| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,743,439 | G→T | 5.7% | L167L (CTG→CTT) | cotE → | outer spore coat protein CotE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,743,439 | 0 | G | T | 5.7% | 498.3 / 12.5 | 158 | L167L (CTG→CTT) | cotE | outer spore coat protein CotE |
| Reads supporting (aligned to +/- strand): ref base G (56/93); new base T (5/4); total (61/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
GAAATAAAATTGTTGTTCAGGCAGAAAGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGTTATAATGAAGGTTG > NZ_CP034943/1743303‑1743578 | gAAATAAAATTGTTGTTCAGGCAGAAAGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTCGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGaa < 2:1146370/140‑1 (MQ=255)gAAATAAAATTGTTGTTCAGGCAGAAAGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGaa < 2:1259591/140‑1 (MQ=255)gAAATAAAATTGTTGTTCAGGCAGAAAGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGaa < 2:1146358/140‑1 (MQ=255) ttgttCAGGCAGAATGGGAGTTTTTAGCGGAAGGGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAGGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCg > 1:3598154/1‑140 (MQ=255) ttgttCAGGCAGAACGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCg < 1:1000024/140‑1 (MQ=255) ttgttCAGGCAGAAAGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCg > 1:7673/1‑140 (MQ=255) ttgttCAGGCAGAAAGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCg < 1:1689538/140‑1 (MQ=255) ttCAGGCAGAAAGGGAGTTTTTAGCGGAAGTGGTAGGATAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGaa > 1:2034575/1‑140 (MQ=255) ggCAGAAAGGGAGTTTTTAGCGGACGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAAtttt < 2:2764841/140‑1 (MQ=255) aGGGAGTTTTTAGCGGTAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAgg < 1:2379325/140‑1 (MQ=255) aGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAgg < 1:1024921/140‑1 (MQ=255) aGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAgg < 2:12090/140‑1 (MQ=255) aGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAgg < 1:524589/140‑1 (MQ=255) aGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAgg < 1:1652598/140‑1 (MQ=255) aGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCGTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAgg < 1:823658/140‑1 (MQ=255) tAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTgaa < 1:2251248/140‑1 (MQ=255) tAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTgaa < 1:1695526/140‑1 (MQ=255) gAAGTGGTAGGAGAAACAAAGGTAGGGGTTGAGTTCAATCCTGATGGGGAAGAGGACGACGAAGAAGATTGGGACGATGAGCTTGTTGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTCGGAGATCCTGAAGAATa < 2:3682838/140‑1 (MQ=255) ggTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGACGACGAAGAAGCTGGGGAAGCTGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATaaaaaa < 1:210849/140‑1 (MQ=255) ggTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATaaaaaa < 2:3790598/140‑1 (MQ=255) ggTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATaaaaaa < 2:606603/140‑1 (MQ=255) ggTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATaaaaaa < 2:232182/140‑1 (MQ=255) ggTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATaaaaaa < 2:1715768/140‑1 (MQ=255) ggTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCGGGAAGACATCACCCCGGAATTTTTAGTAGGAGATCCTGAAGAATaaaaaa < 1:1293277/140‑1 (MQ=255) gTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAg > 2:16134/1‑140 (MQ=255) tAGGAGAAACAAAGGTCGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAgg < 1:354323/140‑1 (MQ=255) ggAGAAACAACGGTAGTGGTTGAGGTAAATCCTGATTGGGAAGCGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGCACAGCTGGACGACATCAACCCGGAATTTTTAGGAGGAGATCCTGAAGAAGCAAAAAGGGa < 2:386187/140‑1 (MQ=255) ggAGAAACAAAGGTCGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGATTAAAAAAGGGa < 2:385272/140‑1 (MQ=255) ggAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAGGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGa < 2:3598154/140‑1 (MQ=255) ggAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTCGGAGATCCTGAAGAATAAAAAAGGGa < 1:1607597/140‑1 (MQ=255) ggAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGa < 2:1740946/140‑1 (MQ=255) ggAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGa < 2:2077888/140‑1 (MQ=255) ggAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGa < 2:2914106/140‑1 (MQ=255) ggAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGa < 2:7673/140‑1 (MQ=255) ggAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGa < 2:3604904/140‑1 (MQ=255) ggAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGa < 2:373174/140‑1 (MQ=255) agaAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACt < 2:2273021/140‑1 (MQ=255) gaAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTa < 1:2460701/140‑1 (MQ=255) aaaCAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAg > 2:741747/1‑140 (MQ=255) aaaCAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAg > 2:2851869/1‑140 (MQ=255) aaGGTCGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGTGAAGATGAGCTTGATGAAGAGCTGGAAGCCATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGgag < 2:1970685/140‑1 (MQ=255) gttgTGGTTGAGTTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACa < 1:3039503/137‑1 (MQ=255) gTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACa < 1:427166/140‑1 (MQ=255) aGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGt < 1:2502347/140‑1 (MQ=255) aGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGt < 1:3813439/140‑1 (MQ=255) gttgTTGAGGTCAATCCTGACTGGGAAGAGGATGACGAGGAAGATTGGGAAGATGAGCTTGATGAAGAGCTTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTa > 2:415303/4‑140 (MQ=255) gTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTa > 2:2973981/1‑140 (MQ=255) gAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCa > 2:1124411/1‑140 (MQ=255) aGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCaa > 1:1292892/1‑140 (MQ=255) aGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCaa > 2:2778932/1‑140 (MQ=255) aGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCaa > 2:1244606/1‑140 (MQ=255) aGGTCAATCCTGACTGGGAAGAGGATGACGAGGAAGATTGGGAAGATGAGCTTGATGAAGAGCTTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCaa > 1:2225945/1‑140 (MQ=255) ggTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAg > 1:1765415/1‑140 (MQ=255) ggTCAATCCTGATGGGGAAGAGGAAGACGAAGACGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTGTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAg > 2:1167636/1‑140 (MQ=255) gTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGt < 2:2584757/140‑1 (MQ=255) gTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGt < 2:642568/140‑1 (MQ=255) cAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGtct < 1:1960629/140‑1 (MQ=255) cAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGtct < 2:3221318/140‑1 (MQ=255) cAATCCTGAGTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGtct < 2:3223498/140‑1 (MQ=255) cAAGCCTGATTGGGACGAGGAAGACCAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGtct < 1:2826548/140‑1 (MQ=255) aaTCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGtctc > 1:758409/1‑140 (MQ=255) aTCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTctct > 2:840245/1‑140 (MQ=255) aTCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTctct > 2:2050207/1‑140 (MQ=255) aTCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTctct > 1:2490330/1‑140 (MQ=255) tCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAATCGACTAGGGGAGACAGTACACCCAAGTCTCtt > 2:2534642/1‑140 (MQ=255) tCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGt < 2:3487140/125‑1 (MQ=255) tCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGt > 1:3487140/1‑125 (MQ=255) cTGATTGGGAAGAGGAAGACGAAGAAGATTGTGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCtttt < 2:1612199/140‑1 (MQ=255) aTTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTCGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTta < 1:371143/140‑1 (MQ=255) aTTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTta > 2:3073771/1‑140 (MQ=255) tGGTAAGAGGACCACGAAGACGTTTGGGAAGCTCAGCTTGATGAACAGCTGCAAGACAGAAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTtata < 1:3304966/140‑1 (MQ=255) gggAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTatat < 2:2024120/140‑1 (MQ=255) gaagaggacgaCGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGAGTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTg > 1:657143/1‑140 (MQ=255) gaagaggaagaCGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATAAACCCGGAATGTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTg > 1:1175/1‑140 (MQ=255) aagaggaagaCGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGa > 2:3028314/1‑140 (MQ=255) aggaagaCGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAgg < 2:3146336/102‑1 (MQ=255) aggaagaCGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAgg > 1:2521664/1‑102 (MQ=255) aggaagaCGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAgg > 1:3146336/1‑102 (MQ=255) aggaagaCGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAgg < 2:2521664/102‑1 (MQ=255) gaagaCGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGTAGATCCTGAAGAATAAAAAAGGGACTAGGCGAGACAGTACCCCCAAGTCTCTTTTTTATATTGatatct < 2:2390477/140‑3 (MQ=255) cGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTc > 1:1568981/1‑140 (MQ=255) aagaatATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCtt < 2:1556861/140‑1 (MQ=255) agaTTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTAt < 2:3084150/140‑1 (MQ=255) ggAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACttt > 1:1133978/1‑140 (MQ=255) ggAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACttt > 1:3068198/1‑140 (MQ=255) aGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTg > 2:1501312/1‑140 (MQ=255) cctGAGCTTGATTAAGATCTTTAAGACATCAACCCCGAATTTTTAGTAGGACATCCTGAAGAATAAAAAAGGGACTAGGGGAGACATTACCCCCAAGTCTCTTTTTTATATTGATATATAATTCTTTTATCACTTTTTGt < 1:3280087/138‑1 (MQ=255) tGAGCTTGATGAAGAGCTTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGttt > 2:3351221/1‑140 (MQ=255) tGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGttt < 2:1252311/140‑1 (MQ=255) tGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGttt > 2:1863330/1‑140 (MQ=255) gCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATg < 2:3386380/140‑1 (MQ=255) cTTGATGAAGAGCTTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGt > 1:3896691/1‑140 (MQ=255) ttGATGAAGAGCTTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGtt < 1:3351221/140‑1 (MQ=255) ttGATGAAGAGCTTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGtt < 1:3351780/140‑1 (MQ=255) ttGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGtt < 2:1428563/140‑1 (MQ=255) atgaAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGTtata > 1:967378/1‑140 (MQ=255) tgaAGAGCTGGAAGACATCAACCCGGAATTTGTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCTCTTTTTGTTTATGTTCTaa > 1:953616/1‑140 (MQ=255) aaGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGTTATAATg < 2:1126010/140‑1 (MQ=255) gagCTTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGTTATAATGaa < 1:415303/140‑1 (MQ=255) agCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGTTATAATGAAg > 1:2924438/1‑140 (MQ=255) | GAAATAAAATTGTTGTTCAGGCAGAAAGGGAGTTTTTAGCGGAAGTGGTAGGAGAAACAAAGGTAGTGGTTGAGGTCAATCCTGATTGGGAAGAGGAAGACGAAGAAGATTGGGAAGATGAGCTTGATGAAGAGCTGGAAGACATCAACCCGGAATTTTTAGTAGGAGATCCTGAAGAATAAAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATATATCATTCTTTTATCACTTTTTGTTTATGTTATAATGAAGGTTG > NZ_CP034943/1743303‑1743578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |