| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 634,078 | C→G | 9.4% | E565Q (GAA→CAA) | EO946_RS03330 ← | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 634,078 | 0 | C | G | 9.4% | 521.2 / 3.4 | 215 | E565Q (GAA→CAA) | EO946_RS03330 | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (32/144); new base G (20/2); total (69/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.53e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 231 total aligned reads displayed.
ATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCTATA > NZ_CP034943/633941‑634217 | aTGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttcttctt < 2:77777/140‑1 (MQ=255)aTGGTCTTGATAGAGTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttcttctt < 2:3934886/140‑1 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg < 1:1314572/140‑1 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg < 2:1816255/140‑1 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg < 1:1999847/140‑1 (MQ=255) tGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGa < 2:503452/140‑1 (MQ=255) gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTGGTTGTTTTTCAATTCGTGTTGTTTTTAATATTaa > 1:3135961/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtttt > 2:128594/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTCTTTTTATTATTAATATGTACGtttt > 2:3492477/1‑140 (MQ=255) cGGATCAGATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:2324512/140‑1 (MQ=255) cGGATCACATATCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 2:2252715/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:539254/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:3362582/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 2:3603806/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 2:791234/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGGGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:3601018/140‑1 (MQ=255) cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGc < 2:1714303/140‑1 (MQ=255) cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAAGGGTGTGAACAGTGGCTTCAATTTCTTCCATCCAACGGAGTCCTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGc < 2:2036202/140‑1 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTCTTTTTGCATTGTTTTTCTTATTAATATGAAAGTTTTTAGTCAGGCTTAAACGAAGCa > 2:3211071/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTACATTCTTTTTCTTCTTCATATTAACGTTTTGAGTCAGGCTTATACGAAGCa > 2:1956047/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTACATTGTTTTTATTATTAATAATAACGTTTTTATTACGGCTTAACCGAAGCa > 2:2556014/1‑140 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTCCATTGTTTTTCTTCTTCATATGAACGTTTTGAGTGAGGCTTAACCGAATCAg > 2:3656705/1‑140 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCCATTGTTTTTGTTGTTCATATGAACGTTTTTAGTCAGGCTTAAACGAAGCAg > 2:2402528/1‑140 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTCGTTTTGCAGTCTTTTTGTGATTGAGATTCACGGTTTTTGTGAGGCTTAAACGAAGccg > 1:2110180/1‑138 (MQ=255) cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGGTTTTGGATTGTTTTTTGTGGTGATATGGACGGTTTGTTTGAGGGGTAACCGAAGCAggg > 1:35307/1‑139 (MQ=255) ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGCTTTGTTTTTTCAGTGTTTTTTTTCTTAAAATTAACGTTTTGTGTCAGGCTTTAACGAAGCAGGCgg > 1:3772888/1‑139 (MQ=255) ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGGCTTTGTTTTTGCCTTATTTTTATTGTTGATATGTAAGTTTTTAGTGAAGCTTTAACCAAGCAGGCgg > 1:533753/1‑139 (MQ=255) ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGCGGTGGTTTTGGTGGTGATATGAACGTGTTTGTTGAGGGGTAAACGAAGCAggggg > 1:3442522/1‑137 (MQ=255) aCTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGtttttt < 2:2689524/140‑1 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 1:903446/140‑1 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTTAGTCACGCTTAACCGAAGCAGGCGTTTTTTAGGag > 2:1685037/1‑139 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTACATTATTTTTCTTATTAAAATTAAAGTTTTTATTAAGGCTTAAACGAAGCAGGCGTTTTTTAGGAt > 2:1053571/1‑140 (MQ=255) ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTTTTTTTGGATTGTTTTTTTTGTTGATATGAAAGTTTTTTGTCAGGGGTTAACGGAGAAGGGGTTTTTTTGGttttgt > 1:3701442/1‑137 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTGTGTTTTTGGCATATTTTTATTTTTGATATTGACGGTTTGTGTGAGGCTTAAACGAATCACGCGTTTTTTGGGtttgcgg > 1:427601/1‑136 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTTTTTTCCATCTTTTTTTTGTTGATATTAAAGTTTTTGTTGAGGCTTTAAAGAACCAGGCCTTTTTTTGGGttgcgg > 1:310976/1‑136 (MQ=255) tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGGGGTGGTTGGTTTTTCATTGGTTTTTGTCTTGATATGTAAGTTTTTTTTGAGGGGTAAACCGAGAAGGCGGTTTTTTGGAATGCTCTTTCttatttat > 1:2087151/1‑140 (MQ=255) tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCAt < 2:275538/140‑1 (MQ=255) gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCAtt < 1:1053571/140‑1 (MQ=255) gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCAtt < 2:2670459/140‑1 (MQ=255) gAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCAtt < 1:2741792/140‑1 (MQ=255) aGTTGCTTCAATTTCTTCAATCCGACGGAGTAGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTTCTGATTCATTTtct < 1:1007255/140‑1 (MQ=255) aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct < 1:1553051/140‑1 (MQ=255) aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTCTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct < 1:1417794/140‑1 (MQ=255) gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc < 1:2927722/140‑1 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTGTTTTTGCCATGTTTTTCTTGTTGATATGAACGGTTTTGGTCAGGGGTTACCGAAGGAGGCGTTTTTTGGGATTGCGCTTGGTGTTTAATTTTGTcc > 2:621446/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGGTTTCTTTTTGCATTGTTTTTGTTGTTGATATTGACGTTTTTAGTGAGGCTTAACCGAAGCAGGCGTTTTTTGGGCTTACGCTTGCTGATTAAATTTGTcc > 1:814443/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTGTTTTTGTTCTTGATATGTACGTTTTTTGTCAGGCTTTAACGAAGCCGGCGTTTTTTTGGATTACTGGTGCTGATTAAttttgtac > 2:1399985/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTGCATTCTTTTTGTTGTTCATATGTACGTTTTGAGTCAGGCTTTACCGAAGCAGGCGTTTTTTGGGATTGCTCTTGCTGATTAATTTTCTcc > 2:643470/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTTCAGTGTTTTTGGTCTTGATATGTACCTTTTTTGTCATGCTTAACCCAAACAGGCGTTTTTTGGGGTTGCTGTTTCTGATTGATTTTATcc > 2:1496332/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGATGGCGGTCGTTCTTTTTGCAATATTTTTAATATTGAAATAAACCTTTTTATTAAGGGTTAAAGCAAGCAGGCGTTTTTTAGCATTAATCATGAAGATTCAttttatac > 2:473430/1‑136 (MQ=255) cAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGATTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCa < 2:240379/140‑1 (MQ=255) aTTTCTACAAGCCGACGGAGTCGTGGGCGTTCTATCTTTTTCCATTCTTTTTCGTCGTCCTAGGAACGTTTTGAGTCAGGCTTCACCGAACCAGGCGTTTTTTCGGATTCCACGTGCTGATGCATTTTCTCCAATACaac < 1:1739870/140‑2 (MQ=255) tcttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctg < 2:1163106/140‑1 (MQ=255) cttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgc < 2:1537943/140‑1 (MQ=255) cttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgc < 2:203/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:55435/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTGTCTTTTTCCATTCTTGTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:3632926/140‑1 (MQ=255) gtcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCCTCTGAACGTTTTGAGGCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:2723440/139‑1 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:2170557/140‑1 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:2360807/140‑1 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 2:694243/140‑1 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTGTTCTTCTTCATATGACCGTTTTGCGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:3153011/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATCTGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 2:1631583/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTGTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 2:3135961/140‑1 (MQ=255) tCGTTGGCTTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 2:1121993/140‑1 (MQ=255) tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 2:178058/140‑1 (MQ=255) ggCGTTCGTTCTTGTTTCATTCTATTTCTTGTTGAGATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTGGTATTCCTCTTGCTGATTCATTTTCTCCTTTTCAAGCTTCTCTGTTTTTTTCTCCGTataa < 2:3692996/140‑1 (MQ=255) gTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATAAGAACGTTTTTAGTCACGCTTAAACGAAGCAGGCGTTTTTTCGGATTCCTATTGCAGATTAATTTTCTCCAATTAAAGCAGCTCTGTTTTTTTCTACGTAtaataa > 2:3327699/1‑140 (MQ=255) tctttcttTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATc > 2:1478962/1‑140 (MQ=255) tctttcttTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATc > 2:3860903/1‑140 (MQ=255) ctttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCg < 1:936331/140‑1 (MQ=255) ttctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa < 1:1458650/140‑1 (MQ=255) ttctttTTCCATTCTTTTTCTTCTTCATATGAACGATTTGAGTCAGGCTGAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTa < 2:1923870/140‑1 (MQ=255) tctttTTCCATTCTTTTTCTTATTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTATTCATGATTCATTATCTCCAATTAAACCTGCTCTTTTTTTTTCTCCGTATAATAATCTTaa > 2:3446477/1‑140 (MQ=255) tctttTTCCATTCTTTTTCGTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCGTGCGGATGCATTTTCTCCAATTCAAGCTGCTCTGTTGTTTTGTCCGTCTACTAATCGtca > 2:1074699/1‑138 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 1:2522389/140‑1 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:2933446/140‑1 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:3044686/140‑1 (MQ=255) ctttTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATACATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAAt < 2:214374/140‑1 (MQ=255) tCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTccc < 1:2286859/140‑1 (MQ=255) aTTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGa < 2:3822177/140‑1 (MQ=255) ttCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGAt < 1:3931077/140‑1 (MQ=255) ttCTTTTTCGTCTTCATCTGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGAt < 1:3930058/140‑1 (MQ=255) tatttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:3251384/138‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:2228953/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:2511590/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:1496332/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:2465344/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:2772303/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 1:2628985/140‑1 (MQ=255) tCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATa < 2:2217288/140‑1 (MQ=255) tttttCTTCTTCCTATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 2:2593999/140‑1 (MQ=255) tttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:128594/140‑1 (MQ=255) tttttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 2:1443787/140‑1 (MQ=255) tatttCTGCGTCATATGAACGTTTTGAGTCCGGGTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCGTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATAct < 1:2394262/138‑1 (MQ=255) tttCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATActct < 2:2374104/140‑1 (MQ=255) ttcttcttaTTATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCTTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACtctt < 2:3537724/140‑1 (MQ=255) tcttcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCtat < 1:3860903/140‑1 (MQ=255) tcttcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCtat < 1:594269/140‑1 (MQ=255) cttcATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtata > 2:874772/1‑109 (MQ=255) | ATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAATAATCGTAATCTCCCAGATACTCTTCTATA > NZ_CP034943/633941‑634217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |