| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 165765 | 421 (1.730) | 4 (0.020) | 4/248 | NT | 0.97% | intergenic (+1/‑61) | EO946_RS00965/EO946_RS00970 | tRNA‑Thr/tRNA‑Gly |
| ? | NZ_CP034943 | 165770 = | 406 (1.700) | intergenic (+6/‑56) | EO946_RS00965/EO946_RS00970 | tRNA‑Thr/tRNA‑Gly | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 461 total aligned reads displayed.
CAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCTCCATCTT > NZ_CP034943/165627‑165904 | gTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTttat < 2:507838/140‑1 (MQ=255) tGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTttatt < 1:774551/140‑1 (MQ=255) gTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTaa > 1:2713754/1‑140 (MQ=255) gTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTaa < 2:1819502/140‑1 (MQ=255) agCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGt > 2:2782187/1‑140 (MQ=255) cTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtat < 2:178777/140‑1 (MQ=255) aTCGGCTGTTACCCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta > 1:1002644/1‑140 (MQ=255) aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGACGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta > 1:2059609/1‑140 (MQ=255) aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta > 1:3359024/1‑140 (MQ=255) aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta > 1:491826/1‑140 (MQ=255) aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta > 1:1185289/1‑140 (MQ=255) aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta > 1:730356/1‑140 (MQ=255) aTCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGtatta > 2:111455/1‑140 (MQ=255) ttAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGACGCTGTATTAAATGGATTATTACCAAg > 2:3939759/1‑140 (MQ=255) ttAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAAt > 1:546333/1‑126 (MQ=255) ttAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAAt < 2:546333/126‑1 (MQ=255) tAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAgg < 2:2363662/140‑1 (MQ=255) aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGTAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGTTTactc > 2:2195225/1‑140 (MQ=255) aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc > 1:2114983/1‑140 (MQ=255) aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc > 1:3412480/1‑140 (MQ=255) aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc > 2:1465357/1‑140 (MQ=255) aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc > 2:1726973/1‑140 (MQ=255) aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc > 2:2144993/1‑140 (MQ=255) aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTtctc > 2:3018283/1‑140 (MQ=255) aTCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTGTATTAAATGTATTATTACCAAGGTTtctc > 2:2911393/1‑140 (MQ=255) gcagccTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGTGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt < 1:1453300/136‑1 (MQ=255) gAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCt > 2:90718/1‑140 (MQ=255) aTCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCttt < 2:2039421/140‑1 (MQ=255) ccTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCttttt < 1:199036/140‑1 (MQ=255) ccTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCttttt < 1:1484081/140‑1 (MQ=255) cGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCg > 1:3094973/1‑140 (MQ=255) cGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCg > 2:1163060/1‑140 (MQ=255) cGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCg < 2:2563347/140‑1 (MQ=255) cGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCg < 2:3149201/140‑1 (MQ=255) ggAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGa < 2:596949/140‑1 (MQ=255) cATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGc < 1:1039423/140‑1 (MQ=255) cgtCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAag < 1:373183/138‑1 (MQ=255) cTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAag < 1:2161419/140‑1 (MQ=255) cTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAag < 1:3457161/140‑1 (MQ=255) ccATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTAGTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAagtag < 2:285108/140‑1 (MQ=255) cATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAagtagt > 1:394712/1‑140 (MQ=255) cATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAagtagt > 2:3750934/1‑140 (MQ=255) aTAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGtt < 2:636267/140‑1 (MQ=255) tAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTc < 2:3583346/140‑1 (MQ=255) tcTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTAGAGCCCGATTGGAATCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAATCTTTTTTTATTGCGATATGCGGAAGTAGTTCAg < 1:2606708/139‑1 (MQ=255) gCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCACAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAg < 1:1344995/140‑1 (MQ=255) gCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAg < 1:814378/140‑1 (MQ=255) gCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAg < 1:971744/140‑1 (MQ=255) gCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTAGTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAg < 1:154539/140‑1 (MQ=255) cagcagGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTgg < 1:1244889/140‑1 (MQ=255) agcagGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGt < 2:2446718/140‑1 (MQ=255) gcagGTAGAGCACTTCCGTGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTa < 1:406462/140‑1 (MQ=255) cagGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAag > 1:3696186/1‑126 (MQ=255) cagGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGtt > 1:3330432/1‑131 (MQ=255) cagGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAg > 1:190015/1‑140 (MQ=255) agagCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAacac > 1:3822447/1‑140 (MQ=255) agagCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAAGGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAacac > 1:1774585/1‑140 (MQ=255) agCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAAcacca > 2:1349168/1‑140 (MQ=255) gCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAAcaccac > 1:2948592/1‑140 (MQ=255) gCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAAcaccac > 2:3706774/1‑140 (MQ=255) gCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAAcaccac > 1:2665512/1‑140 (MQ=255) ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGACAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc > 1:229156/1‑140 (MQ=255) ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc > 2:1596917/1‑140 (MQ=255) ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc > 2:1263995/1‑140 (MQ=255) ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc < 2:691658/140‑1 (MQ=255) ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc < 2:3435938/140‑1 (MQ=255) ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc < 1:3922090/140‑1 (MQ=255) ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc < 2:1541974/140‑1 (MQ=255) ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc < 2:1175703/140‑1 (MQ=255) ccATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAAGGTATTATTACCAAGGTTTCTCAAAAAGGAGAGAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc > 2:1212512/1‑140 (MQ=255) tGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAg > 1:171369/1‑140 (MQ=255) gTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGt > 2:220492/1‑140 (MQ=255) aGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTggg > 2:3907623/1‑140 (MQ=255) agGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGt < 1:871757/110‑1 (MQ=255) agGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGt > 2:3632062/1‑110 (MQ=255) agGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGt < 1:3632062/110‑1 (MQ=255) ggTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTcgcg < 2:1425505/140‑1 (MQ=255) ggTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTcgcg < 2:190015/140‑1 (MQ=255) gTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTCTTATTACCAAGGTTTCTCAAAAACGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACGTTGCCAAGGTGGGGGTCGCgg > 1:3486853/1‑140 (MQ=255) gTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTgg > 1:2801655/1‑107 (MQ=255) gTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGcc > 2:2613165/1‑124 (MQ=255) gTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCgg > 1:1589653/1‑140 (MQ=255) gTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCgg > 1:3561263/1‑140 (MQ=255) gTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCgg > 1:2498936/1‑140 (MQ=255) gTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATGAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGACAGCTTTTTTTCTTGCGCTATGCGGAAGTAGTTCAGTGGTAGACCCCCACCTTGCCATGGTGGGGGTCGCgg > 1:1301516/1‑140 (MQ=38) gTCAGCGGTTCGAGCCCGCGTGGACGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTGCAGTGGTAGAACACCACCTTGCCAAGGGGGGGGTCGCgg > 2:2527825/1‑140 (MQ=255) gTCAGCGGTTCGAACCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCgg > 1:1163553/1‑140 (MQ=255) gcAGCGGGTCGAGCCCGCTTGGAAGCTTTATTACATGTATTATTACCAAGCGTTCTCAAAAAGGAGAAAGCTTTGTCTAGTGCGATAGGCGGACGTACTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCggg < 2:1009985/139‑1 (MQ=25) gCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAg > 1:1430154/1‑100 (MQ=255) cTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTcc > 1:2422767/1‑140 (MQ=255) cTTGGAAGCTTTATTAAATGTAGTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTcc > 1:660463/1‑140 (MQ=255) ggAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCt < 2:3977099/140‑1 (MQ=255) ggAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGAGATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCt < 2:764392/140‑1 (MQ=255) gAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCTc < 2:3094973/140‑1 (MQ=255) cTTTATTAAATGTATTCTTACCAAGCTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCCGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCTCCATc < 2:3290181/140‑1 (MQ=255) cTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCTCCATc < 2:3465769/140‑1 (MQ=255) cTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCTCCATc < 2:406202/140‑1 (MQ=255) atttATTAAATGTATTATTAGCTAGGTTTCTCAAAAAGGAGATATCTTTTTTTATTGCGATATGCGGAAGTAGTTGAGTTGTAGAACACCACCTTGCGAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTGCGATCCATc < 2:3361395/139‑1 (MQ=21) ttaaatgtattattaccaaggtttctcaaaaaggagaaagctttttttattgcgatatgcggaagtagttcagtggtagaacaccaccttgccaaggtgggggtcgcgggttcgaatcccgtcttccgctccatcttatc > 2:3538727‑M1/1‑2 (MQ=255) ttaaatgtattattaccaaggtttctcaaaaaggagaaagctttttttattgcgatatgcggaagtagttcagtggtagaacaccaccttgccaaggtgggggtcgcgggttcgaatcccgtcttccgctccatcttatc > 2:2260658‑M1/1‑2 (MQ=255) | CAGTGGTAGAGCTATCGGCTGTTAACCGATCGGTCGTAGGTTCGAATCCTACCTGCGGAGCCATTGCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGTCAGCGGTTCGAGCCCGCTTGGAAGCTTTATTAAATGTATTATTACCAAGGTTTCTCAAAAAGGAGAAAGCTTTTTTTATTGCGATATGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGTCGCGGGTTCGAATCCCGTCTTCCGCTCCATCTT > NZ_CP034943/165627‑165904 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |