BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607695 =	116 (0.480)	24 (0.110) +AGTAGCCCCT	13/232	NT	11.0%	coding (538/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	= 607846	306 (1.260)	24 (0.110) +AGTAGCCCCT	13/232	NT	11.0%	coding (689/1125 nt)	EO946_RS03185	collagen‑like protein

Only 100 of 175 total aligned reads displayed.

CCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGC  >  NZ_CP034943/607558‑607834

ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGGCCTAGCGGAGCGACAGGAGCTACCggg                                                                                                                                           >  1:1586292/1‑140 (MQ=17)

caggagctaccggggaaggcggaccacccggagcgtcgggagccaccggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggg                                                                                                                                           >  1:3764882‑M1/138‑140 (MQ=255)

 aggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactgggg                                                                                                                                          <  1:935191‑M1/4‑1 (MQ=255)

      ctaccggggaagccggaccaaccggagcgacgtgagccacaggggctactggggaggtcgcaccagccggagcgacaggcgctacgggggaagccggaccaaccggagcgccgggagccacgggggctactggggacggc                                                                                                                                     <  2:766676‑M1/9‑5 (MQ=255)

         cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                                                           >  1:885984/1‑131 (MQ=255)

         cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAGGCCGGa                                                                                                                                  >  2:1235956/1‑140 (MQ=255)

         cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                                  <  1:2578010/140‑1 (MQ=255)

          cggggaagccggaccaaccggagcgacgggagccacaggggctagtggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactGGGGACGTCGGAc                                                                                                                                 <  2:3917748‑M1/13‑1 (MQ=255)

             ggaagccggaccaaccggagcgacgggagccacaggggctactggcgacgtcggaccagcgggagcgaccggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctaggGGGGAGGTCGCACCAg                                                                                                                              <  1:557946‑M1/16‑1 (MQ=255)

              gCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                                                             <  2:1636533/140‑1 (MQ=255)

                 gccggaccaaccggagcgacgggagccacatgggctactggggacgtcggaccagccggagggacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctaatGGGGACGGAGGACCAGCCgg                                                                                                                          <  2:3288449‑M1/20‑1 (MQ=255)

                 gccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgccaggagctaccggggaagccggaccaaccggcgcgacgggagccacaggggctcctGGGGACGTCGGACCAGCCgg                                                                                                                          <  2:3662474‑M1/20‑1 (MQ=255)

                 gccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactGGGCACGTCGGACCAGCCgg                                                                                                                          <  2:2471568‑M1/20‑1 (MQ=255)

                 acaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                                          <  1:1273872/140‑1 (MQ=255)

                   aGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                                                                                                                        <  2:2245395/140‑1 (MQ=255)

                      accaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctacgGGGGACGTCGGACCAGCCGGAGCGa                                                                                                                     <  2:314803‑M1/25‑1 (MQ=255)

                       gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAGCCCGGACCAGCCGGAGctcc                                                                                                                    >  2:3950316/1‑137 (MQ=14)

                         cccTGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACGGGCGAAGCCGGAGCAGCCGGAGCCCCAGGAGCTCCGGGCGACGCAGGAGCTACCGGAGCGACAGGAGCTACCGGCGAACCCGGACCAGCCGGAGCGACAg                                                                                                                  <  1:3634389/138‑1 (MQ=14)

                         caCTGCGGACGCCGGACCCGCCGGCGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                                                  <  1:2669656/139‑1 (MQ=14)

                          ccgggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCTGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                                 <  1:3939354/137‑1 (MQ=255)

                          accggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactGGGGACGTCGGACCAGCCGGAGCGACAgg                                                                                                                 <  2:3382344‑M1/29‑1 (MQ=255)

                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACCGGAGCGACC‑GGGCCGCCGGCGCAGCCGGAGCGACAGGa                                                                                                                >  2:1643770/1‑140 (MQ=14)

                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAACCGGAGCGACCGGAGCGCCCGGGGCAGCCGGACAAACCGGAGCgcccgg                                                                                                                 >  2:609040/1‑135 (MQ=11)

                          aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGCGAAGCCGGACCAGCCGGAGCTACCGGAGCGACCGGCGCGCCCGGAGCAGCCGGAgacgcagc                                                                                                                 >  2:3471282/1‑133 (MQ=11)

                            cggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                                               <  2:3008840/139‑1 (MQ=39)

                               agcgacgggagccacaggggctcctggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccaccggggctcctGGGCCCGGCGGACCAGCCGGAgcgccagccgcga                                                                                                            <  2:2311011‑M1/34‑7 (MQ=255)

                               agcgacgggagccacaggggcaactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctccgGGCGACGGCGGACCAGCCGGAGCGTCAGGAGCTa                                                                                                            <  2:2899062‑M1/34‑1 (MQ=255)

                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGGCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGTAGCTCAAGGGGAAGCCGGACCAGCCGGAGCGACACGAGCTccc                                                                                                          >  1:344714/1‑140 (MQ=14)

                                 aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCTACCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                                                          >  1:1596108/1‑140 (MQ=255)

                                   gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                                                                        >  2:2185551/1‑140 (MQ=255)

                                   gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAGCCGGagcgaccggagcgaccgg                                                                                                        >  2:2407432/1‑140 (MQ=255)

                                    ccGGACCCGCAGGAGCGAGTTGAGCTACCGGGGTTGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                                       <  1:3340074/140‑1 (MQ=14)

                                        agccacaggggctactgcccacgtcggcccagccgcagcgacaggagctaccggggaagccggaccaaacggagcgtggggagccacaggggctactGGGGAAGTCGTACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                   >  1:3949107‑M1/98‑140 (MQ=255)

                                        aCCCGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGTGGAAGCCCGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                   <  1:931463/140‑1 (MQ=255)

                                        aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCAGGACCAGCCGGAGCGACAGGAGCTACAGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGacg                                                                                                   >  1:1868117/1‑138 (MQ=14)

                                             ccGGCGCGACAGGAGCTACCGGCGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                              <  1:2505022/140‑1 (MQ=255)

                                             ccGGAGCGCCTGGAGCCTCGGGGGACCCCCGACCAGACGGAGCCACAGGAGCTCACGGTGAACCCGGACCAACCGGAGCCACAGGAGCTACAGGCCAAGCGGGACCAGCGGGAGCCACAGGAGCTACCGGGGAAGCCGGa                                                                                              <  1:1799264/140‑1 (MQ=9)

                                             ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                              >  1:982882/1‑140 (MQ=255)

                                             ccGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                              <  1:2795030/140‑1 (MQ=255)

                                             ccGGAGCCACCGGAGCTCCGGGGGAAGCGGGACCAGCCGGAGCGACAGCAGCTTCCCGCGAATCCGGACCAACCGGAGCGACAGGCGCTACCGGCGAAGCCGGACAAGACGGACCGACAGGAGCTACCGGGGAAGCCGGa                                                                                              <  1:672752/140‑1 (MQ=11)

                                                 aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAGGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCaa                                                                                          <  1:1235956/140‑1 (MQ=255)

                                                      cAGGAGCGCCCGGGGACGCCGGACCCGCCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCGGGACCAGCCGTAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                                     <  1:3874389/140‑1 (MQ=14)

                                                      cAGGAGCGACCGGGGACGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                                     <  1:774268/140‑1 (MQ=255)

                                                            cTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGTAGCGACAGGGGACGACGGACCAACCGGAGCCACg                                                                               >  1:113854/1‑140 (MQ=14)

                                                              aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                                             <  2:349043/140‑1 (MQ=255)

                                                               ccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGAAATGGGCAGCCGGAGCAGCCGGAGCGACAGGAGCGACCGGCGACGCCGGACCAACCGGAGCGAGGGGa                                                                            >  2:1724022/1‑140 (MQ=14)

                                                                cGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAAACAGGAACAGCCGGAGCGACAGTAGCAACCGACGAATCCAGACCACACGCAGAGACAGGac                                                                           >  1:1026467/1‑139 (MQ=11)

                                                                  ggcaaGCTGGACCACCGGGAGCCCCAGGAGATACGGGCGACCCCGGACCTACCGGCGACCCAGGACCTCCCGGGGATTCCGGACCCCCCGGAGCTACAGGTGCTCCCGGCGAAGCCGGACCAACCGGAGCGACGGGAGcc                                                                         <  2:966804/137‑1 (MQ=2)

                                                                  gcccaGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGcc                                                                         <  2:2722623/136‑1 (MQ=255)

                                                                    gacgCCGGACCCGCCGTATCGACAGCCGCGACCGCGGAAGCAGGACCAACCGGAGCTACAGGAGCGCCCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                                       <  2:1967000/137‑1 (MQ=14)

                                                                    gAAGCCGGAGCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                                       <  1:3952849/140‑1 (MQ=255)

                                                                     caGCCGGACCAGCCGGAGCGACAGCAGCTACCGGGGAAGCCGGGGCCACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                                      <  2:1586292/139‑1 (MQ=14)

                                                                     aaGCCGGACCCGCCGGCGCCAGAGGCGCTACCGGGGAAGCCGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                                      <  2:390298/140‑1 (MQ=14)

                                                                      aGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCCGCCGGACCAACAGGAGCGACAGGAGCGACCGGGGACGCCGTACCAGACTGAGCGTCAGGAGCTCGCGCGCAAGCCGGTCCACCCGGAGCGGCGGGAGCCCCAg                                                                     >  1:1960971/1‑140 (MQ=14)

                                                                       gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                                                    <  1:1041743/140‑1 (MQ=255)

                                                                         cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCACCCGGAGCGCCGGGAGCCACAggcg                                                                  >  2:3943661/1‑138 (MQ=255)

                                                                         cGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                                                  <  1:2186345/140‑1 (MQ=255)

                                                                                     agccccAGGAGCTCCCGGTGAACCCGGAGCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                                                      <  1:2751041/135‑1 (MQ=17)

                                                                                     aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGGGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCCACAGGCGCGACTGGGGACg                                                      >  2:884393/1‑140 (MQ=255)

                                                                                     aGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                                                      <  1:3684362/140‑1 (MQ=255)

                                                                                       ctaccggggaagctggaccagctggagcgacgggagcgACAGGAGCTACGGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGGGCTACTGGGGACGTc                                                    >  1:72225‑M2/39‑140 (MQ=255)

                                                                                          ccggggacgccggacccaccggagccacgggagccaccggcgcttctGGCGACGCCGGAGCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGa                                                 >  1:1738283‑M1/48‑140 (MQ=255)

                                                                                               gacgccggcccagccggagccaccgccgccACAGCCGCTACCGGGGACGGCGGACCAGCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGc                                            <  2:1868117‑M2/110‑1 (MQ=255)

                                                                                                cgtccGGGGCCGCCGGTCCAACCGGTGCTACAGGTGCTTCCGGGGAAGCGGGACCCCCGGGAGCGACAGGAGCTAGCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGcc                                           <  2:737555/137‑1 (MQ=18)

                                                                                                cTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACACCGGACCACCCGGAGCGACGGGAGCCCCAGGGGCTCCTGGGGACGGCGGCCCAGcc                                           >  2:1125589/1‑140 (MQ=17)

                                                                                                  gccggaccaaccggagcgacgggagccacaggggctactGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                                         <  2:2633917‑M1/101‑1 (MQ=255)

                                                                                                  gccggaccaaccggagcgacgggagccacaggggctactGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                                         <  1:518341‑M1/101‑1 (MQ=255)

                                                                                                  actggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGCCCAGCCGGAGCGACGGGAGCCACCGGGGCGACGGGGGACGCCGGAGCCGCCgg                                         >  2:656548/4‑140 (MQ=11)

                                                                                                  accgcctaaGCCGGACCCACCGGAGCGGCGGGAGCGACGTGGTATCCCGGAGCCTCGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                                         <  1:3579076/133‑1 (MQ=17)

                                                                                                  aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                                       >  2:2675495/1‑110 (MQ=255)

                                                                                                  aCCGGGGAAGCCGGACAAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACACCAGCTACCGGGGAAGCAGGACCAACCGGAGCGACGGGAGCCACAGGCGCAACGTGGGACGTCGGACCAGCCga                                         >  2:1804949/1‑139 (MQ=17)

                                                                                                   ccGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCTGAGCGACCGGGGCAGCAGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACGGGGGACGTAGGACCAGCCGGa                                        >  2:1249760/1‑140 (MQ=18)

                                                                                                   ccGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCAGGAGCTGCAGGAGCGACAGGGGAAGCCGGACCAACCGGAGCCTCGGGAGCCACAGGGGCTACTGGGGAGCTCGGACCAGCCGGa                                        >  2:1424556/1‑140 (MQ=18)

                                                                                                    cgcaccagcgggagcgacgggagcgACAGGCGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAg                                       <  2:72225‑M2/115‑1 (MQ=255)

                                                                                                    cGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACACGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAg                                       <  1:3081348/140‑1 (MQ=255)

                                                                                                     ggggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                                             >  2:1926187/1‑101 (MQ=35)

                                                                                                        gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCAACCGGCGACGCCGGCCCACCCGGAGCGCCGGGAGCCACAGCCGCGACGGGGGACGTCGGACCAGCCGGAGCgcc                                   >  2:3132731/1‑138 (MQ=17)

                                                                                                        gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                            >  2:1677780/1‑51 (MQ=35)

                                                                                                        gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                            <  1:1677780/51‑1 (MQ=35)

                                                                                                           gCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGAACAACCGGAGCTAGGGTAGCCACAGGGGGTACGGGGGACCTCGGACCGGCCTGAGCGACAgg                                >  2:803670/1‑140 (MQ=17)

                                                                                                                    aCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                                                             <  2:3842468/38‑1 (MQ=33)

                                                                                                                    aCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCgg                       >  2:2266564/1‑140 (MQ=255)

                                                                                                                    aCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGCGCGACTGGCGCCGGCGGACCAGCCGGAGCGGCAGGAGCGACCgt                       >  2:1299282/1‑139 (MQ=18)

                                                                                                                     cgggagccacaggggctactGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCggg                      <  1:3105407‑M1/120‑1 (MQ=255)

                                                                                                                     ccGGAGCGACAGGCGCTACCGGCGAAGCCGGAGCTGCCGGAGCTACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCggg                      <  2:459913/140‑1 (MQ=18)

                                                                                                                         cgCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGCCGGGAGCCACAGGGGCTCCTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                  <  1:1932502/139‑1 (MQ=255)

                                                                                                                         aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAACCAGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                  >  1:97546/1‑140 (MQ=255)

                                                                                                                         aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAACCGCAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                  >  1:1176545/1‑140 (MQ=255)

                                                                                                                           ccacaggggctactGGGGACGCCGGACCAGCCGGAGCGACAgg                                                                                                                 <  1:2176340‑M1/29‑1 (MQ=255)

                                                                                                                             aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCGGCGCAACAGGCGCCGGCGGAGCTGCCTGAGCGGCATGAGCTCCGGGGGAAGcagc              >  2:1343848/1‑137 (MQ=14)

                                                                                                                             aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg              >  2:2128961/1‑140 (MQ=255)

                                                                                                                               aggggctactGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc            <  1:1233029‑M1/130‑1 (MQ=255)

                                                                                                                                ggggctactGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAcc           <  1:3828165‑M1/131‑1 (MQ=255)

                                                                                                                                   gctactGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGCAGCTACCGGGGAAGCCGGACCAAc        <  2:3667719‑M1/134‑1 (MQ=255)

                                                                                                                                   gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc        >  1:1408861/1‑140 (MQ=255)

                                                                                                                                   gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCACCTGGGGACTGCGGACCAGCCGGAGCGACAGGAGCTACAGGGGAAGCCGGACCAAc        >  1:225545/1‑140 (MQ=18)

                                                                                                                                    ctactGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCGACTGGGGACGTCGCACCAGCCGTAGCGACAGGAGCTACCGGGGAAGCCTTACCAaca       <  2:694882‑M1/135‑2 (MQ=255)

                                                                                                                                      actGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                   >  1:3906379‑M1/4‑46 (MQ=255)

                                                                                                                                      aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCCCAGGGGCTACTGGCGACGTCGGACCAGCGGGAGCGACAGCGGCTACCGTGGAATCCTTACCAACggg     >  2:928253/1‑140 (MQ=18)

                                                                                                                                      aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCGGGGCAACAGGGGAAGTCGGACCAGCCGTAGCGCCAGGAGCTACCGGGGAATCCTGACCaccacg     >  2:1418899/1‑135 (MQ=17)

CCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGC  >  NZ_CP034943/607558‑607834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.