| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 549,057 | C→A | 7.1% | F23L (TTC→TTA) | EO946_RS02865 → | PLP‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 549,057 | 0 | C | A | 7.1% | 977.9 / 9.5 | 360 | F23L (TTC→TTA) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base C (174/147); new base A (2/37); total (176/184) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.16e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 362 total aligned reads displayed.
AACTGGAATTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTG > NZ_CP034943/548918‑549195 | aCTGGAAGTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCa < 1:4359546/140‑1 (MQ=255) cTGGAATTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCaa < 1:2467087/140‑1 (MQ=255) tGGAATTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCaaa < 2:2241510/140‑1 (MQ=255) ggAATTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAg < 2:1051513/140‑1 (MQ=255) ggAATTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAg < 2:1603605/140‑1 (MQ=255) ggAATTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTGAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAg < 2:3499170/140‑1 (MQ=255) gAATTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGa > 1:5748318/1‑140 (MQ=255) gAATTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGa > 2:3037880/1‑140 (MQ=255) ttGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGaaaa < 2:2162633/140‑1 (MQ=255) tGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAAc < 1:92021/140‑1 (MQ=255) ggCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACa < 1:4792699/140‑1 (MQ=255) ggCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACa < 1:4668310/140‑1 (MQ=255) ggCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACa < 1:1750254/140‑1 (MQ=255) ggCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACa < 1:783486/140‑1 (MQ=255) ggCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACa < 2:2290354/140‑1 (MQ=255) gCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGACATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACAt > 1:5429/1‑140 (MQ=255) ccTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATg < 1:5046702/140‑1 (MQ=255) aCAGCCAGTTTTCACAAAAAAATGCATACCAGTTTGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGc < 2:2443549/140‑1 (MQ=255) aCAGCCAGTTTTCACAAAAAAATGCATACCAGTTCGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGc > 1:1044005/1‑140 (MQ=255) cAGCCAGTTTTCACAAAAAAATGCATCCCAGTTAGGAGAACAACCCAAATTGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCg < 2:1514119/140‑1 (MQ=255) aGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGt < 1:1154966/140‑1 (MQ=255) ccAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAt > 1:2202322/1‑140 (MQ=255) ccAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAt > 2:5529348/1‑140 (MQ=255) ccAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAt > 1:3881435/1‑140 (MQ=255) tttCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCaaa < 2:801888/140‑1 (MQ=255) ttCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCaaaa > 1:322767/1‑140 (MQ=255) aaaaaTGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATg < 2:524594/140‑1 (MQ=255) aaTGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAg < 1:2139461/140‑1 (MQ=255) aaTGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAg < 2:1158064/140‑1 (MQ=255) gCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTc < 2:2755224/140‑1 (MQ=255) aTACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTccc < 1:2792290/140‑1 (MQ=255) aCCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCtt > 1:1015044/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCACAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 2:279529/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 2:3632289/1‑140 (MQ=255) acaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTccg < 1:4915392/140‑2 (MQ=255) acaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCt < 2:5084081/140‑1 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:4220250/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCGTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:3135543/1‑140 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg > 1:5092918/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:4804661/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:907496/1‑140 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 1:5529348/140‑1 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 2:5626016/140‑1 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 1:2174601/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:4966566/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTTGCGAGTCAGCTTTc > 1:4195160/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTc > 2:3346727/1‑140 (MQ=255) cACGGCTTTTTTGAATAGATATCTGGATATTCCGGTTGATCAGCAGCCTGATCGCTAGTTCAAAGAATACCTGCTGCAGGGGCGTATTCAAACAGGAATGAAGCTCCGTTCCAAAAGCCTCCTGGCGAGTCAGCTTTCCa < 2:1395896/140‑1 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa > 1:181622/1‑140 (MQ=255) aCGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAt > 1:4830419/1‑140 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 1:5627716/1‑140 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 2:4088224/1‑140 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 2:2652852/1‑140 (MQ=255) ttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCaa > 1:4607894/1‑140 (MQ=255) ttttaTACAAATGTGTATATTCCGCTTTATCAGCAGATTTATCGATATTACAAACAAAACATCCATCAGGGGCGTTTTAAAAAAGCAATGACGCGCCCTTCCAAAAGACTCCGGGCGAGTAAGCTTCCCATCAGTCacac < 2:537294/136‑1 (MQ=255) tttaaTATAAATCTGTATATTCCGCTTTATCAGCAGCTTTATCTATATTTCAAAGAAAACATGCATCCGGGGCTTTTTAAAAAAGTAATGAAGCGCCCTTCCAAACCACTCGTGGCGAGTCTGCTTTCCATCAGACAAAc < 2:5451606/137‑1 (MQ=255) ttcaaTCGAAATCTGTATATTCCGCTTTATCAGCCGCTTTATCGCTATTTCAAACAAAACATCCATCCGGGGCTTTTTCAAAAAGGATTGAAGCTCCCTTCCAAAACACGCCTGGCGAGTCAGGTTTCCATCAGTCacac < 2:2115665/137‑1 (MQ=255) ttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGGGTATTAAAAAAGGAATGAAGCTCCCTTCCAAACCACTCCTGGCTTGTCAGCTTTCCATCCGTCAAAc < 2:68668/140‑1 (MQ=255) tAGAAAGCTGGATAGCCCGCTTTATCCGCTGCTTTAGCGCTATTTCAAAGAAAAACGGCATCAGGGGCGTATTAAAAAAGGAATCAAGCCCCCTACCAAACGACTCCTGGCGAGTCAGCTTTCCATAAGGCAAACGACTg < 2:5106588/140‑1 (MQ=255) taaaTCTGGATATTCCGCTTTATCAGAAGCTTTATCGATATTTCAAAGAAAACATGAATCAGGGGCTTTTTAAAAAAGTAATCAAGCGCCCTTCAAAAACACTCCTGGCCAGACAGCTTTCCATCCGTCACACGACTGTa < 2:3230215/139‑1 (MQ=255) aaaaTCTGTATATTACGCTTTATCAGCAGCTTTATCGATATTTCAAACAAAACATCAAACAGGGGCTTATACAAAAAGGAATTAAGCTCCCTTCAAAAACACTCCTGGCGAGTCAGCTTTCCAACAGACAAACGACTGTa < 2:3937742/139‑1 (MQ=255) ttgtatatTCCGATTTATCAGCAGCTTTATCGATATTAAAAACAAAACATGAATCCGGGGCTTATTCAAAAAGTAATGAAGCTCCCTTCCAAAAGACTCCGGGCGAGTAAGCTTTCCATCAGACACACGACTGTAGAACg < 1:2361690/136‑1 (MQ=255) cTGTATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAACAAAACATGCATCAGGGGCGTATTAAAAAAGTAATTAAGCGCCCTTCCAAACCACTCCGGGCGAGTCAGCTTTCCAACAGTCAAACGACTGTAGAACg < 2:4963277/140‑1 (MQ=255) cTGTATATTCCGCTTTATCAGCAGATTTATCGATATTTCACATAAAACATGCATCGGGGGCGTATTCAAAAAGCAATCACGCTCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCAGACAAACGACTGTAGAACg < 1:720507/140‑1 (MQ=255) cTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATACAAAAAGGAATGAAGCTCCCTCCCAAACGACCCCTGGCGAGTCAGCTTGCCATCCGTCAAACGACTGTAGAACg < 2:4349322/140‑1 (MQ=255) tgATATTCCTCTTTACACTAAGATTTATCTATATTAAAAATAAAACTTTATTCAGGTGCTTATAAAAAATGTAATGAACCTCCGTACCAAAAGCCGCGTGCCTAGTCAGCTTTACACCAGTAAAACGACTGTAGAACGTg < 2:1771758/139‑1 (MQ=255) ggATATTCCGCTTTATCAGCAGATTTAGCGCTATTACAAAGAAAACAGGCATCAGGGGCGTATAAAAAAAGGAATGAAGCTCCCTACCAAAACACTCCGGGCTAGTCAGCTTTCCAACAGTCACACGACTGTAGAACGTg < 2:1565904/140‑1 (MQ=255) gATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc > 1:1377880/1‑140 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 1:840499/1‑140 (MQ=255) ctttttATCAGCCGCTTTATCGATATTTCAAATAAAACAGGCATCAGGGGCTTATTCAAAATGCATTGAAGCTCCCTTCAAAACGACTCCTGGCGTGTCAGCTTTCCAACAGTCACACGACTGTAGAACGTGCCTATGaa < 1:2652852/137‑1 (MQ=255) cGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGaa > 1:3596814/1‑140 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 1:5158443/1‑140 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 1:2882313/1‑140 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 2:4143112/1‑140 (MQ=255) aTCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCtt > 1:518748/1‑140 (MQ=255) tCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACGCCTGGCGAGTCAGCTGTCCATCAGTCAAACGACTGTAGAACGTGCCTCTGTACAGCTtg > 2:340492/1‑140 (MQ=255) tCAGCAGCTTTATCGCTATTTCAAAGAAAACATCCATCAGGGGCTTATAAAAAAAGGAATGAAGCCCCCTTCCAAAAGACTCCTGGCGAGTCAGGTTTCCACCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:732713/140‑1 (MQ=255) gcagcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtgctg > 2:4568140/1‑140 (MQ=255) gcagcTTTACCGCTATTTCAACGAAAACAGGAATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCACAAGACGCCTGGCGAGTCAGCTTGCCCTCAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTtgctg < 2:4757031/140‑1 (MQ=255) agcTTTATCGCTTTTTAAAACAAAACAGCCATCAGGGGCGTATACAAAACGGAATGAAGCTCCTTTCCAAAACACGCCTGGCGAGTCAGCTTTCCAACAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3993172/140‑1 (MQ=255) agcTTTATCGCTATTTCAAAGAAAACAGGCATCCGGGGCGTATAAAAAAAGGAATGAAGCTCCCTACCAAACGACGCCTGGCGAGTCAGCTTTCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:5489757/140‑1 (MQ=255) agcTTTATCGATATTTCAAAGAAAACATGCATCCGGGGCGTATTCAAAAAGGAATGAAGCTCCCTGCCAAACGACGCCTGGCGAGGCAGCTTACCACCCGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1736030/140‑1 (MQ=255) agcTTTATCGATATTTAAAACAAAACATGCATCAGGGGCTTATAAAAAAAGCAATCAAGCTCCCTACAAAAACACACCTGGCGAGTCAGCTTTCCAACAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:4309229/140‑1 (MQ=255) agcTTTACCGCTATTTCAAACAAAACAGGCATCCGGGGCTTATTCAAAAAGGAAGCACGCGCCCTTCCAACACCCCCCGGGCGAGTCCGCTGACCACCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3093419/140‑1 (MQ=255) agatttATCGCTATTTAAAACAAAAAATGCATCCGGGGCGTATTCAAAAAGGATTGAAGCTCCCTTCCAAAAGCCGCCTGGCGATTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:3615135/137‑1 (MQ=255) ttttATCGATATTCAAAACAAAACATGCACCTGGGGCTTATTAAAAAAGGAATGAAGCTCCCTACCAAAAGCCTCCTGGCGAGTCAGCTTTCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:181622/139‑1 (MQ=255) cTTTTTCGCTATTTAAAAGAAAACATGAATCTGGGGCGTATTCAAAAAGGAATCACGCTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTTCCATCAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:3752461/140‑1 (MQ=255) cTTTATCGCTATTTCAAATAAAACATGCATCCGGGGCTTTTTCAAAAAGTAATGAAGCTCCCTTCCAAACGACCCCTGGCGAGTCAGCTTCCCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:4566260/140‑1 (MQ=255) cTTTATCGCTATTTAAAAGAAAACATGCATCCGGGGCTTATTAAAAAAGCAATGAAGCTCCCTTCCAAAACCCTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:4088224/140‑1 (MQ=255) cTTTATCGCTATTACAAACAAAACAGGCACCCGGGGCTTATAAAAAAACCAATGACGCTCCCTTCCAAACCAGGCCGGGCTAGTCAGCTTTCCAACCCACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:1939282/140‑1 (MQ=255) cTTTATCGATATTTAAAACAAAACATGCAACAGGGGCTTATTCAAAAAGGAATGACGCTCCCTTCCAAACGACTCCGGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:472358/140‑1 (MQ=255) cTTTACCGATATTTAAAAGAAAACATGCATCCGGGGCGTTTTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTACCATCCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2858797/140‑1 (MQ=255) atttAACGCTATTTCAAATAAAACATCCATCCGGGGCTTATAAAAAAAGGAATGAAGCTCCCTTCAACACCACTCCTGCCCAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:3346727/139‑1 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg > 1:1727447/1‑140 (MQ=255) tCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa > 2:5182020/1‑89 (MQ=255) ccgatATTTCAAACAAAACAGGCAACCGGGGCGTATACAAAAAGTAATCACGCTCCCTTCCAAACGACCCCTGGCGTGTCCGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 1:5321662/136‑1 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 1:1972036/86‑1 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc > 2:1972036/1‑86 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:4405358/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTACCTTACAAAAGACTCCTGGCGAGTCAGCTTTCAATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGCGCTATATc > 2:3863970/1‑140 (MQ=255) | AACTGGAATTGGCCTTTTATAAACAGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTG > NZ_CP034943/548918‑549195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |