| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 27,592 | A→C | 7.9% | T391P (ACG→CCG) | dnaX → | DNA polymerase III subunit gamma/tau |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 27,592 | 0 | A | C | 7.9% | 680.7 / 8.9 | 271 | T391P (ACG→CCG) | dnaX | DNA polymerase III subunit gamma/tau |
| Reads supporting (aligned to +/- strand): ref base A (113/125); new base C (2/31); total (115/156) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.18e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 295 total aligned reads displayed.
CCATCCCCGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGACCTGCT > NZ_CP034943/27453‑27731 | ccATCCCCGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAaacaa < 2:4117559/140‑1 (MQ=255) aTCCCCGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACg < 2:3478931/140‑1 (MQ=255) aTCCCCGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACg < 1:1634180/140‑1 (MQ=255) aTCCCCGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACg < 2:3706208/140‑1 (MQ=255) ccccGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCCAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCGCAAAACAACggg > 1:550870/1‑140 (MQ=255) ccccGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACggg > 1:3608726/1‑140 (MQ=255) ccccGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACggg > 2:144137/1‑140 (MQ=255) ccccGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACggg > 2:4222116/1‑140 (MQ=255) ccccGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAAAggg > 2:4452239/1‑140 (MQ=255) ccccGTATCTTTTTTGAAGTGGCAGGGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGAGTTGCCGGATGTCGATATGCTGATGAAAAATATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACggg > 1:1901273/1‑140 (MQ=255) tATCTTTTTTTAAGTGGCAGAGGTGAAGATATGCCAAACGTATCATCAAACAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACCGGCATaa > 1:4204495/1‑140 (MQ=255) tATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGACGTGGAGCGGCTCAAAACAACGGGCATaa > 2:3252190/1‑140 (MQ=255) tATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATaa > 2:378233/1‑140 (MQ=255) tATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATaa > 2:584444/1‑140 (MQ=255) tCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATaaaa > 1:4296642/1‑140 (MQ=255) tCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATaaaa > 1:2441485/1‑140 (MQ=255) tttttGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAagca < 2:3119634/140‑1 (MQ=255) tttttGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAagca < 2:5578999/140‑1 (MQ=255) tttGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACg > 1:5418944/1‑126 (MQ=255) tttGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAagcagc > 1:5489117/1‑140 (MQ=255) gCAGTGTTGAAGATTTGCCAATCGTCTCATCAATCATCATCTGACTTGCAGGAAGTCGATATGCTGATGAAAAAAATTCAGAAGCTATAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGAAGCTGCGGAAAg > 2:2391004/1‑140 (MQ=255) gCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAg < 2:2077315/140‑1 (MQ=255) gCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAg > 1:5291242/1‑140 (MQ=255) aTTTTCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGTAAGTCGATATGCTTATTAAAAAAATTCAGCAGCTCGAGCAGGATGTGGAGCGGCTAAAAACAACGGGCATAAAAGCCGCGGCGGAAAGCCCGAAAAAAGa < 1:2954430/140‑1 (MQ=255) ttGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGaaa > 2:209994/1‑140 (MQ=255) ttGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGaaa > 2:5117470/1‑140 (MQ=255) gCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAAcg < 2:1766378/140‑1 (MQ=255) gCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAAcg < 2:1352497/140‑1 (MQ=255) aaattctaATCAATCAGCAGCTTACTAGCCCGAAGACCATATCCTGATTAAAAAAATTAACCAGCTCTAGCAGGAAGTGGACCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCTAAAAAAGAAAcgccgc < 2:3368158/136‑1 (MQ=255) aaCGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAAcgccgc < 2:2640270/140‑1 (MQ=255) aaCGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAAcgccgc < 2:3844262/140‑1 (MQ=255) cttctcATAAATCAGCAGATGACTTGCCGGAAGTCGATATGATGATTAAAAAAATACAGCAGCTCGAGCAGGAAGTTGAGCGGCTAAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCgt < 1:1145160/138‑1 (MQ=255) cGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATTAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCgt < 2:4666231/140‑1 (MQ=255) cGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATGCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAACCAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCgt < 2:333056/140‑1 (MQ=255) atcaatcaGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCa < 2:4640239/140‑1 (MQ=255) tcaatcaGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGCGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCaa < 2:1546909/140‑1 (MQ=255) tcaatcaGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCaa < 2:5734243/140‑1 (MQ=255) acaatcaGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCaa < 2:5336075/139‑1 (MQ=255) catcaGCCGCTGCCGCGCCGGAAGTCGATATGCTTATTAAAAAAAGTCAGCCGCGCTCGCAGGAAGTGGAGCGGCTCAAAACCACGGCCATAAAAGCAGCGGCGGAAACCCCGAAAAAAGACACGCCGCGTGTGCCAAAg < 1:5061788/139‑1 (MQ=255) tcaGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAggg > 1:4860764/1‑140 (MQ=255) cagcTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTggg < 2:1948018/140‑1 (MQ=255) cgcTGACTTGCCGGAAGTCTATATGCTGATTAAAAAAATTCAGCCGCTCGAGCAGGACGTGGAGCGGCTCAAAACACCGGGCATAAAAGCAGGGGCGGAAAGCCCGAAAAAACAAACGCCGCGTGTGCCAAAGGGTGGGa < 1:1683565/139‑1 (MQ=255) agcTGACTTGCCGTAAGTCGATATGCTGATGAAAAAAATTCAGCCGCTCGAGCAGGAAGTGGCGCGGCTCAAAACACCGGCCATAAACGCCGCGGCGGAACGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGa < 1:5051016/140‑1 (MQ=255) agcTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATGCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGCCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGa < 1:5692901/140‑1 (MQ=255) cTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAg < 2:4326314/140‑1 (MQ=255) cTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAg > 1:1431985/1‑140 (MQ=255) gCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAAtt > 1:1947453/1‑140 (MQ=255) aGTCGATATGCTTATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACACCGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAg < 2:5417746/140‑1 (MQ=255) aGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAATGGTGGGAAGTCCAATTACAAAg < 2:2857315/140‑1 (MQ=255) aGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAg < 2:5642787/140‑1 (MQ=255) aGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAg > 2:2499077/1‑140 (MQ=255) aGTCGAGAGGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAACACAACGGGCATAAAAGCAGCCGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAg < 2:3936936/140‑1 (MQ=255) tcgttttGCTGATGAAATAAAGTCAGCAGCTCGAGCCGGACGTGGAGCGGCTCAAAACAACGGGCATAAACGCAGCGGCTGATAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAgcg < 2:1186114/134‑1 (MQ=255) tCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAgcg < 2:3412642/140‑1 (MQ=255) cTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACg < 2:1662196/54‑1 (MQ=255) gatgaAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCa > 2:2260906/1‑140 (MQ=255) atgaAAAAAATTCAGCAGCTCGAGCTGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCAGCGTGTGCGAAAGGGTGGGAAGTCCAATTACCATGCGCCCGTAGGCAg > 1:1543838/1‑140 (MQ=255) tgaAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGa > 2:658981/1‑140 (MQ=255) gaAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGaa > 1:2846515/1‑140 (MQ=255) ttCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGaa > 1:4923254/1‑140 (MQ=255) ttCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGaa > 1:1979280/1‑140 (MQ=255) ttCAGCAGATCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAACAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGaa < 2:899407/140‑1 (MQ=255) atcTCGAGCATGATGTTGAGCGGATAAAAAAAAGGTGCATAAAAGCCGGGGGGCAAAGCCCGAAAAAAGACACGCCGCGTGTGCCAAAGGGGGGGACGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTg < 1:1769077/138‑1 (MQ=255) cTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTgaa > 1:2107263/1‑140 (MQ=255) cTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTgaa > 1:4729295/1‑140 (MQ=255) tCGAGCCGGAAGTGGCGCGGCTCAAAACACCGGGCATAAAAGCAGCGGCGGAAAGCCCTAAAAAACAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTgaag < 1:2286511/140‑1 (MQ=255) tCGAGCAGGAAGTGGCGCGGCTCAAAACACCGGGAATAAAAGCAGCGGCGGAAAGCCCTAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTgaag < 1:2703173/140‑1 (MQ=255) tCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTgaag < 2:4071767/140‑1 (MQ=255) tCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTgaag < 1:1314866/140‑1 (MQ=255) gcGAGGAGGCCGTGGCGCGGCTCAAAACAAGGCCCATAAACCCAGGGGGGGAATCCCCGAAAAAACAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCAAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTgaag < 1:3522515/139‑1 (MQ=255) acGAGCAGGCAGTGCCGCTGCACAACACAACGGGCATAAACGCCGCGGCGGAAAGCCCTAAAAACCACACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGCCAGAATTCATGAAATTTTgaag < 1:4073081/139‑1 (MQ=255) ggcaGTGGCGCGGCTCAAAACACCGGGCATAAACGCAGCGGCGGAACGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTa < 1:5633730/137‑1 (MQ=255) ggACGTGGAGCGGCTCACACCACCGGGCATAACAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTa < 1:2070407/140‑1 (MQ=255) ggAAGTGGAGCGGCTCAAAACAACGGGCATAAACCCCGCGGCGGAACGCCCGAAAAAAGACACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTa < 1:4421859/140‑1 (MQ=255) ggAAGTGCAGCGGCTAAAAACACCGGCCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTa < 1:584444/140‑1 (MQ=255) aGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACga > 1:2386590/1‑140 (MQ=255) gAGCGGCTCACAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATGTTGAAGGAAGCTACGAGAcc > 1:749885/1‑140 (MQ=255) gAGCGGCTCAAAACACCCGGCATAAACGCAGCGGCGTAAAGCCCGAAAAAACACACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGAcc < 1:2557506/140‑1 (MQ=255) gAGCGGCTCAAAACAACGGGCATAAACGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGAcc < 2:1973748/140‑1 (MQ=255) gAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGAcc > 1:1004874/1‑140 (MQ=255) gAGCGGCTCAAAACAACGGCCATAAAACCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGAcc < 1:5157201/140‑1 (MQ=255) gAGCGGCTAAAAACACCGCCCATAACACCAGCGGCGGAAACCCCCAAAAAAGAAACCCCGCGTGTGCCAAAGGGTGGGAAGTCAAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGAcc < 1:3115166/140‑1 (MQ=255) gAGCGGCTAAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGAcc < 2:5508894/140‑1 (MQ=255) gAGCGGATCAAAACAACGGGCATAAACGCAGCGGCGTAAAGCCCGAAAAAACAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGAcc < 1:951052/140‑1 (MQ=255) gAGCGCCTCAAACCAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAACAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGAcc < 2:71823/140‑1 (MQ=255) ggCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGAc > 1:4144604/1‑135 (MQ=255) gCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATc > 2:5291661/1‑140 (MQ=255) gCTCAAAACAACGGCCATAAACCCAGCGGCGGAAAGCCCCAAAAAACAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATc < 1:846430/140‑1 (MQ=255) cTCAAAACAACGGGCATTAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGGGTGCCAACGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGACTTCCTGAAATTTTGACGGAAGCTACGAGACCGGATCt > 2:4808513/1‑140 (MQ=255) cTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCt > 2:2597258/1‑140 (MQ=255) aaaCACCGGGCATAAAAGCAGCGGCGGAAAGCCAGAAAAAACACACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGAc < 1:3240261/140‑1 (MQ=255) aaaCAACGGGCATAACACCAGCGGCGGAAAGCCCGAAAAAACAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGAc < 2:2425301/140‑1 (MQ=255) aaaCAACGGGCATAAAAGCAGCGGCGTAAAGCCCGAAAAAACACACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGAc < 1:5563832/140‑1 (MQ=255) aaaCAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAACGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGAc < 2:2738757/140‑1 (MQ=255) aaaCAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGAc < 2:4961255/140‑1 (MQ=255) aaaCAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGAc < 2:3717349/140‑1 (MQ=255) aacaacGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGAcc > 2:2158927/1‑140 (MQ=255) acGGGCATAAACGCAGCGGCGCAAAGCCCGAAAAAAGACACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGACCTGCt < 1:4469601/140‑1 (MQ=255) acGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGACCTGCt < 2:54324/140‑1 (MQ=255) acGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCACGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGACCTGCt < 1:3993623/140‑1 (MQ=255) | CCATCCCCGTATCTTTTTTGAAGTGGCAGTGGTGAAGATTTGCCAAACGTCTCATCAATCAGCAGCTGACTTGCCGGAAGTCGATATGCTGATGAAAAAAATTCAGCAGCTCGAGCAGGAAGTGGAGCGGCTCAAAACAACGGGCATAAAAGCAGCGGCGGAAAGCCCGAAAAAAGAAACGCCGCGTGTGCCAAAGGGTGGGAAGTCCAATTACAAAGCGCCCGTAGGCAGAATTCATGAAATTTTGAAGGAAGCTACGAGACCGGATCTTGACCTGCT > NZ_CP034943/27453‑27731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |