Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,730,0660GC29.5% 171.1 / 15.8 112E163Q (GAA→CAA) rodZcell shape determination protein RodZ
Reads supporting (aligned to +/- strand):  ref base G (44/23);  new base C (0/28);  total (44/68)
Fisher's exact test for biased strand distribution p-value = 2.50e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 113 total aligned reads displayed.

CAGCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGA  >  NZ_CP034943/1729936‑1730205
                                                                                                                                  |                                                                                                                                           
cAGCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACgaaag                                                                                                                                    >  2:1986715/1‑140 (MQ=255)
cAGCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACCATAAAAGAGAATCAAAGCACCAGCTCGGAAAAAGAGGCAGACACTCAAAAAGACACgaagg                                                                                                                                    >  2:2813468/1‑138 (MQ=255)
   cGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACgaaagaaa                                                                                                                                 >  1:211577/1‑140 (MQ=255)
          aaCAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAagaaga                                                                                                                          >  2:2010582/1‑140 (MQ=255)
               tGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAACGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGACAGGAAaggaagggcaaa                                                                                                                     >  1:2076946/1‑134 (MQ=255)
                gCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAATGAAAAAGAAGATaaaaa                                                                                                                    >  1:1375522/1‑140 (MQ=255)
                gCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaaa                                                                                                                    >  1:1026834/1‑140 (MQ=255)
                 ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                     >  2:626250/1‑138 (MQ=255)
                 ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                     <  1:626250/138‑1 (MQ=255)
                  cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaag                                                                                                                  >  2:2448335/1‑140 (MQ=255)
                  cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaag                                                                                                                  >  1:849749/1‑140 (MQ=255)
                  cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaag                                                                                                                  >  2:1046492/1‑140 (MQ=255)
                    cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                >  2:2081811/1‑140 (MQ=255)
                    cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                >  2:750130/1‑140 (MQ=255)
                    cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                >  1:1997083/1‑140 (MQ=255)
                     aTCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaag                                                                                                               >  2:1307564/1‑140 (MQ=255)
                            aaataaatTACCAAAATTTAAAGAAATTACTAAATACAAAAAGATTAAACGATAAAATATAATAAAAGAAACAGCTATTAAAAAGAGGCAGAAACTAAAAAAGAAACGAAATAAAAAGAAGATAAAAAAGAAGAAAGCGa                                                                                                        <  2:2182278/140‑1 (MQ=255)
                            aaaTCAATTACGAAAATTTAAAGAAATTACTAAATACAAAATCATTAAACCCTAAAAGATAATAAAAGCAAAAGCTATGAAAAACAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAACAAGAAAGCGa                                                                                                        <  2:1734206/140‑1 (MQ=255)
                               aaaaTCACTCAAAGTTAACGAAAGTAATAAACCCAAAAATAATAACCGATAAAACATAATCAAAGAAACAGATCTGAAAAAGACGAACACAATAAAAAAGAAACGAAAGAAAAAGAACAAACAAAACAACAACGCGACAg                                                                                                     <  1:2876739/138‑1 (MQ=255)
                                         aatgtcaaaTCAAGTACCAAATCCCAAAACATTAAACGCTAAAATATAATAAAAGCAACATCTCTGAAAAACAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGACGATAAAAAAGAAGAAAGCGACAGTGATAAACTg                                                                                           <  2:1582038/134‑1 (MQ=255)
                                         aaatttaaaGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAATACAAACAAACCAAAAGCTCTCAAAAACAGCCACAAACTAAAAAACAAACTAAACAAAAATAACATAAAAAACAAGAACGCGACAGTGATAAACTg                                                                                           <  2:1265359/134‑1 (MQ=255)
                                         aaaGTTAAATAAACTACCAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGAAACAGCTCTGAAAAACACTCACACACTAAAAAATAAACCAAACAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTg                                                                                           <  2:507368/140‑1 (MQ=255)
                                           aGTGAAAGCAAGTACGAAATCCCACAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAATAAGAAAGCGACAGTGATAAACTGga                                                                                         >  2:168061/1‑140 (MQ=255)
                                                     aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCa                                                                               >  1:2041219/1‑140 (MQ=255)
                                                      gtaataaaTCCAAAAACATTCAACGCTAAAACAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAATAAACCAAACAAAAAGAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCaa                                                                              <  2:849749/135‑1 (MQ=255)
                                                       tACGAAATCCCAAAATATTAAACTCTAAAAGAGAAACAAAGCAACAGCTCTTAAAAAGAGGAAGACAATAAAAAACAACCCAAAGAAAAAGAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             <  2:1026834/140‑1 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCACCGATAAAAGATAATCAAAGCAACAGCTCTGAAAAAGAGGCACACACTAAAAAAGAAACGAAACAAAAATAAGATAAAAAATAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             <  2:2151616/140‑1 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAGAACGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  2:1911895/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATCCTAAAGAAGAAAGCGACCGTGATAAAGTGGAGATTAAAGCAAc                                                                             >  1:2128730/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  2:1591005/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  1:880849/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  1:49763/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  1:458763/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  1:878652/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  1:1801682/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  1:1167249/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  1:1513623/1‑140 (MQ=255)
                                                       tACGAAATCCCAAAAGATTCAACGATAAAAGAGAATAAAAGCAAAATCTCTGAAAAAGAGGCAGACACAAAAAAAGAAACTAAATAAAAAGAACATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             <  2:710735/140‑1 (MQ=255)
                                                       tACGAAATCCCAAAACATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  1:2578320/1‑140 (MQ=255)
                                                       tACGAAATCCAAAAAGATTCAACGCTAAAAGACAAACAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             <  2:1375522/140‑1 (MQ=255)
                                                       cactaaaTCCAAAAATATTAAACCATAAAACAGAATCAACCCAACACCTCTTAAAAAGAGGCAGACACTAAAAAACAAACCAAACAAAAACAACAAAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             <  1:2727193/136‑1 (MQ=255)
                                                         ctaaaaCCCAAAATATTCAACGCTAAAATATAATCAAAGCAACAGCTCTTAAAAATAGGCATACACTAAAAAACAAACGAAAGAAAAACAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                           <  2:1110251/138‑1 (MQ=255)
                                                         ctaaaTCCAAAAAGATTAAACTCTAAAAGAGAATAAAAGAAACAGATCTTAAAAAGAGGCATAAAATAAAAAATAAACCAAACAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                           <  2:2497011/138‑1 (MQ=255)
                                                         ctaaaTCCAAAAAGATACAACGATAAAATAGAATCAAAGAAACAGCTCTTAAAAATAGGAAGAAACTAAAAAAGAAACCAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                           <  2:127326/138‑1 (MQ=255)
                                                         ctaaaCCCAAAAAGATTCAACTAAAAAACAGAATCAAAGAAACAGCTCTAAAAAATAGGCACACAATAAAAAATAACCGAAACAAACACAACATAAAAAAGAAGACCGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                           <  1:2148618/138‑1 (MQ=255)
                                                         ccaaaTCCCAAAAGATTCAACGCTAAAACAGAATCAAAGCACCAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAACAAGATAAAAAAGACGAAAGCGACAGTGATAAACGGGAGATTAAAGCAACTg                                                                           <  2:2286099/138‑1 (MQ=255)
                                                         ccaaaTCCAAAAATATCAACCGCTAAACCACAATCAAACCAACCCCTCTCAAAACGAGCAATAAAATAAAAAAAAACCCAAACAAAAACAATAAAAAAAACAAAAACGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                           <  1:2323005/138‑1 (MQ=255)
                                                                ccAAAAGATTCAACGCTAAAAGATAAACAAAGCAACAGCTCTGAAAAAGAGGCAGAAACTAAAAAATAAACGAAAGAAAAAGAACATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                    <  2:2869128/140‑1 (MQ=255)
                                                                ccAAAAGAATCAACCAAAAACCAGAAACAACCCAACCGCTCTCAAAAACAGCCACACACTAAAAAACAAACGAACCAAACACAACAAAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                    <  1:2192651/140‑1 (MQ=255)
                                                                 cAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                   >  2:1558847/1‑140 (MQ=255)
                                                                 cAAAAGATTCAACGATAAAAGATAATAAAAGCAACAGATATTAAAAAGAGGCAGACAATAAAAAACAAACGAAACAAAAAGAAGAAAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                   <  1:2139897/140‑1 (MQ=255)
                                                                   aaaGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAgc                                                                 >  2:2727193/1‑139 (MQ=255)
                                                                    aaGATTCAACGATAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCATACACAAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAggg                                                                <  2:1982941/140‑1 (MQ=255)
                                                                         taaactatAAAATAGAATAAAAGCAAAAGATATTAAAAAGAGGCAGAAACTAAAAAAGAAACGAAAGAAAAAGAAAATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                           <  2:464308/133‑1 (MQ=255)
                                                                         taaaCGATAAAACAGAAAAAAAGAAACAGCTCTTAAAAAGCGCCATAAAATAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                           <  2:169166/138‑1 (MQ=255)
                                                                         aaaaCTCTAAAACACAATAAAAGCAAAACCAATTAAAAAGAGGCACACACAAAAAAATAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                           <  2:1619986/138‑1 (MQ=255)
                                                                            actaaaaaaGAGAACAAAAGCAACAGCTCTGAAAAAGAGGCACACACTAAAAAACAAACCAACCAAAACGAACATAAAAACCAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  1:1986715/135‑1 (MQ=255)
                                                                            accatAAAAGAGAATCAAACCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAATACACGAAAGAAAAAGAAGAAAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  1:2870923/136‑1 (MQ=255)
                                                                            accatAAAACACAATCAAACCAACCGCTCTTAAAAAGAGCCAGACACTAAAAAAGAAACCAAACAAAAACAACAAACAAAACCACACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  1:141544/136‑1 (MQ=255)
                                                                            accacaaaaGACAAAAAAACAAACACCTCTCAAAAACACGCAGACAAAAAAAAACAAACCAAACAAAAACAACATAAAAAACCACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  1:2378174/135‑1 (MQ=255)
                                                                            aCGCTAAAATAGAATCAACGCAACAGATATTAAAAAGAGGCATACACTAAAAAATAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  2:1447734/140‑1 (MQ=255)
                                                                            aCGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACCAAACAAAAAGAAGATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  2:2652516/140‑1 (MQ=255)
                                                                            aCGCTAAAAGACAATCAAAGCAACAGATATTAAAAAGAGGCACACACAAAAAAACAAACCAAACAAAAAGAAGATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  2:1997083/140‑1 (MQ=255)
                                                                            aCGCTAAAACACAAAAAAACCAACACATCTTAAAAAGACGCAGACACTAAAAAACAAACGAAAGAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  2:2800571/140‑1 (MQ=255)
                                                                            aCGCAAAACTAGACTCAACGCAACAGCTCTGAAAAAGAGGCACACAATAAAAAATAAACCAAAGAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  2:1082278/140‑1 (MQ=255)
                                                                            aCGCAAAAACACAACCAAACCAACAGATATCAAAATCAGCCACACACAAAAAACCAAACCAAACAAAAACACCAAAAAAAACACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  1:1715931/140‑1 (MQ=255)
                                                                            aCGATAAATGAAAATAAAAGCAACACTTCTGAAAAATCGGCAGACAATAAAAAATAAACCAAAGAAAAAGAACATAAAAACGACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  1:2871154/140‑1 (MQ=255)
                                                                            aCGATAAAATAGAATAAAAGCACCAGCTCTGAAAAAGAGTCAGAAACTAAAAAACAAACCAAACAAAACGAACATAAAAAAGAAGACAGCGACAGTGATAAACTGGAGTTTAAAGCAACTGGCACTGAAGGGTCATTacc                                                        <  2:443277/140‑3 (MQ=255)
                                                                            aCGATAAAAGACAATAAAAGCAACAGCTATTAAAAAGAGGCAGACACTAAAAAAGAAACCAAACAAAAACAAGATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  2:2434545/140‑1 (MQ=255)
                                                                            aCGATAAAACAGAATCAAACCAACAGCTCTAAAAAAGAGCCACACACAAAAAAATAAACCAAACAAAAACAACATAAAAAACACCCCCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                        <  1:1716165/140‑1 (MQ=255)
                                                                               cTAAAACACAAACAAACCAACAGCTCTTAAAAAGAGGAACACAATAAAAAACAAACCAAACAAAAAGAACAAAAAAAACACCAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGAc                                                     <  1:1292381/140‑1 (MQ=255)
                                                                               aaaaaataaaatAAAACCAACAGCACTGAAAAAGAGCCACAAACTAAAAAACAAACCAAACAAAAACAACAAAAAAACCACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGAc                                                     <  1:2652204/138‑1 (MQ=255)
                                                                                    cgataaTCAAAGCAAAAGCTCTGAAAAAGAGGCAGACACTAACAAAGAAACGAACGAAAAACAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                <  2:1406445/136‑1 (MQ=255)
                                                                                    agatAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAACAAAAACAAGATAAAAAAGAAGACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                <  2:2220040/140‑1 (MQ=255)
                                                                                    agagAAACAACGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                <  2:1406461/140‑1 (MQ=255)
                                                                                      acaaTAAAACCAACCGATATCAAAAAGAGCCACACACAAAAAAACAAACCAAACAAAAACAACATAAAAACCAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                              <  1:728002/138‑1 (MQ=255)
                                                                                        aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGACAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                            >  1:1913309/1‑140 (MQ=255)
                                                                                        aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                            >  1:2789247/1‑140 (MQ=255)
                                                                                        aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                            >  2:680735/1‑140 (MQ=255)
                                                                                        aaTCAAACAAACCGAACTCAAAAAGAGCCAAAAAATAAAAAAAAACCAAAACAAAAACAACAAAAAACACCACACCGCGACAGTGATAAACTGGAGATTAACGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                            <  1:476724/140‑1 (MQ=255)
                                                                                          tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTTGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt                                          >  2:351587/1‑140 (MQ=255)
                                                                                          tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt                                          >  2:1320569/1‑140 (MQ=255)
                                                                                          tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt                                          >  2:351504/1‑140 (MQ=255)
                                                                                           caacccAACAGATCTCAAAACGCGGCAGACACTAAAAACAAAACCAAACAAAAACACCAAAAAACCCACCCCCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACGGAAGGGTCATTAACGACTTATGAAGTGTc                                         <  1:2448335/135‑1 (MQ=255)
                                                                                           aaacccAACAGAACTTAAAACGAGCCACACAAAAAACAACACACCAACCAAAAACAAGAAACAAACCAAGCACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTc                                         <  1:1911895/135‑1 (MQ=255)
                                                                                              aGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             <  2:2747451/101‑1 (MQ=255)
                                                                                              aGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                             >  1:2747451/1‑101 (MQ=255)
                                                                                                cAACAGATATTAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAACACGAAGATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGgcg                                    <  2:1904635/140‑1 (MQ=255)
                                                                                                      ctctGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTgaga                              >  1:218985/1‑140 (MQ=255)
                                                                                                          cacacacagGCAGACACTAAAACACAAACGAAAGAACAAGAACATAAAAACGAACAAAGCGACAGTGAGAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAAtt                          <  2:1955157/133‑1 (MQ=255)
                                                                                                               agagCCAGACACTAAAAAACAAACGAAAGAAACACAAGATAAACAAGAAGAAAGCGACCGTGATAAACGGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGc                     <  2:2250666/140‑1 (MQ=255)
                                                                                                                gagGCATAAACTAAAAAATAAACGAAAGAAAAATAAGATAAAAAAGCAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                    <  2:437786/140‑1 (MQ=255)
                                                                                                                        cacTAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa            <  2:2128730/140‑1 (MQ=255)
                                                                                                                        caatAAAAAAGAAACGAAATCAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa            <  2:2334449/137‑1 (MQ=255)
                                                                                                                        aacTAAAAAATAAACTAAACAAAAAGAACATAAAAAATAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa            <  2:458763/139‑1 (MQ=255)
                                                                                                                        aaatAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAATAAAGCGACAGTGATAAACTGGAGATTAAAGCAAGTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa            <  2:2726948/137‑1 (MQ=255)
                                                                                                                          atAAAAAACAAACCAAACAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAg          <  1:1053289/139‑1 (MQ=255)
                                                                                                                           tAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAgg         >  1:1080233/1‑140 (MQ=255)
                                                                                                                             aaaaaGAAACGAAACAAAAATAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCa       <  1:1682258/140‑1 (MQ=255)
                                                                                                                                  gAAACGAAAGAAAAAGAACATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa  <  2:2585106/140‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                           
CAGCGATGGTAACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGA  >  NZ_CP034943/1729936‑1730205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑