BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 607646	108 (0.450)	4 (0.020) +ACGGGAGCC	4/230	NT	3.7%	coding (489/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	607683 =	115 (0.470)	4 (0.020) +ACGGGAGCC	4/230	NT	3.7%	coding (526/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 134 total aligned reads displayed.

GAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGG  >  NZ_CP034943/607545‑607822

gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                                            <  1:361856/140‑1 (MQ=255)

gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                                            <  1:1153347/140‑1 (MQ=255)

gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                                            <  1:2294234/140‑1 (MQ=255)

   gCCGGACCAGCCGGGGCCCCGGGCGCCTCAGGGGCTACTGGCGAAGCCGGACCAGCCGGAGCCACAGGAGCTCCCGGCGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                                         <  1:1034162/140‑1 (MQ=17)

     cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCCACCGGAGCGACAGGAg                                                                                                                                       >  1:1662616/1‑140 (MQ=255)

             ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACggga                                                                                                                               >  2:1123606/1‑139 (MQ=255)

             ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGGCCTAGCGGAGCGACAGGAGCTACCggg                                                                                                                               >  1:1586292/1‑140 (MQ=17)

             ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCAGGAGCGACAGGAGCGACAGGGGAAGCCGGACCAACCGGAGCGCCAGGAGCAAcagcg                                                                                                                               >  1:3392722/1‑136 (MQ=17)

                      cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                                               >  1:885984/1‑131 (MQ=255)

                      cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAGGCCGGa                                                                                                                      >  2:1235956/1‑140 (MQ=255)

                      cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                      <  1:4004087/140‑1 (MQ=255)

                      cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGATCGGGGACTCCGGACCAACCGGAGCTACAGGAGCAAACGGGGATGCGGGa                                                                                                                      >  1:622025/1‑140 (MQ=14)

                           gCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                                                 <  2:1636533/140‑1 (MQ=255)

                            ccACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGa                                                                                                                                        <  2:2772481/116‑1 (MQ=255)

                              acaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                              <  1:1273872/140‑1 (MQ=255)

                                aGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                                                                                                            <  2:2245395/140‑1 (MQ=255)

                                   ggCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAAGCCGGACCAGCCGGAGCGa                                                                                                         >  1:2069504/1‑140 (MQ=255)

                                    gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAGCCCGGACCAGCCGGAGctcc                                                                                                        >  2:3950316/1‑137 (MQ=14)

                                      cccTGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACGGGCGAAGCCGGAGCAGCCGGAGCCCCAGGAGCTCCGGGCGACGCAGGAGCTACCGGAGCGACAGGAGCTACCGGCGAACCCGGACCAGCCGGAGCGACAg                                                                                                      <  1:3634389/138‑1 (MQ=14)

                                      caCTGCGGACGCCGGACCCGCCGGCGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                                      <  1:2669656/139‑1 (MQ=14)

                                       ccgggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCTGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                     <  1:3939354/137‑1 (MQ=255)

                                       aCTGGGGAAGCCGGACCAGCCGGGGCGAAAGGACATAGCTGGGAAGCCGGACCACCCGGCGCGACTAGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGGAGCCGGACCAGCCGGcgcgtgggg                                                                                                     >  2:3949107/1‑135 (MQ=11)

                                       aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAACCGGAGCGACCGGAGCGCCCGGGGCAGCCGGACAAACCGGAGCgcccgg                                                                                                     >  2:609040/1‑135 (MQ=11)

                                       aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGCGAAGCCGGACCAGCCGGAGCTACCGGAGCGACCGGCGCGCCCGGAGCAGCCGGAgacgcagc                                                                                                     >  2:3471282/1‑133 (MQ=11)

                                       aCTGGGGAAGCCGGACCAGCCGGAGCGACACGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGTCCGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                     <  1:3939355/140‑1 (MQ=255)

                                       aCTGGCGAAGCCGGACCCGCCGGAGCGACCGGAGCTACCGGGGACGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                     <  1:936746/140‑1 (MQ=14)

                                         cggcccaGCCGGACCCCCCGGACCGACAGGAGCTACCGGGCACGCCGGACCAGCGGGAGCGACAGGCGCTCCCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                                                                   <  2:644663/134‑1 (MQ=14)

                                             gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGAGACGCAGGAACAACCGCAGCGACATGAGCTACAGGGGACTCAGGACCAGCCGGAGCGCCAGGAGCTAc                                                                                               >  1:2773157/1‑140 (MQ=14)

                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGGCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGTAGCTCAAGGGGAAGCCGGACCAGCCGGAGCGACACGAGCTccc                                                                                              >  1:344714/1‑140 (MQ=14)

                                              aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACTGGAGCGAcc                                                                                              >  1:803072/1‑140 (MQ=255)

                                                gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                                                            >  2:2185551/1‑140 (MQ=255)

                                                gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAGCCGGagcgaccggagcgaccgg                                                                                            >  2:2407432/1‑140 (MQ=255)

                                                gCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGAGCAGCCTGAGCGACATCAGCTACCGGGCAAGCCGGACCAACCGGTGCGAGAGGAGCTACCGCGGAAGCAGGACCAGCCGGGGCGACAGGAGCTACCgg                                                                                            >  1:3485701/1‑140 (MQ=14)

                                                 ccGGACCCGCAGGAGCGAGTTGAGCTACCGGGGTTGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                           <  1:3340074/140‑1 (MQ=14)

                                                     aCCCGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGTGGAAGCCCGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                                       <  1:931463/140‑1 (MQ=255)

                                                     aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCAGGACCAGCCGGAGCGACAGGAGCTACAGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGacg                                                                                       >  1:1868117/1‑138 (MQ=14)

                                                          ccGGCGCGACAGGAGCTACCGGCGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                  <  1:2505022/140‑1 (MQ=255)

                                                          ccGGAGCGCCTGGAGCCTCGGGGGACCCCCGACCAGACGGAGCCACAGGAGCTCACGGTGAACCCGGACCAACCGGAGCCACAGGAGCTACAGGCCAAGCGGGACCAGCGGGAGCCACAGGAGCTACCGGGGAAGCCGGa                                                                                  <  1:1799264/140‑1 (MQ=9)

                                                          ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                  >  1:982882/1‑140 (MQ=255)

                                                          ccGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                  <  1:2795030/140‑1 (MQ=255)

                                                          ccGGAGCCACCGGAGCTCCGGGGGAAGCGGGACCAGCCGGAGCGACAGCAGCTTCCCGCGAATCCGGACCAACCGGAGCGACAGGCGCTACCGGCGAAGCCGGACAAGACGGACCGACAGGAGCTACCGGGGAAGCCGGa                                                                                  <  1:672752/140‑1 (MQ=11)

                                                          ccGCAGCGAGAGGAGCGACGGGGGCTGCCGGAGCTACCGGTGCGACAGGAGCTACCGGCGAACCCGGAGCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                  <  1:1164898/140‑1 (MQ=14)

                                                            ggcgccaCAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAcc                                                                                <  2:944524/134‑1 (MQ=11)

                                                                   cAGGAGCGCCCGGGGACGCCGGACCCGCCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCGGGACCAGCCGTAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                         <  1:3874389/140‑1 (MQ=14)

                                                                   cAGGAGCGACCGGGGACGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa                                                                         <  1:774268/140‑1 (MQ=255)

                                                                           aCCGGGGAAGCCGGCCCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAACCTGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                                 <  2:768044/140‑1 (MQ=255)

                                                                             cGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAAACAGGAACAGCCGGAGCGACAGTAGCAACCGACGAATCCAGACCACACGCAGAGACAGGac                                                               >  1:1026467/1‑139 (MQ=11)

                                                                               ggcaaGCTGGACCACCGGGAGCCCCAGGAGATACGGGCGACCCCGGACCTACCGGCGACCCAGGACCTCCCGGGGATTCCGGACCCCCCGGAGCTACAGGTGCTCCCGGCGAAGCCGGACCAACCGGAGCGACGGGAGcc                                                             <  2:966804/137‑1 (MQ=2)

                                                                               gcccaGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGcc                                                             <  2:2722623/136‑1 (MQ=255)

                                                                                 gacgCCGGACCCGCCGTATCGACAGCCGCGACCGCGGAAGCAGGACCAACCGGAGCTACAGGAGCGCCCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                           <  2:1967000/137‑1 (MQ=14)

                                                                                  caGCCGGACCAGCCGGAGCGACAGCAGCTACCGGGGAAGCCGGGGCCACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                          <  2:1586292/139‑1 (MQ=14)

                                                                                  aaGCCGGACCCGCCGGCGCCAGAGGCGCTACCGGGGAAGCCGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                          <  2:390298/140‑1 (MQ=14)

                                                                                   aGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCCGCCGGACCAACAGGAGCGACAGGAGCGACCGGGGACGCCGTACCAGACTGAGCGTCAGGAGCTCGCGCGCAAGCCGGTCCACCCGGAGCGGCGGGAGCCCCAg                                                         >  1:1960971/1‑140 (MQ=14)

                                                                                   aGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGACTCCGGACCAGCCGGAGCGACAGGAGCTACCGCGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAg                                                         >  1:2962203/1‑140 (MQ=255)

                                                                                    gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCAACCGGGGAAGCCGGCCCAGCCGCAGCGACAGGAGCGCCCGGCGCCGCCGGACAAGCGGGTGCGCCGGGCGCGACAgg                                                        >  2:170225/1‑140 (MQ=11)

                                                                                    gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                                        <  1:1041743/140‑1 (MQ=255)

                                                                                    cccGGACCCCCCGGAGCGCCAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGCGAAGCCGGACCCCCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAgg                                                        <  1:1431403/139‑1 (MQ=14)

                                                                                      cgcaacAGCCGGAGCGACAGGCGCTACCGGTGAACCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                                      <  2:248733/135‑1 (MQ=14)

                                                                                      cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACTCCGGACCAGCCGGAGCGACTGGAGCAACCGGGGCAGCCGGACCAACCGGAGCGACGGGATCCACAggag                                                      >  2:1998197/1‑138 (MQ=14)

                                                                                      cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCACCCGGAGCGCCGGGAGCCACAggcg                                                      >  2:3943661/1‑138 (MQ=255)

                                                                                      cGGACCACCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                                      <  1:3253630/140‑1 (MQ=14)

                                                                                             cccGGAGCCCCAGGCGCTACCGGGCAAGCCGGACCACCCGGAGCGACAGGCGCTACCGCGGAAGCCGGACCAGCCGGAGCGACACGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTgg                                               <  2:1662616/139‑1 (MQ=14)

                                                                                               aggagctaccggggaagccggaccagccggagcgacgggagccaca                                                                                                                                           >  2:3309737‑M2/44‑46 (MQ=255)

                                                                                               aggagctaccggggaagccggaccagccggagcgacgggagccaca                                                                                                                                           <  1:3309737‑M2/3‑1 (MQ=255)

                                                                                                  agccccAGGAGCTCCCGGTGAACCCGGAGCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                                          <  1:2751041/135‑1 (MQ=17)

                                                                                                  aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGTGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                                          >  2:2892494/1‑140 (MQ=255)

                                                                                                  aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGGGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCCACAGGCGCGACTGGGGACg                                          >  2:884393/1‑140 (MQ=255)

                                                                                                  aGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                                          <  1:3684362/140‑1 (MQ=255)

                                                                                                  aGCCACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACg                                          <  1:3707886/140‑1 (MQ=255)

                                                                                                        aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                                                                   <  2:1741196/93‑1 (MQ=37)

                                                                                                        aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                                                                   >  1:1741196/1‑93 (MQ=37)

                                                                                                            gacgccggcccagccggagccaccgccgccACAGCCGCTACCGGGGACGGCGGACCAGCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGc                                <  2:1868117‑M2/110‑1 (MQ=255)

                                                                                                            gCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGc                                <  2:3663399/140‑1 (MQ=255)

                                                                                                             cgtccGGGGCCGCCGGTCCAACCGGTGCTACAGGTGCTTCCGGGGAAGCGGGACCCCCGGGAGCGACAGGAGCTAGCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGcc                               <  2:737555/137‑1 (MQ=18)

                                                                                                               actggggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGCCCAGCCGGAGCGACGGGAGCCACCGGGGCGACGGGGGACGCCGGAGCCGCCgg                             >  2:656548/4‑140 (MQ=11)

                                                                                                               accgcctaaGCCGGACCCACCGGAGCGGCGGGAGCGACGTGGTATCCCGGAGCCTCGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                             <  1:3579076/133‑1 (MQ=17)

                                                                                                               aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                           <  1:2675495/110‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                             >  2:2227877/1‑140 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                             <  1:2227877/140‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACAAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACACCAGCTACCGGGGAAGCAGGACCAACCGGAGCGACGGGAGCCACAGGCGCAACGTGGGACGTCGGACCAGCCga                             >  2:1804949/1‑139 (MQ=17)

                                                                                                                ccGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCTGAGCGACCGGGGCAGCAGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACGGGGGACGTAGGACCAGCCGGa                            >  2:1249760/1‑140 (MQ=18)

                                                                                                                 cgcaccagcgggagcgacgggagcgACAGGCGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAg                           <  2:72225‑M2/115‑1 (MQ=255)

                                                                                                                  ggggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                                 <  1:3924948/101‑1 (MQ=35)

                                                                                                                  ggggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                                 >  2:1926187/1‑101 (MQ=35)

                                                                                                                     gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCAACCGGCGACGCCGGCCCACCCGGAGCGCCGGGAGCCACAGCCGCGACGGGGGACGTCGGACCAGCCGGAGCgcc                       >  2:3132731/1‑138 (MQ=17)

                                                                                                                     gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                <  1:1677780/51‑1 (MQ=35)

                                                                                                                     gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                >  2:1677780/1‑51 (MQ=35)

                                                                                                                        gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg                    >  2:735465/1‑140 (MQ=255)

                                                                                                                        gCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGAACAACCGGAGCTAGGGTAGCCACAGGGGGTACGGGGGACCTCGGACCGGCCTGAGCGACAgg                    >  2:803670/1‑140 (MQ=17)

                                                                                                                         ccggagcgaccggagcgaCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                           <  1:1610076/68‑1 (MQ=255)

                                                                                                                                 aCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                                                 <  2:3842468/38‑1 (MQ=33)

                                                                                                                                 aCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCCCAGGCGCGACGGGCGACGGCGGACCAGCCGCAGCGCCAGCAGCTAGCgg           >  2:1475506/1‑140 (MQ=17)

                                                                                                                                 aCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCgg           >  2:2266564/1‑140 (MQ=255)

                                                                                                                                 aCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGCGCGACTGGCGCCGGCGGACCAGCCGGAGCGGCAGGAGCGACCgt           >  2:1299282/1‑139 (MQ=18)

                                                                                                                                      cgCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGCCGGGAGCCACAGGGGCTCCTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg      <  1:1932502/139‑1 (MQ=255)

                                                                                                                                      aGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGTGAACCAGGACCAACCGCAGCGACGGGAGCCACAGGGGCTACTCGGGAAGTCGGAGCAGCCGGAGCGCCAGGAGGTCCCggggccg      >  1:97608/1‑137 (MQ=18)

                                                                                                                                      aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAACCGCAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg      >  1:1176545/1‑140 (MQ=255)

                                                                                                                                          aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCACCCGCAGCGCCGGGAGCCCCAGGGGCGACTGGGGCCGTCGGACCTGCCGGAGGGACCCGAGCGACCGGGGACGCggg  >  2:1244850/1‑140 (MQ=18)

                                                                                                                                          aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCGGCGCAACAGGCGCCGGCGGAGCTGCCTGAGCGGCATGAGCTCCGGGGGAAGcagc  >  2:1343848/1‑137 (MQ=14)

                                                                                                                                          aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg  >  2:1341913/1‑140 (MQ=255)

GAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGG  >  NZ_CP034943/607545‑607822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.