| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 607,562 | G→C | 7.4% | G135G (GGG→GGC) | EO946_RS03185 → | collagen‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 607,562 | 0 | G | C | 7.4% | 485.9 / 2.9 | 211 | G135G (GGG→GGC) | EO946_RS03185 | collagen‑like protein |
| Reads supporting (aligned to +/- strand): ref base G (68/118); new base C (2/11); total (76/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 218 total aligned reads displayed.
CAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAG > NZ_CP034943/607423‑607701 | caggagcgacaggagcgaCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggg < 1:3976639/140‑1 (MQ=255)caggagcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGGGCGCCGGGAGCTACCGGCGAAGCGGGACCAGCTGGGGCGGCGGGAGCGTCAGGAGCTAGCGGGGGCGCCGGGGCAGCCggg > 2:2564530/1‑140 (MQ=17)caggagcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGGGCGACCGGAGCAACCGGGGAAGCGGGCCCAGCGGGAGCGACGGGCGCAACAGGAGCACCCGGGGCCGCCGGCCCGGCCggg > 2:1630738/1‑140 (MQ=17) gcgccccaggagcTACCGGGGAAGCGGGACCAGCCGGAGGGACAGGCGGGACTGGAGCGTCAGGTGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGTCAGGAGCTACCGGGGAAGCCGGACCATCCGGGGcc < 2:4610875/134‑1 (MQ=17) ctactggagcTACCGGGGAAGCCGGACCAGCCGGAGCGCCAGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACg < 2:2111632/135‑1 (MQ=255) tgcggagcTCACGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg < 1:4520442/137‑1 (MQ=17) acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg < 1:4488812/140‑1 (MQ=255) acaggagcGCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGCGCTACAGGAGCTTCCGGGGCCGCTGGAGCTCCGGGCGCGCCGGGGGCGGCGGGCGCTCCCGGGGACGCCGGGCCGGCGGGGGccggggg > 2:823328/1‑135 (MQ=12) gccctcccGGTGAACCCGGACCAGCCGGAGCCCCAGGAGCGACAGGAGCCCCAGGAGCAACCGGTGAACCAGGACCTCCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGcc < 2:1435667/134‑1 (MQ=17) gcTCCCGGGGAAGCAGGACCACCCGGAGCAACAGGAGCGCCAGGAGCGCCAGGCGCTACCGGTCAAGCTGGACCTGCGGGAGAGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac < 1:4151289/140‑1 (MQ=18) gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGCGCGACAGGAGATACCGGGGAAGCTGGACCACCTCGAGCGACGGGAGCGACAGGAGCTCCCGGGGAAGCCGGAGCAGCCGGGGCCCCGGGCGCcac > 1:4991678/1‑140 (MQ=18) cTACCGGGGAAGCCGGCCCAGCCGGAGCCACCGCAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCTTGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca < 1:1768819/140‑1 (MQ=17) cTACCGGGGAAGCCGGACCAGCCGGAGCGCCAGGAGCGACAGGAGCGACTGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca < 1:1025026/140‑1 (MQ=255) cTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca < 1:1169036/140‑1 (MQ=255) caCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCGGGACCAGCTGGAGCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAg < 1:3423153/139‑1 (MQ=255) aCCGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg < 1:1492604/140‑1 (MQ=255) aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg < 1:4909200/140‑1 (MQ=255) aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGCAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg < 1:1170859/140‑1 (MQ=255) aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg < 1:6183/140‑1 (MQ=255) cgcgcacgCCGCACCCGCCGGCCCCCCAGGACCGACCGGAGCGCCCGGAGCGACCGGGGAAGCTGGACCAGCGGCAGCCACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCCACGGGAGCCACAgggg < 2:195653/133‑1 (MQ=17) cGGGGAAGGCGCACCCGCCGGAGGCGCAGGAGCGACAGGAGCGACAGGTGAGACTGGGCACGCTTGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgggg < 2:4460342/140‑1 (MQ=18) cGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgggg < 1:5617730/140‑1 (MQ=255) ggcaGCCGGCCCAGCCGGAGCTCCCGGAGCCACAGGAGCGCCCGGAGCACCCGGCGAAGCTGGACCCGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGCAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa < 2:2213563/137‑1 (MQ=18) ggacgcCGGACCCGACGGACCCACAGGCCCGACAGGAGCGAGAGGAGCTACCGGGGATGCTTGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa < 1:1953606‑M2/134‑1 (MQ=255) ggAAGCGGCACCAGCCGGACCGCCCGGAGCGTCATCAGCGACAGGAGCACACGGCGAAGCAGGACCTCCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa < 2:5717664/140‑1 (MQ=17) ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGCGCAGCTGGACCAGCTGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCCCGGGAGCCACAGGGGcga > 2:5051264/1‑138 (MQ=21) ggAAGCCGGACCAGCCGGACCGACCGGCGCGACAGCAGCGACAGGAGCTACCGGGGAAGGTGGTCCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa < 1:5213291/140‑1 (MQ=18) cgcacccGGACCCCCCGGAGCCAGCGGAGCCACAGGAGCGACAGGAGCTCCCGGACCAGCAGGACCTCCTGGAGCCACGGGAGCGACTGGCGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa < 2:311728/135‑1 (MQ=17) cccgcccAGCCGGACCTACAGGAGCGACCGGAGCGACCGGAGCTCCGTGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTggg < 1:430878/135‑1 (MQ=18) ccGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGCGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGCGCTACCGGTGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTggg < 1:3216350/140‑1 (MQ=255) ccGGACCACCCGGAGCCACAGGAGCGACAGGAGCCACCGGAGCGACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTggg < 1:4911876/140‑1 (MQ=18) cGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTgggg > 2:4060537/1‑140 (MQ=255) ccccgCCCGAGCCACACGAGCGCCCGGAGCCACCCGAGCCGCCGGCGACGCCGGACCAGGAGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg < 2:4991678/136‑1 (MQ=18) aCCAGCCGGAGGACCAGGACCCACAGGAGCTAAAGGAGCCACCGGGGAAGCAGGACCCGCTGGAGCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCGGGGGCCACGGGAGCCACAGGCGCTACGGGGGAAg < 1:2244804/140‑1 (MQ=18) aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTggggccg > 2:3316160/1‑137 (MQ=255) aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg < 2:1322036/140‑1 (MQ=255) aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg < 2:351750/140‑1 (MQ=255) aCCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGacg > 1:5234176/1‑138 (MQ=255) ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGCAGCCGGACCCGCCGGGGCCACGGGAGCCCCAGGGGCTACTGGGGAAGCCGGa > 2:1491148/1‑140 (MQ=255) ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg > 1:2960270/1‑135 (MQ=255) ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg < 2:2960270/135‑1 (MQ=255) cGGAGCTACAGGACCTCAAGGAGCCCAAGGAGCAACCGGCGAACCTGGACGTGCGGGAGGGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACTGGAGCCACAGGCGCTACTGGGGAAGCCGGAc < 1:5520172/140‑1 (MQ=12) cGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGAc < 1:4605292/140‑1 (MQ=255) ctacaggagcgacaggagcgacaggagcTACCGGGGATGGTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGcc < 1:3699028/138‑1 (MQ=255) cgacaggagcgacaggagcgacaggagCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGcc < 1:4041040/140‑1 (MQ=255) ccaggagcgcccggacccccaggcgcTCCCGGAGCAGCCGGACCGCCCGGAGCGACGGGAGCGACAGGAGCACCCGGGCAAGCCGGACCCGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg < 2:2379160/139‑1 (MQ=17) acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg < 1:4904051/140‑1 (MQ=255) ccggcgcgacaggagcccccggagcTCCCGCGGACGCGGGACCAGCTGGAGGGACGGGAGCGACCGGAGCCCCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGa < 2:1265829/135‑1 (MQ=18) caggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTCGGGAATCCGGACCAGCCGGa > 1:4801259/1‑140 (MQ=255) cgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACa < 1:1651925/140‑1 (MQ=255) acaggagcgacaggagcTACCGGGGACGCTGGACCAGCTGGAGCGACGGGAGCGACAGGGGCTACCGGGGAAGCCGGACCAGCCGGGGCCACCGGAGCGACAGGGGCTCCCGGGGCAGCCGGACCACCCGGAGCCACAgc > 2:3278553/1‑139 (MQ=18) acaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCCACAGGAGCCACTGGCGCTACAGGCGCAGCCGCACCAGCCGCAGCCACAgc > 1:5275327/1‑139 (MQ=18) cgccccaggagcGACCGGGGAACCGGGACCAGCTGGAGCGACGGGAGCCACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa < 1:4084137/135‑1 (MQ=18) agcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCtc > 1:2862608/1‑139 (MQ=18) gcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCtcc > 2:377693/1‑138 (MQ=255) actggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg < 1:4194359/137‑1 (MQ=255) acaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACTGGAGCGACAGGAGCTACCGGGCAAGCCGGACCAGCCGGGGCCACTGGACCAACACGCCCAACGCGCGAAGCCGCACCTGCCGGAGCCACAGGACCTACCgg > 1:5424269/1‑140 (MQ=17) acaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACGGGGGACGCCGGACCAGCCGGAGCGACGGGAGCGACAGCGGCTACTCGTCACCCCGGACCCGCGGCACCGACAGGAGCtcgctg > 1:845438/1‑135 (MQ=14) aggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg > 2:566100/1‑140 (MQ=255) cGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc < 1:4100916/140‑1 (MQ=255) cGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc < 1:3578843/140‑1 (MQ=255) aggggccgCTGGACTTGCTTGAGCTAGTGGAGCCAAAGGAGCTACCGGGGTAGCCGGACCCCCCGGTGCCACGGGAGCCACAGGCGCTACTGGGGAAGCCGGACCAGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGAc < 2:3183467/133‑1 (MQ=14) gggAAGCTGGACCAGCTGGAGCGCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCa < 2:1718390/140‑1 (MQ=255) gCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg < 1:5497664/140‑1 (MQ=255) ccAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg < 2:4412800/62‑1 (MQ=255) ccAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg > 1:4412800/1‑62 (MQ=255) gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg < 1:2709703/140‑1 (MQ=255) cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa > 1:4847723/1‑140 (MQ=255) gggAGCGACGGCCGCCCCAGGAGCACCCGGGGCAGCCGGACCCGCCGGCGCCACGGGAGCCACCGGCGCTCCTGGGGTAGCCGGACCCCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAg < 2:4899440/139‑1 (MQ=14) cgcgcCGGGAGCCCCACGAGCTCCCGGGGAAGCCGGACCCGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa < 2:4801259/139‑1 (MQ=17) aGCGACGGGAGCGACAGGCGCTTCCGCGGACCCGGGACCACCCGCTGCCACCGGAGCCCCAGGCGCTTCAGGTCAAGCAGGAGCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa < 2:3691526/140‑1 (MQ=9) aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca > 2:966366/1‑61 (MQ=255) aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca < 1:966366/61‑1 (MQ=255) aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa < 1:566100/140‑1 (MQ=255) gCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca < 1:1845180/60‑1 (MQ=255) gCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca > 2:1845099/1‑60 (MQ=255) gccggcgcgaccgGAGCTACCGGGGAAGCCGGACCACCCGGAGCCTCGGGAGCCACAGGGGCTACTGGGGAAGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGacgggagccacagg < 1:2635865‑M1/134‑15 (MQ=255) cGGGAGCCACAGGAGCCCCCGGCCAAGCCGGACCAGCCGGCGCCACCGGAGCCACAGGGGCTACTGGCGAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg < 1:3064414/140‑1 (MQ=17) gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCTCACCAGCCCGAGCGCAGGGAGCGACGGTGGAAGGCTGGCCAGCCGTCGGGTCCGGAGCTAGCgcgg > 2:1034492/1‑140 (MQ=9) gCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg > 2:1395285/1‑35 (MQ=255) gCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg < 1:2540584/35‑1 (MQ=255) cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCAACCGGCGCAGCAGGACCAGcc > 2:4322662/1‑140 (MQ=17) aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg > 1:2189976/1‑140 (MQ=255) aCCGGGGAAGCCGGACCACCCGGGGCCACGGGAGCCACAGGCGCTACAGGCGAAGCCGGACCAGCCGGAGCGACACTAGCTACCGGGGAAGCCCGACCAGCCGGAGGGACAGGAGCTCGCGGGGACGCCGGCCCAACCgg > 1:2953716/1‑140 (MQ=17) ccGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGa < 2:5783452/140‑1 (MQ=255) ggAAGCCGGACCAGCCGGGGCCACGGGAGCCCCAGGGGCTCCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGa < 1:655570/140‑1 (MQ=255) ggAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGa < 1:17022/140‑1 (MQ=255) ggAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGa > 1:2549824/1‑140 (MQ=255) ggAAGCCGGACCACCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTTCCGGGGAAGCCGGACCTGCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGa < 1:348779/140‑1 (MQ=17) gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg < 1:2800701/35‑1 (MQ=255) gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCgcccgg > 1:3363978/1‑135 (MQ=255) gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAACCGGAGCGACCgg > 1:2441686/1‑140 (MQ=17) ggcccACCCGGGGCCACGGGAGCCACAGGGGCAACTGGGGAACCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGc < 1:5713256/137‑1 (MQ=255) acactccGGCGCCCCCGGAGCCACAGGCGCTACGGGTGAATCCGGACCTCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTa < 2:3582396/135‑1 (MQ=11) aCCCGCCGGCGCCCCGGGAGCCACCGGGGCTACGGGCGAAGCCGGACCCGCGGGAGCCACAGGAGCTACCGGGGCCGCCGGCCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTa < 2:3845216/140‑1 (MQ=14) aCCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCtc > 1:1980265/1‑139 (MQ=255) gCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAc > 2:4174215/1‑56 (MQ=255) gCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg < 2:4286164/69‑1 (MQ=255) ccGGCGCCACGGGAGCCACAGGGGCTCCTGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg < 2:1917128/140‑1 (MQ=255) ggCCACGGGAGCCCCAGGCGCCACTGGGTAAGCCGGAGCCCCCGGAGCGACAGGAGCTACCGGCGCAGCCGGACCAGCCGGCGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg < 2:4263012/140‑1 (MQ=14) | CAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAG > NZ_CP034943/607423‑607701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |