| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 755,530 | A→C | 6.2% | Q22P (CAA→CCA) | EO946_RS03880 → | rhamnogalacturonan acetylesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 755,530 | 0 | A | C | 6.2% | 789.8 / 5.2 | 305 | Q22P (CAA→CCA) | EO946_RS03880 | rhamnogalacturonan acetylesterase |
| Reads supporting (aligned to +/- strand): ref base A (208/60); new base C (2/33); total (210/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.02e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 313 total aligned reads displayed.
TCACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGGAT > NZ_CP034943/755391‑755669 | aCCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAg > 2:3492216/1‑140 (MQ=255) aGGGATGAGCTTTCCATGATTGATGCAATATGAAACGAAAAAAACGAGTGGGAATGAGAAATGGCAAATCAAATTTATCTTGCTGGCTATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGGGGGGGCa < 1:4877904/140‑1 (MQ=255) gAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGtt > 1:3630922/1‑140 (MQ=255) gAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGtt > 1:609164/1‑140 (MQ=255) gagCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTtct > 2:192742/1‑140 (MQ=255) gagCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCGTGCTGGCGATTCAACTGTTCACACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTtct > 2:2988764/1‑140 (MQ=255) gTCCATGCTTGATGCCATAGGAAACGAAAACAACGAGGGGCAAGGAGAAATCGCAAATCACAGTTATCTGGCGGGCGAGTCAACGGTTCACACGTATGCAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCt < 1:3490800/140‑1 (MQ=255) gTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCt > 1:4475786/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGTTTCAACTGTTCAGACGTATGGAGACAGCAGAATTCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:2301996/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:4258529/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:4981057/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:4014145/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:5016732/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:5346236/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATGTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCCAGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:2529716/1‑140 (MQ=255) gattgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 1:1883755/1‑140 (MQ=255) gattgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 1:5056908/1‑140 (MQ=255) gattgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 1:2559348/1‑140 (MQ=255) gattgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGGGGGGGCAGTTTCTCGGCTCGCATc > 1:4506184/1‑140 (MQ=255) gattgatGCCATATGAAACGAAAAAAACGAAGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 1:3987747/1‑140 (MQ=255) ttgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTg > 2:2302745/1‑140 (MQ=255) tgatGCCATAGGAACCGAAAAAAACGAGGGGGAATGAGAACTGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTACACACGTATGGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGc < 1:1672178/140‑1 (MQ=255) tgatGCCATAAGAAACGAAAAAAACGACGGGGAATGAGAAAGTGCAAATCACATTTATCTTGCTGGCGCTTCAACTGTTCAAACGTATGGAGACAGCACACCTCCCCGGGGGCGGGGGCAGTTTCTCGGCTCGCATCTGc < 1:1772029/140‑1 (MQ=255) gttGCCATCTGAAACGAAAAAAACGAGGGTTAATGAGAAATGGCAAATCACTTTTATCTTGCTGGCGATTCAACTGTTCAAACGTATCGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGcc < 2:65923/138‑1 (MQ=255) gatGCCATACGACACGAAAAAAACGAGGGGGAATGATACATGGCACATCACATTTATCTGGCTGGCGATTCAACTGTTCACACGTATGGAGACAGCACAACTCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGcc < 1:1470250/140‑1 (MQ=255) atGCCATATGAAACTAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCTCATCTGCCg > 2:3231055/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCACCTGTTCAAACGTATGGAGACAGCACCACTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:4939812/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCACACGTATGGAGACAGCACACATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:582838/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:5169756/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:1082615/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:2081692/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:3766075/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:2647391/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1344690/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:2003827/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:489665/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:2807369/1‑140 (MQ=255) atGCCAGATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCAGATTTATCTTGCTCGCTATTCAACTGTTCAAACGTATGGATACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:2563778/1‑140 (MQ=255) tatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCTGAGCat > 2:5571996/1‑140 (MQ=255) atGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCata < 1:4717642/140‑1 (MQ=255) atGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCata > 1:356609/1‑140 (MQ=255) caaCGAAATCAACGTGGGGGTCTGATAATTTGCAATTCTCATTTTTCTTGTTGGCGTTTCAACTGTTCATACGTATGGAGACAGCACAAATCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:4219050/139‑1 (MQ=255) aaaCTAAAAAAACGAGTGTTAATGAGAAATGGAAAATCAGATTTATCTTGCTGTCTATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:4924118/140‑1 (MQ=255) aaaCTAAAAAAACGAGGGGGAATGAGAAATCGCAACTCACTTTTATCTTGCTGGCGATTCACCTGTTCAAACGTATGGAGACAGCACACCTCACGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:319364/140‑1 (MQ=255) aaaCGAAACAAACGAGGGCGAATGATAAATGGCAAATCACATTTATCTTGCTGGCTATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:4475786/140‑1 (MQ=255) aaaCGAAAAAAACGAGGGGTCATGAGAAATGTCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:1560177/140‑1 (MQ=255) aaaCGAAAAAAACGAGGGGGAATGAGAAATGGAAAATCACATTTATCTTGCTGGCGATTCAACTGTTCCAACGTATGGAGACAGCACAAATCCAGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:179704/140‑1 (MQ=255) aaCGTAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTTCTGGCGATGCAACTGGTCCAACGTATGGAGACAGCACAAATGAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCAGCTGGCGGAGCATCTTCa > 1:5371378/1‑140 (MQ=255) aCGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACACATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa > 2:4102970/1‑140 (MQ=255) cGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATGTTCAAg > 2:5517803/1‑140 (MQ=255) aaacaaacGAGGGGTCATGAGAAATTGAAAATCACATTTATCTTTCTGGCGATTCAACTGTTCAAACTTATGGAGACATCAAAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTg < 2:1824618/140‑1 (MQ=255) aaaaaaCGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGa > 2:4959990/1‑140 (MQ=255) aaCGCGGGGGAATGCGAACTGGCAACTCACATTTATCGTGCTGGCGATTCAACCGTACAACCGTATGGAGACAGCACACCGCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTaa < 1:2471541/140‑1 (MQ=255) aaCCAGGGCGTATGAGAAACGGCAAAACACATATATCTTGCGTGCGATTCAACTCTACACACGTATGGACACACCACCACTCCCCGGGGGGGCGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTaa < 1:4140045/140‑1 (MQ=255) ttaaTTAGATATGGCTTATCACATTTATCTTGGTGTCGTTTCTACTTTTCAAACGTTTGGAGACAGCAGAATTCCTGGGGGGGGGGCGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCaa < 2:2451003/138‑1 (MQ=255) gAATGATAAATTGCTATTGACATTTATCTTGATTGCGATTAAACTGTTCAAACTTATGGAGACAGTACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCTCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAAt < 2:864452/140‑1 (MQ=255) taTGAGAATTGGCATCTCCCTTTTTTGTTGCTTGCTATTAACCTTTTCACGCGGATGCACTCACCCCATATCACGGGGCGAGGGGCCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATc < 2:1298050/139‑1 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCTAGTGATTAACAGAGCAATCGGGGgacgaa > 1:1100287/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaagac > 1:1570531/1‑139 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaagaa > 1:892446/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaagaa > 2:5143120/1‑140 (MQ=255) aaTCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACACATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTc > 2:5457929/1‑140 (MQ=255) aaTCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTc > 2:611029/1‑140 (MQ=255) aaTCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTc > 2:1243277/1‑140 (MQ=255) aaTCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGCGATTAACAGAGCAATCGGGGGAAGAAGCTc > 2:1724723/1‑140 (MQ=255) ttATCTTGCTGTCGTTTCACTTGTTATACCGTCTGGAGAGATCACCCCTCACGGGGGGTGGGGGGAGTTTCTCGGCTCGAATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACAt < 2:5645132/140‑1 (MQ=255) ctttcGATTAAACTTTTCAAACGTATTGAGACAGATCAAATCATGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa < 2:3914826/136‑1 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAACACATTTGTGGac > 1:5709542/1‑139 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGTaa > 2:2395562/1‑140 (MQ=255) cTGGCGATACAACCGTTCAAACGCAGGGAGACAGCACCACTCCAGGGGGCTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa < 1:4993506/140‑1 (MQ=255) cTGCCGATTCACCTGGACCACAGTCTGTAGACAGCCCACCTCAGGGGGGGTGGGGGCAGTGTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa < 2:2000581/140‑1 (MQ=255) taTTCAAGTGTTCAAACCTCTGGCGACAGCACAAATCATGGGGGGTGGGCGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAggg < 2:5204662/139‑1 (MQ=255) gATTCAACTGTACAAACGTATGTAGACAGCACAAATCCCGGGGGGTGGGGGGAGTTTCTCGGCTCGCATCTGCCTGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAggg < 2:3321581/140‑1 (MQ=255) tttCATCTGTTCATACTTATGGAGACAGCACATACCCTGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGc < 2:5122728/139‑1 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGATCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:5562666/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCCGGCTTCAg > 1:2123145/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCCGGCTTCAg > 2:4804234/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:1211358/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 2:4827963/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCAGCCGGAGCATCTTCAAGTGATTAACAGAGCACTCGGGGGAAGAAGCTCGAAAACATTGGTGGAAGAGGGCAGTCTTCAg > 2:288834/1‑140 (MQ=255) ccaccGTATGGAGACAGCCCAACTCCCGGGGGGTGGGGGCAGTGTCTCGCCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc < 1:2950397/136‑1 (MQ=255) cAAACGTATGGAGACATCACAAATCATGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATCAACAGAGCGATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc < 2:5404382/140‑1 (MQ=255) gTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTc > 2:2035709/1‑140 (MQ=255) tGGAGATAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 2:768242/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:269036/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 2:4672932/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGc > 1:1711304/1‑46 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGACGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:1459754/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:3303139/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:3260999/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:3386558/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:3672919/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:1387681/1‑140 (MQ=255) gCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAtt > 1:5408117/1‑140 (MQ=255) cacaAATCCAGGTGTGTGGGTGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg < 2:3614330/140‑1 (MQ=255) cacaAATCATGGCGGGTGGGTGCAGTTTCTCGGCTAGCATCTGACGGAGGATATTCAAGTGATTAACAGAGAAATAGGTGCAAGAAGATACAAAAAATATGTGGAAGAGAGAAGGATTCAGTAGATTCTTGATGTGATTg > 2:798586/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 1:1023314/58‑1 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa > 2:1023314/1‑58 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:213136/1‑140 (MQ=255) aaGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGGAt > 1:280970/1‑140 (MQ=255) | TCACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGGAT > NZ_CP034943/755391‑755669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |