BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 607149	476 (1.360)	5 (0.020) +TGCCGGGAGTCATG	4/224	NT	1.2%	intergenic (+515/‑9)	EO946_RS03180/EO946_RS03185	glycosyltransferase/collagen‑like protein
*	?	NZ_CP034943	607794 =	462 (1.320)	5 (0.020) +TGCCGGGAGTCATG	4/224	NT	1.2%	coding (637/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 518 total aligned reads displayed.

TCATGTATATGTTGCTGTTGCGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTAC  >  NZ_CP034943/607011‑607288

tCATGTATATGTTGCTGTTGCGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggacc                                                                                                                                            >  2:3463545/1‑140 (MQ=255)

 cATGTATATGTTGCTGTTGCGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggacca                                                                                                                                           >  1:311728/1‑140 (MQ=255)

  aTGTATATGTTGCTGTTGCGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccac                                                                                                                                          <  1:3774592/140‑1 (MQ=255)

  aTGTATATGTTGCTGTTGCGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccac                                                                                                                                          <  1:2472122/140‑1 (MQ=255)

     tataTGTTGCTGTTGCGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGgaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaag                                                                                                                                       >  1:4827996/1‑140 (MQ=255)

       tatGTTGCTGTTGCGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGAccacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaagga                                                                                                                                     >  1:724906/1‑140 (MQ=255)

       tatGTTGCTGTTGCGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGAccacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaagga                                                                                                                                     >  2:408574/1‑140 (MQ=255)

          gttgctgttgcGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTg                                                                                                                                  >  1:3871571/1‑140 (MQ=255)

          gttgctgttgcGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACAACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACACGCACTg                                                                                                                                  >  1:2778784/1‑140 (MQ=255)

           ttgctgttgcGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGc                                                                                                                                 <  1:3007337/140‑1 (MQ=255)

            tgctgttgcGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGcc                                                                                                                                >  1:2855556/1‑140 (MQ=255)

              ctgttgcGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCgg                                                                                                                              <  2:2795561/140‑1 (MQ=255)

              ctgttgcGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCgg                                                                                                                              >  2:3571198/1‑140 (MQ=255)

              ctgttgcGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCgg                                                                                                                              >  1:1559696/1‑140 (MQ=255)

              ctgttgcGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCgg                                                                                                                              >  2:2156206/1‑140 (MQ=255)

                      tAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATg                                                                                                                      >  2:3305769/1‑140 (MQ=255)

                      tAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATg                                                                                                                      <  1:211934/140‑1 (MQ=255)

                        aGGGGAGTAAGCGGGCCGCAGGGACCACGCGGAGTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATggg                                                                                                                    <  1:4398913/140‑1 (MQ=255)

                        aGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATggg                                                                                                                    <  1:2606488/140‑1 (MQ=255)

                           ggAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGc                                                                                                                 >  2:232844/1‑140 (MQ=255)

                             aGTACGAGGGCCGCAGGGACCACGCGGAGTACGCGGTATCCCAGGCAGTGTGGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTGATGGGAGCca                                                                                                               <  2:1568878/140‑1 (MQ=255)

                             aGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCca                                                                                                               <  1:3432278/140‑1 (MQ=255)

                              gTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCcac                                                                                                              >  1:3496488/1‑140 (MQ=255)

                              gTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCcac                                                                                                              >  1:1358975/1‑140 (MQ=255)

                              gTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCcac                                                                                                              >  2:4210846/1‑140 (MQ=255)

                               tAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCcaca                                                                                                             <  2:4863289/140‑1 (MQ=255)

                                     ggCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCt                                                                                                       >  1:3213203/1‑140 (MQ=255)

                                     ggCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCt                                                                                                       >  2:513370/1‑140 (MQ=255)

                                       ccGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTAc                                                                                                     >  1:4459464/1‑140 (MQ=255)

                                       ccGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTAc                                                                                                     >  2:3041645/1‑140 (MQ=255)

                                       ccGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTAc                                                                                                     >  2:923646/1‑140 (MQ=255)

                                       ccGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTAc                                                                                                     >  1:2379160/1‑140 (MQ=255)

                                           aGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACACGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCggg                                                                                                 <  2:4904856/140‑1 (MQ=255)

                                                 cACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGcc                                                                                           >  2:3221175/1‑140 (MQ=255)

                                                  aCGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCg                                                                                          >  2:1293176/1‑140 (MQ=255)

                                                  aCGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCg                                                                                          >  2:1473240/1‑140 (MQ=255)

                                                    gcgGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGa                                                                                        <  2:5003711/140‑1 (MQ=255)

                                                         ttACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACACGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGACGCCGGACCAGc                                                                                   >  2:5606483/1‑140 (MQ=255)

                                                          tACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                  <  2:1668000/140‑1 (MQ=255)

                                                             gcgGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACCAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCggg                                                                               <  2:2247062/140‑1 (MQ=255)

                                                                 tATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGa                                                                           >  2:375243/1‑140 (MQ=255)

                                                                  aTCCCAGGCAGTGTTGGAGCCACATTACAAAAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCAGGGGAGCCACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGGGCCAc                                                                          >  2:1189872/1‑140 (MQ=38)

                                                                  aTCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCAc                                                                          >  2:77799/1‑140 (MQ=255)

                                                                  aTCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGCACCAGCCggg                                                                               >  1:4884932/1‑135 (MQ=255)

                                                                      cAGGCAGTGTTGGAGCCACAGGAccacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaagga                                                                                                                                     >  2:3822904/1‑77 (MQ=255)

                                                                             tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                               >  1:952563/1‑140 (MQ=255)

                                                                             tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                               >  1:113054/1‑140 (MQ=255)

                                                                             tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                               >  1:5345339/1‑140 (MQ=255)

                                                                             tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                               >  1:4089790/1‑140 (MQ=255)

                                                                             tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                               >  1:2048383/1‑140 (MQ=255)

                                                                             tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                               >  1:4776304/1‑140 (MQ=255)

                                                                             tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                               >  1:2956322/1‑140 (MQ=255)

                                                                             tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                               >  2:4636138/1‑140 (MQ=255)

                                                                             tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                               >  1:3681551/1‑140 (MQ=255)

                                                                              gtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACggg                                                              <  2:5372746/140‑1 (MQ=255)

                                                                              gtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACggg                                                              <  2:1807997/140‑1 (MQ=255)

                                                                                   aGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTa                                                         <  2:114700/140‑1 (MQ=255)

                                                                                     ccACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACt                                                       >  1:5168885/1‑140 (MQ=255)

                                                                                       acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCGACAGGAGCCCCGGGAGCtccggg                                                     >  1:2206391/1‑135 (MQ=255)

                                                                                       acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                     <  1:5743259/140‑1 (MQ=255)

                                                                                       acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                     >  1:904135/1‑140 (MQ=255)

                                                                                       acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                     >  1:4292545/1‑140 (MQ=255)

                                                                                       acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                     >  1:4214628/1‑140 (MQ=255)

                                                                                        caGGACCACAAGGACCACAAGGACCACCCGGACCACAAGGACCACCAGGACCACAAGGACTGCCGGGAGGCATCGGAGCCACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTCCTggg                                                    <  1:2665974/140‑1 (MQ=37)

                                                                                        caGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTggg                                                    <  1:4717678/140‑1 (MQ=255)

                                                                                        caGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTggg                                                    <  1:3925507/140‑1 (MQ=255)

                                                                                            accacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAg                                                <  1:5298505/140‑1 (MQ=255)

                                                                                             ccacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggaCTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACAGGAGCCACGGGCGCTCCGGGTGaacc                                               >  2:2979425/1‑138 (MQ=37)

                                                                                                 caggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTgga                                           <  2:566194/139‑1 (MQ=255)

                                                                                                 aaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTgga                                           <  1:1440836/140‑1 (MQ=255)

                                                                                                 aaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTgga                                           <  1:1714971/140‑1 (MQ=255)

                                                                                                 aaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTgga                                           <  2:2448613/140‑1 (MQ=255)

                                                                                                     accacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCGACGGGAGCAACGGGGGAAGCGggaccgc                                       >  1:622894/1‑138 (MQ=38)

                                                                                                     accacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccag                                       >  2:2584021/1‑140 (MQ=255)

                                                                                                     accacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACGGGGGAAGCTggaccag                                       >  1:4945056/1‑140 (MQ=255)

                                                                                                       cacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTCCTGGGGCAGCTggaccagcc                                     >  1:1638710/1‑140 (MQ=255)

                                                                                                         caaggaccacaaggaccacaaggaccacaaggactgccgggagtcatgggagccacaggagctaccggggaagccggaccagccggggcgacaggagccacgggagccacaggcacaggagcagctgggttatccgaata                                   <  2:4776304‑M1/140‑107 (MQ=255)

                                                                                                          aaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagccgga                                  <  2:3681551/140‑1 (MQ=255)

                                                                                                            ggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGTAAGCTggaccagccggacc                                <  2:2082200/140‑1 (MQ=255)

                                                                                                              agagaccggaccacaaggaccaaatggtgagccgggagtcatgggagcgacaggagctaccggggaagccggaccatccggagcgacaggagccacgggagccacaggcacaggagcagctgggttatccgaatacgggt                              <  2:1909783‑M1/133‑112 (MQ=255)

                                                                                                              accacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagccggaccag                              >  1:4575060/1‑140 (MQ=255)

                                                                                                               ccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagccggaccagc                             >  1:5608085/1‑140 (MQ=255)

                                                                                                                 acaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCCTGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGgaccagccggaccagccg                           >  1:860616/1‑140 (MQ=255)

                                                                                                                   aaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGAcaagccggaccatccgga                         >  1:1047861/1‑140 (MQ=255)

                                                                                                                       accacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGa                     >  1:2329531/1‑140 (MQ=255)

                                                                                                                        ccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGAGCAGCCGGAGCGAc                    >  1:5708404/1‑140 (MQ=255)

                                                                                                                        ccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGAc                    >  2:43592/1‑140 (MQ=255)

                                                                                                                        ccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGAc                    >  1:5533424/1‑140 (MQ=255)

                                                                                                                        ccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACCGGCGCTACAGGGGAAGCGGGACCAGCCGGACCCACAGGAGCGAc                    >  1:3321534/1‑140 (MQ=21)

                                                                                                                                 ccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCCACGGGAGCTAGGGGGGAAGCTGGACAAGCCGTACCAGCGGGAGCGACGGGTGcgag           >  2:2710497/1‑137 (MQ=25)

                                                                                                                                 ccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACCGGAGCCACCGGAGCTAGCGGGGAAACAGGACCAGCCGGACCAGCCGGACCGACGGGAGCCAc           >  1:5409188/1‑140 (MQ=25)

                                                                                                                                 ccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCAc           >  1:5115188/1‑140 (MQ=255)

                                                                                                                                 ccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCGGGACCAGCCGGACCAGCGGGAGCGACGGGAGCCAc           >  1:1836082/1‑140 (MQ=255)

                                                                                                                                 ccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACGGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCAc           >  2:580778/1‑140 (MQ=255)

                                                                                                                                  cacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACAGGGGCAGCAGGACCAGCCGGACCAGCCGCAGCGACGGCAGCCAca          >  2:1049863/1‑139 (MQ=25)

                                                                                                                                      aggaccacccggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAg      <  2:5285635/140‑1 (MQ=255)

                                                                                                                                      aggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAg      <  1:1003149/140‑1 (MQ=255)

                                                                                                                                        gaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCt    <  2:3917315/140‑1 (MQ=255)

                                                                                                                                         accacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGAc                                                                          >  2:4436328/1‑69 (MQ=255)

                                                                                                                                          ccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGCGGAAGCTGCACCAGCCGTACCATCCGAAGCGACGGGAGCGACGGGAGCTAc  >  1:1282212/1‑140 (MQ=25)

TCATGTATATGTTGCTGTTGCGTAAGGGGAGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTAC  >  NZ_CP034943/607011‑607288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.