) cTGTGCGAGAAACGGGCGGCACCGCGGATGACGCAGATCTCGAAAAAAGTGAGGCCACTCTAATCTTTCATTTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:2700322/140‑1 (MQ=255) cTGAGCTAGAAAGGGGGGGCACAGGGTATGACGCAGATCTCTAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGTATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:2467486/140‑1 (MQ=255) cTGAGCGAGAAACGGGCGGGACCGCGGATGACGCAGATCTCCAAAAATGTGAGGGCACTCTCATATTTGAAGTGGATGTTTTTCTTCCGGATGATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 1:1433867/140‑1 (MQ=255) cTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa > 2:1426123/1‑140 (MQ=255) cTGAGAGATAAACGGGGGGCACAGCGTATGCCGCAGATCTCTAAAAAAGTGAGGGCACTCTCATTTTTTAAGTGTATGTTGATATTCCGGATTATAACGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCa < 2:2467523/140‑1 (MQ=255) aGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAAc > 2:1228575/1‑140 (MQ=255) ggccgaACCGGGCGGCACCGCGGATGCCTCAGAGCTCGAAAAAAGTGAGGCCACCCCCATCTTTCATGGGGCTGTTGCTCTTCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:1127571/136‑1 (MQ=255) gctagaAACGGGCGCGACAGCGTATGACGCAGATATCCAAAAAAGTGAGGTCACTCTCATTTTTTATGTGTATGTTGATCTTCCGGTTTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:2571422/137‑1 (MQ=255) gctacaaaCGGGCGGGACAGCGTATGACGCAGATCTCTAAAAAAGTGAGGGCACTCTCATCTTTGACGTGTATGTTGATCTTCCGTATTATAAAGAAGCGACTGCGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:1661509/135‑1 (MQ=255) gccacaaaCGGGCGGTACCGCGGATGACGCAGATCTCGAAAAAAGTGAGGGAACTCACATCTTTGAAGTGGTTGTTGATCTTCCGCATGATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:1828559/135‑1 (MQ=255) gccacaaaCGGGCGGGACAGCGGATCACGCAGATCGCGAAAAAAGTGTGGGCCCTCACATCTTTGAATTGGATGTTTATGTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:1942849/135‑1 (MQ=255) gCGATAAACGGGGGGGACAGCGTATGACGCAGATCTCCAAAAAAGTGTGGGCACTCTCATATTTTAAGTGTATGTGTATCTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:1759203/140‑1 (MQ=255) gCGACAACCGGGCGGGCCCGCGGATGCCCCAGATCTCCAAAAACGTGCGGGCACTCTCATATTTGAAGTGGTTTTTGATCTGCCGTATCATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACa < 2:2491/140‑1 (MQ=255) gCGACAACCGGCCGGGACAGCGGAGCACCCATATCGCTAAAAACGTGAGGGCACTCTCATCTTTCACGTGGATTTGTATCTTCCGGATGATAAACACGCGACTGTGAAAATTAAGGCCTACACCGGAAAGGTTGCAAACa < 1:1539126/140‑1 (MQ=255) ccacaaccgggcgggACCGCGTAGGACCAAGATCTCCAAAAAAGGGAGGCCACTATCATCTTTTAAGTGGTTTTTTATCTTCCGTATCATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAt < 1:1736044/133‑1 (MQ=255) cGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGACAGGTTGCAAACAt > 1:2431821/1‑140 (MQ=255) gataacggggcgggACCGCGGATGACGCAGATCCCCAAAAATGTGAGCCCACTCAAATCTTTTAAGTGTATGTTGATCTACCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAtt < 1:2078463/133‑1 (MQ=255) ccacccgggcgggACCGCGGATGACCCACAGCCCTAAAAAAGTGAGCGCACTCAAATCTTTCATGTGTTTGTTGATCTCCCGGATGATAACCACGCGACTGTGAAAATGAATGCCTACACCGGAAAGGTTGCAAACATtg < 1:1993380/135‑1 (MQ=255) ataaccgggcgggACAGGGGATGACGCAGAGCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGAGGAAAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACAGtg < 2:1415081/135‑1 (MQ=255) acaacggggcgggACAGCGTATTCCCACGATCTCCAAAAAATTGTGGCCACTAAAATCTTTTATGTGGTTGTTTATGTTCCGGATGATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtg < 1:445323/134‑1 (MQ=255) gaAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATtgt > 2:759323/1‑140 (MQ=255) ggggcggcACCGCGGATGACGCATCTCACTAAAAATGTGAGGCAACTCTAATCTTTGACGTGGATGTTTATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTAt < 1:2695126/139‑1 (MQ=255) ggggggACCGGGTATGCCGAATATCTCTAAAAATTTGAGGCAACTCTAATTTTTGATGTGGTTTTTGATCTTCCGGTTGATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa < 1:5888/137‑1 (MQ=255) ggggggACAGCGGATGACGCATACCACCAAAAATGTGAGGGAACTCTCATTTTTGACGTGTTTTTTGATCTCCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa < 1:1369965/137‑1 (MQ=255) ggcggtACAGGGTATGACGCATATCTCTAAAAAAGTGCGGCCACTCTAATGTTTGATGTGGTTTTTTATCTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa < 1:1846900/140‑1 (MQ=255) ggcgggACCGGGTATGCCGAACACCCCCAAAAAAGTGAGGCCACTCTCATGTTTGAAGGGTATTTTTATCTTCCGGATTATAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa < 1:2444378/140‑1 (MQ=255) ggcggcACCGGGGAGCACGCAGATCTCAAAAAATGGTAGGGCACCCTCATGTTTGACGTGGTTGTTGATCTTCCGGATGAAAACGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa < 1:160167/140‑1 (MQ=255) ggcggcACCGCGTATGACCCAGAAATATAAAAAAGTGAGGGCACTCTATTCTTTTAAGTGTCTTTTTATCTTCCGGATTATAAAGCAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGa < 1:1696698/140‑1 (MQ=255) cGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACgg > 1:1427308/1‑140 (MQ=255) ccgaactcGAAAAAAGTGACGGCACTATCATCTTTGACGTGGATGTTCATCTTCCGCATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatc < 2:601464/135‑1 (MQ=255) cataTCTCGAAAAATGTGAGGGCCATCTCATCTTTTAAGTGTATGTTGATCTTCCGTATTAAAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatc < 2:128780/137‑1 (MQ=255) cacaTCTCAAAAAAAGTCAGGCCACTCTAATCTTTTAAGGGTTTTTTGATCTTCCGGATCAAAACCACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatc < 1:1878199/137‑1 (MQ=255) cAGATCTCCAAAAAAGTGAGGGCACTCTAATCTTTGATGGGGTTTTTGATCTTCCGGATTATAAACACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatc < 1:2447033/140‑1 (MQ=255) cAGATCTCCAAAAAAGTGAGGGAACTCTAATCTTTGAAGTGGATTTTGATCGTCCGGATGATAACGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatc < 2:1149395/140‑1 (MQ=255) aaGATCGCGAAAAAAGTGAGGGCACACCAATCTTTGACGTGGAGTTTGACCGTCGGTATCATAACGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatc < 2:601548/139‑1 (MQ=255) aGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatca > 2:1704789/1‑140 (MQ=255) aGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCtcatca > 2:2231197/1‑140 (MQ=255) aTCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCaaa > 2:2088341/1‑140 (MQ=255) tctcGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCATACATTGTGTATGAGGACTGACGGGTTCTCATCAAAt > 1:2069646/1‑140 (MQ=255) cGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCTGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtct < 2:2108614/140‑1 (MQ=255) gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtctc > 1:1991520/1‑140 (MQ=255) gAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATtctc > 1:1823538/1‑140 (MQ=255) aGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTtctct > 1:149051/1‑140 (MQ=255) aGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTtctct > 1:552851/1‑140 (MQ=255) aGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTtctct > 1:1340328/1‑140 (MQ=255) cACTCTCATATTTGACGTGGTTTTTGATCTTCGGGATTATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGtt < 1:865540/140‑1 (MQ=255) acactcATCTTTGAAGTGTATGTTGATGTTCCGGATTAAAAATAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGttt < 1:1016227/137‑1 (MQ=255) aCTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGttt > 1:1157903/1‑140 (MQ=255) tctcATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTc > 2:2129607/1‑140 (MQ=255) tcATTTTTTAAGTGTTTGTTGATCTTCGGTTTTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCt < 2:2124252/140‑1 (MQ=255) tGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTAGTTTTCCTTTCATGt > 1:2179795/1‑140 (MQ=255) gAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGtt > 1:1652492/1‑140 (MQ=255) ttgtttctGTTTATCTTCGGGTTTAAAAATACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTg < 1:2398152/133‑1 (MQ=255) tgtgtttGTTGATCTTCCGGATTATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa < 2:790455/134‑1 (MQ=255) tgTGGTTGTTGATCTTCGCTATTATAACGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa < 1:651320/139‑1 (MQ=255) aGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGa > 1:435721/1‑140 (MQ=255) gTGGTTGTTGATCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg < 1:2813744/140‑1 (MQ=255) gTGGATGTTGATCTACCGGTGGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAg < 2:2069646/140‑1 (MQ=255) tGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgt > 1:1107010/1‑140 (MQ=255) tctGTTGATCTTCCGGATGATAAAGACGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt < 2:1652492/138‑1 (MQ=255) taTGTTGATCTTCCGGATTAAAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt < 1:52/139‑1 (MQ=255) gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTa > 1:2270404/1‑77 (MQ=255) gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt > 1:1333031/1‑140 (MQ=255) gATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAgtgt > 2:1294167/1‑140 (MQ=255) gATGTTGATCTTCCGGATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTa < 2:2270404/77‑1 (MQ=255) tGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTaaa > 1:1277599/1‑140 (MQ=255) tatgttCCGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAAc < 2:1545230/136‑1 (MQ=255) gatataccGGATTATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAAc < 2:2871022/134‑1 (MQ=255) gATCTTCCGTATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGCTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAAc < 2:561742/140‑1 (MQ=255) gATCTTCCGCATGATAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAAc < 2:2717167/140‑1 (MQ=255) ttCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCCAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGaa > 2:599868/1‑140 (MQ=255) cGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTc > 1:1039800/1‑140 (MQ=255) cGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTc > 1:1039588/1‑140 (MQ=255) atgatAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa < 1:2231197/140‑1 (MQ=255) atgatAAACAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATa < 2:1284566/140‑1 (MQ=255) | CAACAAAAAACACCGATTACGAAAAAAGAAGCCAAAACCATTGCTGAGCGAGAAACGGGCGGGACAGCGGATGACGCAGATCTCGAAAAAAGTGAGGGCACTCTCATCTTTGAAGTGGATGTTGATCTTCCGGATGATAAAGAAGCGACTGTGAAAATTAATGCCTACACCGGAAAGGTTGCAAACATTGTGTATGAGGACTGACGGGTTCTCATCAAATTCTCATCTTTCTCTCGTTTTCCTTTCATGTTGAGTGTGTAAACTGAACTCATA > NZ_CP034943/1365974‑1366246 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |