| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 549,119 | T→G | 8.8% | L44R (CTG→CGG) | EO946_RS02865 → | PLP‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 549,119 | 0 | T | G | 8.8% | 877.9 / 15.8 | 357 | L44R (CTG→CGG) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (181/129); new base G (2/45); total (183/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.71e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 358 total aligned reads displayed.
ACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAAT > NZ_CP034943/548980‑549257 | caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:104996/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:4309229/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 1:1749098/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 1:4569110/1‑140 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg > 1:5092918/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 1:5120364/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:5363364/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:2507069/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:4566260/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:4804661/1‑140 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 2:3163569/140‑1 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 2:5626016/140‑1 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 1:3439316/140‑1 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 2:1500412/140‑1 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 2:3924160/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt > 1:1592783/1‑133 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:4966566/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTTGCGAGTCAGCTTTc > 1:4195160/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTc > 2:3346727/1‑140 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCATCTTTCCa > 1:5494504/1‑140 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa > 1:181622/1‑140 (MQ=255) aCGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAt > 1:1361127/1‑140 (MQ=255) aCGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAt > 1:4830419/1‑140 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 2:754816/140‑1 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGAATTCAAAAAGGACTGAAGCTCCCTTCCAAAAGACTCCTGCCGAGTCAGCTTTCCATc > 1:2414529/1‑140 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 2:2652852/1‑140 (MQ=255) ttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCaa > 1:4607894/1‑140 (MQ=255) ttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGGGTATTAAAAAAGGAATGAAGCTCCCTTCCAAACCACTCCTGGCTTGTCAGCTTTCCATCCGTCAAAc < 2:68668/140‑1 (MQ=255) tAGAAAGCTGGATAGCCCGCTTTATCCGCTGCTTTAGCGCTATTTCAAAGAAAAACGGCATCAGGGGCGTATTAAAAAAGGAATCAAGCCCCCTACCAAACGACTCCTGGCGAGTCAGCTTTCCATAAGGCAAACGACTg < 2:5106588/140‑1 (MQ=255) gtgtatatTCCGATTTATCAGCAGCTTTATCGATATTTCAAACAAAACATCCATCAGGGGCGTATTCAAAAAGTAATGCAGCTCCCTTCCAAAACACTCCTGGCGATTCAGCTTTCAATCAGTCAAACGACTGTAGAACg < 2:2155548/136‑1 (MQ=255) cgggATATTCCGCTTTATCAGCAGCTTTATCGATATTTCAAACAAAACAGGCATCAGGGGCGTATTAAAAAAGTAATGACGCTCCCTTCCAAACCACACCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACg < 2:3485629/138‑1 (MQ=255) cTGTATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAACAAAACATGCATCAGGGGCGTATTAAAAAAGTAATTAAGCGCCCTTCCAAACCACTCCGGGCGAGTCAGCTTTCCAACAGTCAAACGACTGTAGAACg < 2:4963277/140‑1 (MQ=255) cTGTATATTCCGCTTTATCAGCAGATTTATCGATATTTCACATAAAACATGCATCGGGGGCGTATTCAAAAAGCAATCACGCTCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCAGACAAACGACTGTAGAACg < 1:720507/140‑1 (MQ=255) ggATATTCCGCTTTATCAGCAGATTTAGCGCTATTACAAAGAAAACAGGCATCAGGGGCGTATAAAAAAAGGAATGAAGCTCCCTACCAAAACACTCCGGGCTAGTCAGCTTTCCAACAGTCACACGACTGTAGAACGTg < 2:1565904/140‑1 (MQ=255) gATTTTCCGATTTATCAGCAGCTTTATCGATATTTAAAAGAAAACATGCATCCGGGGCGTATTAAAAAAGTAATGAACCTCCCTACCAAAAGACCCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc < 2:3041085/140‑1 (MQ=255) tCCGCGTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 1:1022899/1‑140 (MQ=255) cGCTTTCTCCGCAGGTTTATCGATATTTAAAATAAAACTTGCATCCGGGGGTTTTTAAAAAAGTAATGAAGCTCCCTTCCAACACACTCCTGGCGAGTCAGGTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGac < 2:1606505/140‑2 (MQ=255) cGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGAGCCTATGaa > 2:3399495/1‑140 (MQ=255) cGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGAATGTAGAACGTGCCTATGaa > 1:5439215/1‑140 (MQ=255) gCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAAc > 1:5344661/1‑140 (MQ=255) cTTTATACGCATATTTATCCATATTAAAACCAAAACAGGCATCCGGGGCGTATTAAAAAAGCAATGAAGGGCCCTTCCAAAAGACTCGTGGCGAGGCCGGTTGCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACa < 2:3618367/140‑1 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAATGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTCTGAACAg > 2:4395210/1‑140 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 1:271848/1‑140 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 1:2346394/1‑140 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 1:5201120/1‑140 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 2:4143112/1‑140 (MQ=255) tCAGCAGCTTTATCGCTATTTCAAAGAAAACATCCATCAGGGGCTTATAAAAAAAGGAATGAAGCCCCCTTCCAAAAGACTCCTGGCGAGTCAGGTTTCCACCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:732713/140‑1 (MQ=255) gcagcTTTACCGCTATTTCAACGAAAACAGGAATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCACAAGACGCCTGGCGAGTCAGCTTGCCCTCAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTtgctg < 2:4757031/140‑1 (MQ=255) ccagcTTTATCGATATTTCAAAGAAAACATGAAACAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTACCAAAACACTCCTGGCGAGTAAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtgctg < 2:2778493/139‑1 (MQ=255) agcTTTATCGCTATTACAAACAAAACCTGCATCCGGGGCGTATACAAAAAGGAATGAAGCGCCCTACAAAAACACCCCGGCCGAGTCAGCGTCCCAGCCGCCCCACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3095914/140‑1 (MQ=255) agcTTTATCGATATTTAAAACAAAACATGCATCAGGGGCTTATAAAAAAAGCAATCAAGCTCCCTACAAAAACACACCTGGCGAGTCAGCTTTCCAACAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:4309229/140‑1 (MQ=255) agatttAACGCTATTTAAAACAAAACACCCACCAGGGGGGAAATAAAAAAGCATTGAAGCTCCATTCCAACCCACTCCTGCCGAGTCCGCTTCCCAACTGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:907496/137‑1 (MQ=255) agagttATCGCTATTACAACAAAACCAGCCAACCGGGCCGTATAAAAACAGCAATCAAGCTCCCTTCCAACACACCCGGGCCTATTATCCTTTCCATCAGAAAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:407828/136‑1 (MQ=255) gatttATCGATATTAAAAACAACACAAGCAACCGGGGCGTATCAAAAAAGCACTGAAGCCCCCCTCCAAAACACGCCTGGCGAGTCAGCTGTCAAACACTCACACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg < 1:2190534/138‑1 (MQ=255) ctttcgcGCTATTTCAAACAAAACCTGCATCCGGGGCGTATTCAAAACGCAATGAAGCTCCCTTCAAAACGACTCCTGGCGAGTCAGCTGGCAATCAGTCACACGACTGTAGAACGTGCCTATGACCAGCTTGATGCTGa < 2:1294/134‑1 (MQ=255) cTTTTTCGCTATTTAAAAGAAAACATGAATCTGGGGCGTATTCAAAAAGGAATCACGCTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTTCCATCAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:3752461/140‑1 (MQ=255) cTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCCGTCAACCGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1740626/140‑1 (MQ=255) atttATCGATTTTTCAAAGAAAACATGCATCCGGGGCGTATTCAAAATGGAATGAAGCTCCCTTCCAAACGACTCCTGGCGAGTCTGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:5494504/139‑1 (MQ=255) tCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa > 2:5182020/1‑89 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 1:1972036/86‑1 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc > 2:1972036/1‑86 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 1:2619473/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTACCTTACAAAAGACTCCTGGCGAGTCAGCTTTCAATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGCGCTATATc > 2:3863970/1‑140 (MQ=255) tCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTg > 2:2226617/1‑140 (MQ=255) tCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTg > 2:4177324/1‑140 (MQ=255) aataaaaCATGAATCTGGGGCGTATTAAAAATGTATTGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:3924160/137‑1 (MQ=255) aacaaaaCATGCATCCGGGGCTTATTCAAAAAGGAATGAAGCTCCCTTCAAACAGACTCCGGGCGAGTCAGCTTTCCATCCGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:1873614/137‑1 (MQ=255) aaTGAATCAGGGGCTTTTAAAAAAAGTATTTAAGGTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTCCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaa < 2:900374/139‑1 (MQ=255) gCATCAGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAATCGACTGTATAACGTGCCTATGAACAGCTTGCTGCTGAGGGCGATATCGTGAGCAAGCCatgaa > 2:3667282/1‑140 (MQ=255) gCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaagaa > 2:4079656/1‑140 (MQ=255) aTCCGGGGCGAATTCAAAAAGCAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCCGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGc < 2:3816782/140‑1 (MQ=255) cAGGGGCGTATTAAAAAAGGAATGACGCACCCTCCCAAAAGACTCGTGGCGAGTCCGCTTTCCATCCTTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCgg < 1:788235/140‑1 (MQ=255) gggCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTAGATCGTGAGCAAGCCAAGAAGCGGATg > 1:3033100/1‑140 (MQ=255) cttATTAAAAAAGGAATTAAGCTCCCTACCAAACCACGCCTGGCGAGTAAGCTTTCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGtt < 1:104996/138‑1 (MQ=255) cGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGtt > 2:4776217/1‑140 (MQ=255) cGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGAGGGtt > 1:5545954/1‑140 (MQ=255) tATTCAAAAAGTAATTAAGCACCCTTCCAAAAGACTCCTGGCGAGACAGCTTACCATCAGTCAAACTACTGTAGAACGTCCCTATCAACACATTGCTGCGGAGGGCTATAGCGAGAGCAAGCCAACAAGCGGATGGTTTg > 1:5746632/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGCCTGTAGAACGTGCCTATGAACAGCTTGCTGCTGCGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:755491/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:3748593/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:1725104/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:4645332/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:4025491/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGATGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:3834236/1‑140 (MQ=255) aaaaaGGATTGACGCTCCCTACCAAAACACTCCTGGCGAGTCAGCTTTCCATCTGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt < 2:5268613/140‑1 (MQ=255) aaaaaGGAATTACGCTCCCTTCCAAACGCCTCCTGGCGAGTCAGCTTTCCCTCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt < 2:2446559/140‑1 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 2:5417618/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 2:4440139/1‑140 (MQ=255) aaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTa > 2:1002433/1‑140 (MQ=255) aaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGGTTGCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTAt < 2:196385/140‑1 (MQ=255) aGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATc < 2:298666/140‑1 (MQ=255) ggAAGGCAGCTCACTTCAAAACGACGCGGGGCGAGACAGCTTTCCACCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCa < 1:3583859/140‑1 (MQ=255) ccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAttt > 1:1148308/1‑140 (MQ=255) ccAAAAGACTGCTGGTGATTAAGTTTTCCATCCTTCAATCGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCg < 2:5746632/140‑1 (MQ=255) aataGACTCGGGGCTAGTCAGCTTTCCATCAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa < 2:2414529/137‑1 (MQ=255) aaaaGACTCCTGGGGAGTCAGCTTGCCAGCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa < 2:507427/140‑1 (MQ=255) aaaaGACTCCGGGCGATTCAGCTGTCCATCATTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa < 2:1781317/140‑1 (MQ=255) aaaaGACTCCGGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa < 1:2873484/140‑1 (MQ=255) gACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGAGGGTTGGCTGATTATCATGATTCTGATTTTGCGTATCGt > 2:1216479/1‑140 (MQ=255) ccTCCTGGCGAGTCAGCTTACCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTa < 1:2132520/139‑1 (MQ=255) aCTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTa < 1:4782658/140‑1 (MQ=255) | ACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAAT > NZ_CP034943/548980‑549257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |