Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,730,0840GC25.4% 208.7 / 16.4 114D169H (GAT→CAT) rodZcell shape determination protein RodZ
Reads supporting (aligned to +/- strand):  ref base G (43/39);  new base C (0/28);  total (43/71)
Fisher's exact test for biased strand distribution p-value = 5.94e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 116 total aligned reads displayed.

AACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGA  >  NZ_CP034943/1729946‑1730216
                                                                                                                                          |                                                                                                                                    
aaCAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAagaaga                                                                                                                                     >  2:2010582/1‑140 (MQ=255)
     tGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAACGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGACAGGAAaggaagggcaaa                                                                                                                                >  1:2076946/1‑134 (MQ=255)
      gCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAATGAAAAAGAAGATaaaaa                                                                                                                               >  1:1375522/1‑140 (MQ=255)
      gCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaaa                                                                                                                               >  1:1026834/1‑140 (MQ=255)
       ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                                <  1:626250/138‑1 (MQ=255)
       ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaa                                                                                                                                >  2:626250/1‑138 (MQ=255)
        cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaag                                                                                                                             >  1:849749/1‑140 (MQ=255)
        cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaag                                                                                                                             >  2:2448335/1‑140 (MQ=255)
          cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                           >  2:750130/1‑140 (MQ=255)
          cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                           >  1:1997083/1‑140 (MQ=255)
           aTCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaag                                                                                                                          >  2:1307564/1‑140 (MQ=255)
                  aaataaatTACCAAAATTTAAAGAAATTACTAAATACAAAAAGATTAAACGATAAAATATAATAAAAGAAACAGCTATTAAAAAGAGGCAGAAACTAAAAAAGAAACGAAATAAAAAGAAGATAAAAAAGAAGAAAGCGa                                                                                                                   <  2:2182278/140‑1 (MQ=255)
                  aaaTCAATTACGAAAATTTAAAGAAATTACTAAATACAAAATCATTAAACCCTAAAAGATAATAAAAGCAAAAGCTATGAAAAACAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAACAAGAAAGCGa                                                                                                                   <  2:1734206/140‑1 (MQ=255)
                     aaaaTCACTCAAAGTTAACGAAAGTAATAAACCCAAAAATAATAACCGATAAAACATAATCAAAGAAACAGATCTGAAAAAGACGAACACAATAAAAAAGAAACGAAAGAAAAAGAACAAACAAAACAACAACGCGACAg                                                                                                                <  1:2876739/138‑1 (MQ=255)
                               aaatttaaaGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAATACAAACAAACCAAAAGCTCTCAAAAACAGCCACAAACTAAAAAACAAACTAAACAAAAATAACATAAAAAACAAGAACGCGACAGTGATAAACTg                                                                                                      <  2:1265359/134‑1 (MQ=255)
                               aaaGTTAAATAAACTACCAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGAAACAGCTCTGAAAAACACTCACACACTAAAAAATAAACCAAACAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTg                                                                                                      <  2:507368/140‑1 (MQ=255)
                                 aGTGAAAGCAAGTACGAAATCCCACAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAATAAGAAAGCGACAGTGATAAACTGga                                                                                                    >  2:168061/1‑140 (MQ=255)
                                       aGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTaa                                                                                              >  2:1446646/1‑140 (MQ=255)
                                           aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCa                                                                                          >  1:2041219/1‑140 (MQ=255)
                                           aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCa                                                                                          >  1:1644174/1‑140 (MQ=255)
                                            gtaataaaTCCAAAAACATTCAACGCTAAAACAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAATAAACCAAACAAAAAGAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCaa                                                                                         <  2:849749/135‑1 (MQ=255)
                                             tACGAAATCCCAAAATATTAAACTCTAAAAGAGAAACAAAGCAACAGCTCTTAAAAAGAGGAAGACAATAAAAAACAACCCAAAGAAAAAGAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        <  2:1026834/140‑1 (MQ=255)
                                             tACGAAATCCCAAAAGATTCACCGATAAAAGATAATCAAAGCAACAGCTCTGAAAAAGAGGCACACACTAAAAAAGAAACGAAACAAAAATAAGATAAAAAATAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        <  2:2151616/140‑1 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAGAACGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  2:1911895/1‑140 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATCCTAAAGAAGAAAGCGACCGTGATAAAGTGGAGATTAAAGCAAc                                                                                        >  1:2128730/1‑140 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  2:1591005/1‑140 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  1:1801682/1‑140 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  1:880849/1‑140 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  1:878652/1‑140 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  1:1167249/1‑140 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  1:458763/1‑140 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  1:49763/1‑140 (MQ=255)
                                             tACGAAATCCCAAAAGATTCAACGATAAAAGAGAATAAAAGCAAAATCTCTGAAAAAGAGGCAGACACAAAAAAAGAAACTAAATAAAAAGAACATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        <  2:710735/140‑1 (MQ=255)
                                             tACGAAATCCCAAAACATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  1:2578320/1‑140 (MQ=255)
                                             tACGAAATCCAAAAAGATTCAACGCTAAAAGACAAACAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        <  2:1375522/140‑1 (MQ=255)
                                             cactaaaTCCAAAAATATTAAACCATAAAACAGAATCAACCCAACACCTCTTAAAAAGAGGCAGACACTAAAAAACAAACCAAACAAAAACAACAAAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        <  1:2727193/136‑1 (MQ=255)
                                               ctaaaaCCCAAAATATTCAACGCTAAAATATAATCAAAGCAACAGCTCTTAAAAATAGGCATACACTAAAAAACAAACGAAAGAAAAACAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                                      <  2:1110251/138‑1 (MQ=255)
                                               ctaaaTCCAAAAAGATTAAACTCTAAAAGAGAATAAAAGAAACAGATCTTAAAAAGAGGCATAAAATAAAAAATAAACCAAACAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                                      <  2:2497011/138‑1 (MQ=255)
                                               ctaaaTCCAAAAAGATACAACGATAAAATAGAATCAAAGAAACAGCTCTTAAAAATAGGAAGAAACTAAAAAAGAAACCAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                                      <  2:127326/138‑1 (MQ=255)
                                               ctaaaCCCAAAAAGATTCAACTAAAAAACAGAATCAAAGAAACAGCTCTAAAAAATAGGCACACAATAAAAAATAACCGAAACAAACACAACATAAAAAAGAAGACCGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                                      <  1:2148618/138‑1 (MQ=255)
                                               ccaaaTCCCAAAAGATTCAACGCTAAAACAGAATCAAAGCACCAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAACAAGATAAAAAAGACGAAAGCGACAGTGATAAACGGGAGATTAAAGCAACTg                                                                                      <  2:2286099/138‑1 (MQ=255)
                                               ccaaaTCCAAAAATATCAACCGCTAAACCACAATCAAACCAACCCCTCTCAAAACGAGCAATAAAATAAAAAAAAACCCAAACAAAAACAATAAAAAAAACAAAAACGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                                      <  1:2323005/138‑1 (MQ=255)
                                                taaaTACAAAAATATTCAACTATAAAAGAGAATAAAAGCAACAGATCTTAAAAAGAGGAATACACTAAAAAACAAACGAAACAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTgg                                                                                     <  2:211577/139‑1 (MQ=255)
                                                      ccAAAAGAATCAACCAAAAACCAGAAACAACCCAACCGCTCTCAAAAACAGCCACACACTAAAAAACAAACGAACCAAACACAACAAAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                               <  1:2192651/140‑1 (MQ=255)
                                                       cAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                              >  2:1558847/1‑140 (MQ=255)
                                                       aaaaaGATTAAACGATAAAACACAAACAAAGCAACAGCTCTGAAAAAGAGCCACAAAAAAAAAAACAACCCAAACAAAAACAACATAAAAAACACCACCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa                                                                              <  1:648418/139‑1 (MQ=255)
                                                         aaaGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAgc                                                                            >  2:2727193/1‑139 (MQ=255)
                                                          aaGATTCAACGATAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCATACACAAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAggg                                                                           <  2:1982941/140‑1 (MQ=255)
                                                               taaaCGATAAAACAGAAAAAAAGAAACAGCTCTTAAAAAGCGCCATAAAATAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                                      <  2:169166/138‑1 (MQ=255)
                                                               tCAACGCTAAACGACAAACAAAGCCACCGCTCTGAAAAAGAGGCACACACTAAAAAACAAACCAAAGAAAAAGAACATAAAAAAGAACCAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                                      <  2:459958/140‑1 (MQ=255)
                                                               aaaaCTCTAAAACACAATAAAAGCAAAACCAATTAAAAAGAGGCACACACAAAAAAATAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                                      <  2:1619986/138‑1 (MQ=255)
                                                                  actaaaaaaGAGAACAAAAGCAACAGCTCTGAAAAAGAGGCACACACTAAAAAACAAACCAACCAAAACGAACATAAAAACCAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  1:1986715/135‑1 (MQ=255)
                                                                  accatAAAAGAGAATCAAACCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAATACACGAAAGAAAAAGAAGAAAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  1:2870923/136‑1 (MQ=255)
                                                                  accatAAAACACAATCAAACCAACCGCTCTTAAAAAGAGCCAGACACTAAAAAAGAAACCAAACAAAAACAACAAACAAAACCACACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  1:141544/136‑1 (MQ=255)
                                                                  accacaaaaGACAAAAAAACAAACACCTCTCAAAAACACGCAGACAAAAAAAAACAAACCAAACAAAAACAACATAAAAAACCACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  1:2378174/135‑1 (MQ=255)
                                                                  aCGCTAAAATAGAATCAACGCAACAGATATTAAAAAGAGGCATACACTAAAAAATAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  2:1447734/140‑1 (MQ=255)
                                                                  aCGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACCAAACAAAAAGAAGATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  2:2652516/140‑1 (MQ=255)
                                                                  aCGCTAAAAGACAATCAAAGCAACAGATATTAAAAAGAGGCACACACAAAAAAACAAACCAAACAAAAAGAAGATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  2:1997083/140‑1 (MQ=255)
                                                                  aCGCTAAAACACAATCAAAGAAACAGCTCTGAAAAAGAGCCACACAATAAAAAAGAAACCAAACAAAAAGAACATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  1:2285150/140‑1 (MQ=255)
                                                                  aCGCTAAAACACAAAAAAACCAACACATCTTAAAAAGACGCAGACACTAAAAAACAAACGAAAGAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  2:2800571/140‑1 (MQ=255)
                                                                  aCGCAAAACTAGACTCAACGCAACAGCTCTGAAAAAGAGGCACACAATAAAAAATAAACCAAAGAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  2:1082278/140‑1 (MQ=255)
                                                                  aCGCAAAAACACAACCAAACCAACAGATATCAAAATCAGCCACACACAAAAAACCAAACCAAACAAAAACACCAAAAAAAACACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  1:1715931/140‑1 (MQ=255)
                                                                  aCGATAAAATAGAATAAAAGCACCAGCTCTGAAAAAGAGTCAGAAACTAAAAAACAAACCAAACAAAACGAACATAAAAAAGAAGACAGCGACAGTGATAAACTGGAGTTTAAAGCAACTGGCACTGAAGGGTCATTacc                                                                   <  2:443277/140‑3 (MQ=255)
                                                                  aCGATAAAAGACAATAAAAGCAACAGCTATTAAAAAGAGGCAGACACTAAAAAAGAAACCAAACAAAAACAAGATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  2:2434545/140‑1 (MQ=255)
                                                                  aCGATAAAACAGAATCAAACCAACAGCTCTAAAAAAGAGCCACACACAAAAAAATAAACCAAACAAAAACAACATAAAAAACACCCCCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                   <  1:1716165/140‑1 (MQ=255)
                                                                     cTAAAACACAAACAAACCAACAGCTCTTAAAAAGAGGAACACAATAAAAAACAAACCAAACAAAAAGAACAAAAAAAACACCAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGAc                                                                <  1:1292381/140‑1 (MQ=255)
                                                                     aaaaaataaaatAAAACCAACAGCACTGAAAAAGAGCCACAAACTAAAAAACAAACCAAACAAAAACAACAAAAAAACCACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGAc                                                                <  1:2652204/138‑1 (MQ=255)
                                                                          cgataaTCAAAGCAAAAGCTCTGAAAAAGAGGCAGACACTAACAAAGAAACGAACGAAAAACAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                           <  2:1406445/136‑1 (MQ=255)
                                                                          agatAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAACAAAAACAAGATAAAAAAGAAGACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                           <  2:2220040/140‑1 (MQ=255)
                                                                          agagAAACAACGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                           <  2:1406461/140‑1 (MQ=255)
                                                                            acaaTAAAACCAACCGATATCAAAAAGAGCCACACACAAAAAAACAAACCAAACAAAAACAACATAAAAACCAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                         <  1:728002/138‑1 (MQ=255)
                                                                              aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                       >  1:2789247/1‑140 (MQ=255)
                                                                              aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                       >  2:2425097/1‑140 (MQ=255)
                                                                              aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                       >  2:680735/1‑140 (MQ=255)
                                                                              aaTCAAACAAACCGAACTCAAAAAGAGCCAAAAAATAAAAAAAAACCAAAACAAAAACAACAAAAAACACCACACCGCGACAGTGATAAACTGGAGATTAACGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                       <  1:476724/140‑1 (MQ=255)
                                                                                tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTTGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt                                                     >  2:351587/1‑140 (MQ=255)
                                                                                tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt                                                     >  2:351504/1‑140 (MQ=255)
                                                                                 aaacccAACAGAACTTAAAACGAGCCACACAAAAAACAACACACCAACCAAAAACAAGAAACAAACCAAGCACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTc                                                    <  1:1911895/135‑1 (MQ=255)
                                                                                    aGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        >  1:2747451/1‑101 (MQ=255)
                                                                                    aGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                        <  2:2747451/101‑1 (MQ=255)
                                                                                            ctctGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTgaga                                         >  1:218985/1‑140 (MQ=255)
                                                                                                cacacacagGCAGACACTAAAACACAAACGAAAGAACAAGAACATAAAAACGAACAAAGCGACAGTGAGAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAAtt                                     <  2:1955157/133‑1 (MQ=255)
                                                                                                      gagGCATAAACTAAAAAATAAACGAAAGAAAAATAAGATAAAAAAGCAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                               <  2:437786/140‑1 (MQ=255)
                                                                                                      gagGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                               >  2:1251419/1‑140 (MQ=255)
                                                                                                      gagGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                               >  1:2753990/1‑140 (MQ=255)
                                                                                                            gACACTAAAAAATAAACCAAAGAAAAATAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACt                         <  2:2783652/140‑1 (MQ=255)
                                                                                                              cacTAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                       <  2:2128730/140‑1 (MQ=255)
                                                                                                              caatAAAAAAGAAACGAAATCAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                       <  2:2334449/137‑1 (MQ=255)
                                                                                                              aacTAAAAAATAAACTAAACAAAAAGAACATAAAAAATAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                       <  2:458763/139‑1 (MQ=255)
                                                                                                              aaatAAAAAACAAACGAAACAAAAAGAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                       <  2:1801682/137‑1 (MQ=255)
                                                                                                              aaatAAAAAACAAACGAAACAAAAAGAAGATAAAAAAGAATAAAGCGACAGTGATAAACTGGAGATTAAAGCAAGTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                       <  2:2726948/137‑1 (MQ=255)
                                                                                                                caaaaaaaCAAACGAAAGAAAAATAACATAAAAACGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAg                     <  1:2028480/138‑1 (MQ=255)
                                                                                                                atAAAAAACAAACCAAACAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAg                     <  1:1053289/139‑1 (MQ=255)
                                                                                                                 tAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAgg                    >  1:1080233/1‑140 (MQ=255)
                                                                                                                   aaaaaGAAACGAAACAAAAATAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCa                  <  1:1682258/140‑1 (MQ=255)
                                                                                                                        caaaCCAAACAAAATCAACATAAAAAAGACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa             <  1:848113/139‑1 (MQ=255)
                                                                                                                         aaaCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAAGACTTATTAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTCAAGGCATCAGaa            >  2:200939/1‑139 (MQ=255)
                                                                                                                           aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAATGCATCAGACAg          >  2:1491656/1‑140 (MQ=255)
                                                                                                                           aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg          >  2:2221819/1‑140 (MQ=255)
                                                                                                                                   aaatgaaGATAAAAACGACGACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGCAGTGTCCGGCTCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGa  <  2:2432102/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                    
AACAATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGA  >  NZ_CP034943/1729946‑1730216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑