| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 686,638 | C→G | 10.0% | L103V (CTT→GTT) | purM → | phosphoribosylformylglycinamidine cyclo‑ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 686,638 | 0 | C | G | 10.0% | 1250.0 / 20.1 | 471 | L103V (CTT→GTT) | purM | phosphoribosylformylglycinamidine cyclo‑ligase |
| Reads supporting (aligned to +/- strand): ref base C (93/315); new base G (45/2); total (153/318) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.10e-24 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 472 total aligned reads displayed.
TTAATTTCGGGAACGGACGGTGTCGGCACCAAATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGATTATATACAGCAG > NZ_CP034943/686500‑686776 | tAATTTCGGGAACGGACGGTGTCGGCACCAAATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCtt < 1:1934582/140‑1 (MQ=255) tgtCGGCACCAAATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTTATTATTTAGCGGTCGGaa > 2:732704/1‑140 (MQ=255) gtCGGCACCAAATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGaaa > 2:103047/1‑140 (MQ=255) cGGCACCAAATTAAAGCTCGCTTGTTCCATGGCTAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAg < 1:5674072/140‑1 (MQ=255) ccAAATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGAc < 2:2830947/140‑1 (MQ=255) ccAAATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGAc < 2:2973975/140‑1 (MQ=255) ccAAATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGAc < 1:5331567/140‑1 (MQ=255) acAAATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGAc < 2:3979949/139‑1 (MQ=255) aaaTTAAAGCTCGCTTTTTCCATTGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCAGTTGTTTTTTATTGTTTATTTAACGTTGCGAAAAGCCGAacc > 1:4041511/1‑140 (MQ=255) aaaTTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTGGTTTTTTGTTGATTATTTAGCGGTCGGAAAAGCGGAccc > 1:4314404/1‑140 (MQ=255) ttAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTAt < 1:1553965/140‑1 (MQ=255) aaaGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGa < 1:5035974/140‑1 (MQ=255) gCTCGCTTGTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGaaaa < 2:4777150/140‑1 (MQ=255) cGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTg > 2:806579/1‑140 (MQ=255) cGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTg > 2:4583410/1‑140 (MQ=255) gCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTGTTGTTTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAAATGa > 1:4260762/1‑140 (MQ=255) gCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTGTTGATTATTTATGGGTCGGAAAACCGGACCCGATGAAAATTGa > 1:1767764/1‑140 (MQ=255) gCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCGTGATTATTTAGCGGTCGGAAAAGCGGACCCTATTAAAATTGa > 2:449435/1‑140 (MQ=255) gCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTGGTTTTTTGGTGATTATTTATCGGTCGGAAAAGCGCGCCCTAAGaaaaatta > 1:893516/1‑136 (MQ=255) cTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAg < 2:1872878/140‑1 (MQ=255) tttttGCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGATCAGTTGTTTTTTTTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGc < 2:1413373/140‑1 (MQ=255) tttCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGTTGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAg < 2:1888401/140‑1 (MQ=255) tttCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAg < 2:2042961/140‑1 (MQ=255) tttCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAg < 2:2505762/140‑1 (MQ=255) ttCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGa < 2:3379529/140‑1 (MQ=255) gATAAGCATGACACGTTTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACa < 2:5362320/140‑1 (MQ=255) gATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGTGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACa < 1:2099695/140‑1 (MQ=255) gATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACa < 1:5415256/140‑1 (MQ=255) gATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACa < 1:5546793/140‑1 (MQ=255) gATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACa < 2:4323159/140‑1 (MQ=255) gATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCAATGAAAATTTAGCAGATCGTaaa > 2:775319/1‑138 (MQ=255) gATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGAGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACa < 2:5799131/140‑1 (MQ=255) tAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAg < 2:2151156/140‑1 (MQ=255) gCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGgtg < 1:924672/140‑1 (MQ=255) aTGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTGTTGGTTATTTATCGGTCGGTAAATCGGGCCCACTGAAAATTGATCAGAAAGTACAAGGTGTa > 1:521301/1‑140 (MQ=255) acacGCTTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAATGGGACCGGATGAACAGTGGGCAGCTCGTACAATGTGTAGCg > 2:4416507/1‑140 (MQ=255) acacGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTTTTTTTTATTTATCGGTGGGGAAAGCGGACCCGATGAAAATTTAGCAGATAGTAAAAGGTGTATCg > 1:2361241/1‑140 (MQ=255) acacGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTGGTGATTATTTAGCGGTCGGAAAAGCGGGCCCGATGAAAATTGAGCAGATCGTACAAGGGGTAGCg > 1:3023590/1‑140 (MQ=255) cacGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTTTTTTTTGTTTATTATTTATCGGTCGGTAAATCGGACCCAATGAAAAATTGTCAGATCGTACAAGGTGTTGCGa > 1:5597382/1‑140 (MQ=255) acGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTTTAGCGaa < 1:1130809/140‑1 (MQ=255) acGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGaa < 1:3263109/140‑1 (MQ=255) acGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGaa < 2:1660793/140‑1 (MQ=255) acGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGaa < 1:4120352/140‑1 (MQ=255) aTTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACa < 1:204546/125‑1 (MQ=255) aTTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACa < 1:1251711/125‑1 (MQ=255) ttGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTGTTGTTTATTTTGCGGTCGGGAAAGCGGAACCCATGAAAATTTCGCAGATCGGACAAGGTGTTGCGAACCGc > 1:5791841/1‑140 (MQ=255) ttGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCt > 2:3881335/1‑70 (MQ=255) ttGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGTATATTTAGCGGTCGGAAAAACGGACCCTATGAAAATTGAGCAGATAGTACAAGGGGTAGCGAACGGc > 2:3293832/1‑140 (MQ=255) ttGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTAc < 1:4211459/123‑1 (MQ=255) ttGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTAc > 2:4211459/1‑123 (MQ=255) ttGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTATCGGTCGGAAAAGCGGACCCTATGAAAAATTAGCAGATAGTAAAAGGTGTAGCGAAAGGCTGTGAg > 2:3147477/1‑140 (MQ=255) ttGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAg < 2:514990/140‑1 (MQ=255) ttGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAg < 2:4692762/140‑1 (MQ=255) ttGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAg < 1:1876670/140‑1 (MQ=255) gACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCa > 2:2666132/1‑140 (MQ=255) gACGCTGTGGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTGGTTTTTTCGTGATTATTTAGCGGTCGGAAAAGCGGACCCTAGGAAAATTGAGCAGATCGTGCAAGGGGTAGCGAACGGCTGTGTGCa > 2:2879144/1‑140 (MQ=255) cGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGt < 1:775319/140‑1 (MQ=255) cGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGt < 1:4560542/140‑1 (MQ=255) gTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAACCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCAGTGAGCAGTCAgg > 2:4956386/1‑140 (MQ=255) ttcGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCAGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGtt < 1:5459939/138‑1 (MQ=255) tGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGtt < 1:1083010/140‑1 (MQ=255) tGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGtt < 1:1027291/140‑1 (MQ=255) tGCGATGTGTGTCAATGATGTGCGGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGtt < 2:1352843/140‑1 (MQ=255) gATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAg < 2:368051/140‑1 (MQ=255) tgtCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTTTTGCTTTTTTATCGCTGGGGAAAACGGACCCTAGGAAAAATTATCACATAGTACAAGGTGTATCCAAAGGATGTGTTGATTGAGGTTCATCCCTAg > 1:3718599/1‑140 (MQ=255) tgtCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTTTTGATTATTTTTCGGTCGGTAAAGCGGGCCCGAGGTAAATTGATCATATAGTTAAATGTGTTTCGAAAGGGTGTTAGCAGTGAGGTTGAGCCtttt > 1:4468041/1‑138 (MQ=255) tgtCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACCGCGGTGAGCAGTCAGGTTCAGCCTTAg > 2:3499200/1‑140 (MQ=255) tgatgTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTATCGGGCGGAAAAGCGGACCCTAAGAAAAATTAGCACAACGTAAAACGTGTAGCGAAAGGCAGTGAGCAGTAAGGTTCAGCCTTATTcggcg > 2:56696/1‑140 (MQ=255) tgatgTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTATTGATTATTTATCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTATCGAAAGGCTGTGAGCCGTCCGGTTAAGCCTTAGTcggcg > 2:4880798/1‑140 (MQ=255) tgatgTGCTGGCACAAGGCGCAGAGCCGTGGTTTTTTATTGATTATTTAGCGGTCGGAAAAGCGGACCCAATGAAAAATGAGCACATCGTACAAGCTGTATCGAACGGCTGTGAGCAGTCAGGGTAAGCCTTAGTcggcg > 2:2232707/1‑140 (MQ=255) aGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTATCGGTCGGAAAAGCGGACCCTATGAAAATTGAACAGAACGTACAAAGTGTAGCGAAAGGCGGTGAGCAGTAAGGTTAAGCCATAGTCGGCGGCGAAAAGGCTgaga > 2:3607542/1‑140 (MQ=255) aGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTgaga > 2:4294425/1‑140 (MQ=255) gcgcAGAGCCGTTGTTTTTTGTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGGGTAGCGAAAGGCTGTGAGCAGTCAGGTTCAGCCTTAGGAGGCGGCGAAACGGCTGAGATg > 2:5536356/1‑140 (MQ=255) cgcAGAGCCGTTGTTTTTTCTTGATTTTTTTGCGTTAGGAAAAGAGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGc < 1:3413180/140‑1 (MQ=255) cgcAGAGCCGTTGTTTTTTCTTGATTATTTCGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGc < 1:2586922/140‑1 (MQ=255) cgcAGAGCCGTTGTTTTTTCTTGATTATTTCGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGc < 1:3563775/140‑1 (MQ=255) cgcAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGc < 1:2498723/140‑1 (MQ=255) cgcAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGc < 2:520034/140‑1 (MQ=255) cgcAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGc < 1:2287229/140‑1 (MQ=255) cgcAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGc < 1:216063/140‑1 (MQ=255) cgcAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGc < 1:2970070/140‑1 (MQ=255) cgcAGAGCCGTTGTTTTTTCTTGATTATGTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGc < 1:4741999/140‑1 (MQ=255) cAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCg < 1:1340381/140‑1 (MQ=255) atccGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 2:935843/138‑1 (MQ=255) agCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 1:3768655/140‑1 (MQ=255) agCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 1:3161445/140‑1 (MQ=255) agCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 1:3903875/140‑1 (MQ=255) agCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 2:4148034/140‑1 (MQ=255) agCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 2:3781239/140‑1 (MQ=255) agCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 1:4810693/140‑1 (MQ=255) agCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 1:807038/140‑1 (MQ=255) agCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 2:117281/140‑1 (MQ=255) agCCGTTGTTTTTTCTTGATGATTGAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGa < 2:1562107/140‑1 (MQ=255) ccGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGAtt < 1:4651603/140‑1 (MQ=255) tttttttttttTGATTATTTAACGGTCGGAAAAGCGGCCCCTAATAAAATTTATCAGATAGTACAAGGGGTAGCGAACGGCTGTGAGCAGTCACGTTAAGCCTTAGTCGGCCGCGAAACCGCGGAGATGCCGGGATtata > 2:903962/4‑140 (MQ=255) ttgttTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGATtata < 1:287371/140‑1 (MQ=255) ttgttTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGATtata < 1:4956386/140‑1 (MQ=255) gttTTTTGTTGATTATTTATCGGTCGGAAAAGCGGACCCGATGAAAATTGAGCAGATCGTACAAGGTGTATCGAACGGCGGTGAGCAGTCAGGTTCACCCTTATTCGGCGGCGAAAAGGCTGAGATGCCGGGATtatata > 2:3218194/1‑140 (MQ=255) tttttCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGGCGGCGGCGAAACGGCTGAGATGCCGGGATTATATAca < 2:1283406/140‑1 (MQ=255) ttttCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGATTATATAcag < 2:4078070/140‑1 (MQ=255) | TTAATTTCGGGAACGGACGGTGTCGGCACCAAATTAAAGCTCGCTTTTTCCATGGATAAGCATGACACGATTGGCGTTGACGCTGTTGCGATGTGTGTCAATGATGTGCTGGCACAAGGCGCAGAGCCGTTGTTTTTTCTTGATTATTTAGCGGTCGGAAAAGCGGACCCTATGAAAATTGAGCAGATCGTACAAGGTGTAGCGAACGGCTGTGAGCAGTCAGGTTCAGCCTTAGTCGGCGGCGAAACGGCTGAGATGCCGGGATTATATACAGCAG > NZ_CP034943/686500‑686776 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |