| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,729,917 | C→A | 10.3% | K283N (AAG→AAT) | lcfA ← | long‑chain‑fatty‑acid‑‑CoA ligase LcfA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,729,917 | 0 | C | A | 10.3% | 670.5 / 9.8 | 285 | K283N (AAG→AAT) | lcfA | long‑chain‑fatty‑acid‑‑CoA ligase LcfA |
| Reads supporting (aligned to +/- strand): ref base C (76/163); new base A (43/2); total (120/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.28e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 286 total aligned reads displayed.
AGACAGCTTTTAATGGATGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCA > NZ_CP034943/2729780‑2730054 | cTTTTAATGGATGACAGATCATAATGCTGCAATTCGGGGTGATGCACAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGCTGATTTTCAGCGGTTGGAGCGGAGCCAACCTAGgaac > 2:2922653/1‑139 (MQ=255) aTGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTGTCGATTATTTTGAGCGTTTCGAGCGGATCAAACATAGGAACAAGAATCaat > 2:3494498/1‑138 (MQ=255) aTGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGATGATTTTAAGCGTTTAGAGCGGATCAAAATTATGAAGAAGAATAAtt > 2:1319454/1‑140 (MQ=255) aTGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTTTTTTTCGAAGATTTTGATCGTTTGGAGCGGATCAAAAATAGGAAGAAAAATAAtt > 1:421035/1‑140 (MQ=255) aTGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTTTCGATGATTTTCAGCGTTTCGCGCGGATCAAAATTATgaagaagaaaaatt > 1:2504837/1‑135 (MQ=255) tGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCAttt > 2:716158/1‑140 (MQ=255) aCAGATCATCATGCTGCAATTCGGGGTCATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 2:230880/140‑1 (MQ=255) aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:874970/140‑1 (MQ=255) aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:716158/140‑1 (MQ=255) aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:3074280/140‑1 (MQ=255) aCAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 1:283160/140‑1 (MQ=255) aCAGAGCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCg < 2:2261061/140‑1 (MQ=255) aTCATAATGCTGCAATTCGGGGTGATGCACAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTAAGCGTTTCGAGCGGCTCAAACATAGGAAGAAGAATCATTTAGAAGc > 2:2415873/1‑140 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCACAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGcc < 1:637697/140‑1 (MQ=255) tCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGGTTTGGTTGTCGATGATTTTCAGCGGTTCGCGCGGATGAAACGTAGGAAGAAAAATAATTTCGTAGcc > 1:2602552/1‑140 (MQ=255) cATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTAAGCGTTTCGAGCGGATAAAACTTAGGAAGAAGAATCATTTCGAAGCCt > 2:694484/1‑140 (MQ=255) aTAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTTGCGCTGATTTTGAGCGGTTCGAGCGGCAAAAAAATTGTAAGAACAATCAATTAGAAGccga > 2:324561/1‑138 (MQ=255) aTAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTGGATGATTTTAAGCGTTTCGCGCGGATCAAAATTAGGAATAAGAATCATTTAGAAGccga > 2:1163233/1‑138 (MQ=255) tgctgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTTTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGGTTTTGGTTTATTTTCATCGGTTCGATCGGCTACAACATAGGAATAAAAATAATTTGGCAGACTAGgtt > 1:2165022/1‑140 (MQ=255) tgcAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAAt > 2:2637701/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTGGATTATTTTGAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATAATTTCGAAGCCTAGTTTAATCg > 1:815808/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGATGATTTTGAGCGGTTGGAGCGGATCAAAATTATGAAGAAGAATCATTTAGAAGCCGAGTTTaaaag > 1:3098926/1‑137 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTGGAGCGGGTAAAACTTATGAACAAGAATAAATTAGAAGCCAAGTTTAAtag > 2:1272795/1‑138 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTAGAAGCCTAGTTTAATCg > 2:3304279/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATAATTTGGAATCCTAGTTTAATCg > 2:1069721/1‑140 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGACCGGATCAAAATTAGGAATAAGAAACAATTCGAAGCCTAGTTTAAtag > 2:1916175/1‑138 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTGTGGTTTATTTTGAGCGTTTGGAGCGGATACAACGTATGAAGAAGAATAATTTAGAAGCCTAGTTTAAtag > 1:3874809/1‑138 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTGTGGATGATTTTAATCGTTTAGATCGGGTCAAAACTAGGAACAAAAAAAATTTCGAAGCCTTGTTTAAtag > 1:778754/1‑138 (MQ=255) cAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGGTTGTGTTTTTGGCTGATTTTGAGCGTTTGGAGCGGGTCAAAATTAGGAAGAAGAAACATTTAGAAGCCTAGTTTaaaag > 1:1393377/1‑137 (MQ=255) aTTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGaa < 1:2396065/140‑1 (MQ=255) aTTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGaa < 2:627314/140‑1 (MQ=255) ttCGGGGTGATGCACAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGaat < 2:3139347/140‑1 (MQ=255) cGGGGTGATGCAAAAGGCCAATGTCAAGTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGGTTTTCGATGTTTTTCAGCGTTTCGTGCGGATCCAAAGTAGGACGAAGAATCATTTAGTATCCGAGGTTAATCGaataa > 1:1842924/1‑140 (MQ=255) cGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGaataa < 1:1713344/140‑1 (MQ=255) gggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAAtt < 1:949026/140‑1 (MQ=255) gggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTGTTTGTTTGTGGATTATTTTTAGCGTTTAGAGCCGATCAAACATAGGAAGAAGAATAATTTAGAAGCCGAGTTTAATCGaataaat > 1:1122369/1‑138 (MQ=255) ggTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTTTTTTTCGATGATTTTCAGCGTTTAGAGCGGATCAAACTTTTGAAGAAGAATAATTTAGAAGCCTAGTTTAATCGAATAAtta > 2:2528181/1‑139 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 1:1758693/140‑1 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 1:1202209/140‑1 (MQ=255) cAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGt < 1:1163233/140‑1 (MQ=255) aTTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTGGATGATTTTAAGCGTTTCGAGCGGATAAAACATAGGAAGAAGAATAAATTATAATCCAACTTTAATAGCAAAAATAATCAATGCCGTCAGTGCgaaaac > 1:2719336/1‑135 (MQ=255) aTTGTCGGTGCACCCGGAAAGAGAGTCGGGTTTTGTTTTTGGAGGATTTTCAGCCTTTCGAGCGGATCAAACATAGGAACAACAATAATTTAGAATCCGAGTTTAATAGAATAAATAAACACTGCCCTCACTACGtataa > 1:3512163/1‑139 (MQ=255) tCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGAATATTTTCACCGTTTGGAGCGGATAAAAAGTAGGAAGAAGAAACATTTAGAAGCCTAGTTTAATCGAAAAAATCATAAATGCCGTCAGTCCGTATACGTGa > 2:536585/1‑140 (MQ=255) cGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAAAGTAGGAACAAGAATCAATTAGAAGCCTAGTTTAATCGAAAAATTCATCACATCCGTCAGTCCGTATAAGTGaa > 2:81693/1‑140 (MQ=255) ggTGCACCCGGAAAGAGAGTCGGTTTTTGTTTTTCGATTATTTTAAGCGGTTAGAGCGGATCAAAATTAGGAACAAGAATAATTTAGAAGCCTAGTTTAATCGAAAAATTCAACACAGCCCTCACTGCGTATACGTGaaa > 2:1568696/1‑140 (MQ=255) gCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGaaaaaa < 1:1438656/140‑1 (MQ=255) gCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGaaaaaa < 1:3674647/140‑1 (MQ=255) cACCCGGAAAGAGAGTCGGTTTTTTTTTGTCGATGATTTTCAGCGGTTCGAGCGGATCAAACATATGAAGAAGAATCATTTCGAAGCCGAGGTTAATCCAAAAATTCATAACATCCGTCAGTCCGTATACGTGaaaaaaa > 2:2034945/1‑139 (MQ=255) cGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTAAGCGTTTCGAGCGGATGAAACTTAGGAAGAATTATCATTTCGAAGCGTGGTTTAATCGAATAATTCATCACTGCCGGCAGTACGTATACGTGAAAAAACGGGa > 2:2837540/1‑140 (MQ=255) gtacgatagTCGGTTTTTGTGTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACg < 1:2075048/133‑1 (MQ=255) gAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACg < 2:1630292/140‑1 (MQ=255) gAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACg < 2:3811353/140‑1 (MQ=255) gAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACg < 2:3572256/140‑1 (MQ=255) agagTCGGTTTTTGTTTTTCGATGATTTTAAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATAATTTGGAAGCCTATTTTAATCGAAAAAATAATCAATGCCCTCAGTCCGTATAAGTGAAAAAACGGTACGATTcc > 2:3375809/1‑140 (MQ=255) agagTCGGTTTTTGTTTGTAGATTATTTTCAGCGTTTCGAGCGGATAAAACTTAGGAAGAACAATCATTTCGAAGCCTAGTTTAAACGAATAATTCATCACTGCCGTCAGTCCCTATACGTGAAAAAACGGGAACATGcc > 2:3854819/1‑140 (MQ=255) gagTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGccc < 1:3494498/140‑1 (MQ=255) gagTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGccc < 1:1026968/140‑1 (MQ=255) agTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAATAAAAATTTCGTATCCAATTTTAATCGAATAATTAATCACTTCCGGCAGTCCCTATACGTTAAAAAAAGGGACGATGCCCa > 2:2701910/1‑140 (MQ=255) tCGGTTTTTGTTTTTCGATGATTTTGAGCGTTTCGAGCGGATCAAACTTTGGCAGAAAAAAAATTTCGAAGCCTAGGTTAATCGCATAAATAAACACATCCGTCAGTCCCTATAACTGTAAAAAAAGGACGAttaccacc > 2:2280859/1‑133 (MQ=255) tttgtCGATGATTTTCAGCGTTTCGAGCGGATCAATCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAg < 2:918494/140‑1 (MQ=255) tctatgatTTTCAGCGTTTCGAGCGGATCAAAATTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:3344926/137‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 2:1179099/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:244214/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:666157/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:2657067/140‑1 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc > 1:1519989/1‑140 (MQ=255) tCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:2236697/140‑1 (MQ=255) tCGAGGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTACGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGcccc < 1:2848544/140‑1 (MQ=255) gatTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCccttcct < 2:40824/140‑1 (MQ=255) tttCAGCGTTTCGAGCGGATCAAACTTAGGAAGACGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 1:2922653/140‑1 (MQ=255) tttCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGACTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 1:2133241/140‑1 (MQ=255) tttCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 1:3955503/140‑1 (MQ=255) tttCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTca < 2:152271/140‑1 (MQ=255) tCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTcaca < 2:432653/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 2:446846/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 1:2415873/140‑1 (MQ=255) gCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCg < 2:1810026/140‑1 (MQ=255) gCGTCTCGAGCCGCTCAAACATAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATACATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCACCACTTTTTCAGCCCCTTCCTTCCCCTCg < 1:1907041/140‑1 (MQ=255) ttCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACa > 1:2528218/1‑140 (MQ=255) gaccGGATCAAACTTACGAAGAAGAATCATTTCGAAGCCTAGTTTAATCTAATAATTCATCACTGCCCACAGTCCGTATACGTGAAAAAACGGGACGAGGCCCAGCACCTTTTCAGCCCCTTCCTTCACATCCTACATcc < 2:2212098/137‑1 (MQ=255) cGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAg < 1:2701910/140‑1 (MQ=255) cGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAg < 1:542750/140‑1 (MQ=255) cGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAg < 1:231075/140‑1 (MQ=255) aTCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCgg > 2:196752/1‑140 (MQ=255) aTCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCgg > 1:336981/1‑140 (MQ=255) cAAACTTAGGAATAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACTATTCCCAGCACTTTTTCAGCACCTTCCTTCACATCGTACATCCAAGCGGAg < 2:273934/140‑1 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 1:3293394/140‑1 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 1:211540/140‑1 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 1:3414506/140‑1 (MQ=255) cAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAg < 1:1374203/140‑1 (MQ=255) aaCTTAGGAAGAAGATTCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAATACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:1713791/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAATCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:3787519/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:1002010/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:1182177/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:857182/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:773877/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:1568696/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:3702686/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 1:440272/140‑1 (MQ=255) aaCTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGca < 2:1458442/140‑1 (MQ=255) | AGACAGCTTTTAATGGATGACAGATCATAATGCTGCAATTCGGGGTGATGCAAAAGGCCAATGTAAATTGTCGGTGCACCCGGAAAGAGAGTCGGTTTTTGTTTGTCGATGATTTTCAGCGTTTCGAGCGGATCAAACTTAGGAAGAAGAATCATTTCGAAGCCTAGTTTAATCGAATAATTCATCACTGCCGTCAGTCCGTATACGTGAAAAAACGGGACGATGCCCAGCACTTTTTCAGCCCCTTCCTTCACATCGTACATCCAAGCGGAGCA > NZ_CP034943/2729780‑2730054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |