| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 803,278 | G→T | 6.3% | Q29K (CAG→AAG) | yfmC ← | Fe(3+)‑citrate ABC transporter substrate‑binding protein YfmC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 803,278 | 0 | G | T | 6.3% | 1117.5 / 13.1 | 421 | Q29K (CAG→AAG) | yfmC | Fe(3+)‑citrate ABC transporter substrate‑binding protein YfmC |
| Reads supporting (aligned to +/- strand): ref base G (177/203); new base T (37/2); total (216/205) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.99e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 451 total aligned reads displayed.
AGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTAAACAC > NZ_CP034943/803139‑803417 | agaTTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTctg > 2:4051130/1‑140 (MQ=255) aTTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACTTCGTCGTGGTGGATCACACTATAATCCGTAGACTTGCGTTCGCTGCTTGCGCGGTTATTgtggg > 2:1625536/1‑139 (MQ=255) cAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGaa < 1:893360/140‑1 (MQ=255) aGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGGGCAGGATCACGCTAGAATCCATACACTAGCTTTCCCTCCATACGCTGTTATTGTGGCAGgaagaaa > 2:5290680/1‑139 (MQ=255) gCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACa > 2:258683/1‑140 (MQ=255) gCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACATCGTGGGGCTGGATGACGGGATAAACCTTATAAGTGCTTTCGCTTCGTGCGCTGTTATTCTGGCTGGATGAACa > 1:1271119/1‑140 (MQ=255) gCATCCAAGAATGAAAGCTCAAGGACAACCACTCGGTTGGGTGTGCCGCTTACTGTCGTGTTTGGTGCGTGGTGGAGGGTCACGGTAGAATCCATAGACTTGCTTTCGCGGCTTGCGCGGGTCTTCTGGCGGGATGaaga > 1:2478416/1‑138 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTATAATACTTAGACTTGCTTTAGCTGCTTACGCTGTTATTCTGGCTGGATGAACAg > 2:1848719/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTAGCTGCTTCCGCTGTTATTGTGGGTGGATGAACAg > 2:4356301/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCGTCTTCGTGCTGGATCACTCTAGAATCCGTAGACTTGCTTTAGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAg > 2:3107736/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCATATTCGGGCTGGGTCACTCTAGAATCCTTAGACGTTCTTTCGCTGCTTCCGCTGTTATTCTGGGTTGATGAACAg > 2:1764417/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTACATATTCGTGCTGGTTCACTCTAGAATCCTTAGACTTTCTTTCGCTGCTTCCGCGGTTATTATTGGTGGATGAACAg > 2:2310040/1‑140 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTCCTTCTTCGTGCTGGGTGACGCTACAATCCGTAGACTTTGGTTGGCTGGTTGCGGTTTTATTGTGggtgggtgtaaac > 1:4872851/1‑135 (MQ=255) cATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTCCATATTCGTGCGGGGACACGCTAGCATGCATAGACGTGCTGTCGCTGCTTCCGCGGGTATTTTGGCTGGATGAACAg > 2:3701263/1‑140 (MQ=255) aTCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGc < 1:5583522/140‑1 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTATGGCTGGATGAACAGCCg > 2:5011820/1‑140 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCGTCTTAGTGCTGGGTCACTCTAGAATCCGTAGACGTGCTTTCGCTGCTTCCGCGGTTATTCTGGCTGGATGAACAGCCg > 2:1943685/1‑140 (MQ=255) ccAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTCCGTGTTGGGGCGGGCTGACTCTAGAATCCGTGGTCGTGGTTGATCTGCGTGCGCTGTTATTATTGGTGGGTTAAAAGCCg > 1:5305399/1‑140 (MQ=255) aaGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGa < 2:4849210/140‑1 (MQ=255) tGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTGCTTCTTCGTGCTGGGTGACTCGAGAATCCTTAGACTTGCGTTAGCTGCTTCCGCGGTTATTATGGGGGGGTGAACAGCCGGATACaa > 1:3819719/1‑140 (MQ=255) tGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCCCTCTAGAATCCTTTGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACaa > 2:5673992/1‑140 (MQ=255) tGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTGCTTGGTTGTGGTGGAGCACTCGATAAAACTTAGACTTTGATTCGCTGCGTCCGCGGGTATTGTGGCTGGATGAACAGCCGGATACaa > 1:5786182/1‑140 (MQ=255) tGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTGCGTCTTCGTGGTGGGTCCCTCGAGTAAACTTAGAATTGCTTTGGCTGCTTGCCCAGTTATTCTGGCTGGATGTACAGCCGGATACaa > 1:5480519/1‑140 (MQ=255) aaaGCTCAAGGACAACCACGCGTTTAGGTGTGCCGCTTACTGTCGTGTTTCCTTCTTCGTGCTGGATCCCTCTAGCATCCTTAGGCGTGGTTTAGCTGCGTCCGCTGGTATTGTGGCTGGATGCACCGGCGGATACaaat > 2:5195231/1‑138 (MQ=255) gagacagcTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGAt < 1:2962990/133‑1 (MQ=255) aCAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTACAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGAt < 1:5422712/140‑1 (MQ=255) aCCACTCGGTTAGGTGTGCCGCTTACTGTCGTTTTTACTTCTTCGTGCTGGATCACGCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTTTTCTGGCTGGATGAAAAGCCGGATAAAAAGAAAAAAGCGATtaa > 2:2755286/1‑140 (MQ=255) ccACTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTACATCATCGTGCAGGATAAATCTACAAAACGTACACATTCTTTCGATACGTACCCTGTTAATGTGGCAGGATGAACATCCGGTAACAAAGTAAAACGCCATtaat > 2:325327/1‑140 (MQ=255) cACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATtaata < 2:2156700/140‑1 (MQ=255) cACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATtaata < 1:4567167/140‑1 (MQ=255) cTCGTTTAGGTGTGCCGCTTACTGTCGTGTTTCCTTCTTCGTTGAGGATCACTCGAGAATCCTTAGAATTGCTTTCGCTGCGTGCGCGGTTATTATTGCTGGATGAACCCCCGGATACAAAGAAACAGGCGATTaaaaaa > 2:2241585/1‑140 (MQ=255) gTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGa > 2:4711981/1‑112 (MQ=255) gTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAaca < 2:574286/140‑1 (MQ=255) gTTTAGGTGTGCCGCTGACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAaca < 1:641294/140‑1 (MQ=255) gCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAg < 1:1625536/140‑1 (MQ=255) ccGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTAGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACACATGATAGc > 2:5461360/1‑140 (MQ=255) ccGCTTACTGTCGTTTTTCCTTCTTCGGGCTGGTTGACGCTAGAAACCTTAGACTTTCTTTCGCTGCTTACGCTGTTATTCTGGCTGGATGAACATCCGGATACAAATAAAAAGGCGATTAATAAAACACTCATTATAga > 2:2702501/1‑139 (MQ=255) ccGCTTACTGTCGTTTTTCCTTCGTCGTGCTGGCTCACTCTAGAATACGTAGACTTGCTTTCGCGGCTTCCGCTGTTATTCTGGCTGGATGAAAAGCCGGATAAAATGAAAAAGGCGATTAATAAAAAACTCAATATAGc > 2:2482803/1‑140 (MQ=255) ccGCTTACTGTCGTTTTTCCTTCGTCGTGCTGGATCACTCTAGAATACTTAGACATGCTTTCCCTGCCACCCCTGTTATTATGGCTGGATGAACAGCCGCATACAAAGAAACAGGCGAAGAAAAAAACACTCATGATacc > 2:5573438/1‑138 (MQ=255) ccGCTTACTGTCGTTTTTCCATCTTGGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCCCGGCTTCCGCTGTTATTATGGCTGGCAGAACACCCCGATACAATGAAACAGGGGATTAAGAAAACACGAGTGATAGc > 2:4673648/1‑140 (MQ=255) ccGCTTACTGTCGTTTTTACATATTCGTGCTGGCTCACTCAATAAACCATAGACTTGCTTTAGCTGCGTCCCCAGTTATTGTGGCTGGATGAAAACCCCGATAAAATGAAAAAGGCGATTAAAAAAAAACACATGATAGc > 2:1017900/1‑140 (MQ=255) cGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCa < 2:295136/140‑1 (MQ=255) cGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGt < 1:2530586/140‑1 (MQ=255) tCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAAt < 2:2030329/140‑1 (MQ=255) cttcttCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAg < 2:3448602/140‑1 (MQ=255) gTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCa < 1:4356301/140‑1 (MQ=255) gATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCAt > 1:2196012/1‑140 (MQ=255) ctctAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTgcg > 1:1002263/1‑127 (MQ=255) tctAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTcc > 2:288301/1‑140 (MQ=255) gAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGAGCATGTCATTCTTCCtttt > 2:3911436/1‑140 (MQ=255) tCCTTAGACTTGCTTTCTCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTc < 2:169527/140‑1 (MQ=255) tCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTc > 1:4987677/1‑140 (MQ=255) tCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTc < 2:1238206/140‑1 (MQ=255) tCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTc < 1:4272902/140‑1 (MQ=255) cTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTACtttttaaaa > 2:134763/1‑136 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGc < 1:4062026/49‑1 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAgt > 1:3894936/1‑139 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAg < 2:5394705/139‑1 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa < 2:3337416/140‑1 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 2:2991984/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 2:728010/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 2:813261/1‑140 (MQ=255) ttAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGa > 2:1439491/1‑140 (MQ=255) aGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAAGAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGt < 2:654358/101‑1 (MQ=255) aGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGAtt < 1:288301/140‑1 (MQ=255) gCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTaa > 2:608396/1‑140 (MQ=255) gCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTaa > 2:4630352/1‑140 (MQ=255) gCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTaa > 2:4562487/1‑140 (MQ=255) gCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTaa > 1:3333730/1‑140 (MQ=255) cTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATATCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTAAGATTTAGTAAt > 2:3946553/1‑140 (MQ=255) cTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAAt > 2:4478912/1‑140 (MQ=255) tCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATgag < 1:1914455/140‑1 (MQ=255) tCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATgag < 1:4477106/140‑1 (MQ=255) cGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACATGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATgaga < 1:1967953/140‑1 (MQ=255) cGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATgaga < 2:5776757/140‑1 (MQ=255) cGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATgaga < 1:4769729/140‑1 (MQ=255) gctgctTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGaa < 2:3547547/140‑1 (MQ=255) gctgctTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCGTCCTTTTTTCAGATTTAGTAATGAGaa < 2:4218909/140‑1 (MQ=255) ctTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTACAGATTTAGTAATGAGAATCAt < 2:1800194/140‑1 (MQ=255) ccGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTAt < 1:1791616/140‑1 (MQ=255) cTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGAATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATcac > 2:2403921/1‑140 (MQ=255) tATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGt > 1:1087641/1‑140 (MQ=255) aTTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTa < 1:5727881/140‑1 (MQ=255) aTTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTa < 1:1548690/140‑1 (MQ=255) aTTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTa < 1:1847615/140‑1 (MQ=255) aTTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTa < 1:3600971/140‑1 (MQ=255) tCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTaaa < 1:2641606/140‑1 (MQ=255) tCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTaaa < 1:522010/140‑1 (MQ=255) tCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTaaa < 1:2755286/140‑1 (MQ=255) tCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTaaa < 1:4501125/140‑1 (MQ=255) tCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTaaa < 1:1338841/140‑1 (MQ=255) tCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTaaa < 1:813261/140‑1 (MQ=255) tCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTaaa < 2:1092048/140‑1 (MQ=255) tCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTaaa < 1:1187777/140‑1 (MQ=255) tggctggATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTAAaca < 1:2256462/140‑1 (MQ=255) tggctggATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTAAaca < 1:3101119/140‑1 (MQ=255) tggctggATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTAAaca < 1:2702501/140‑1 (MQ=255) tggctggATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTAAaca < 1:1473568/140‑1 (MQ=255) tggctggATGAACAGCCGGATACAATGAAACAGGAGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTAAaca < 2:4938937/140‑1 (MQ=255) ggctggATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTAAacac > 1:3976033/1‑140 (MQ=255) | AGATTGTATACAGCATCCAAGAATGAAAGCTCAAGGACAACCACTCGTTTAGGTGTGCCGCTTACTGTCGTTTTTCCTTCTTCGTGCTGGATCACTCTAGAATCCTTAGACTTGCTTTCGCTGCTTCCGCTGTTATTCTGGCTGGATGAACAGCCGGATACAATGAAACAGGCGATTAATAAAACACTCATGATAGCAATCAACTTGTTAGAATAGGTGCGCATGTCATTCTTCCTTTTTTCAGATTTAGTAATGAGAATCATTATCACATGTAAACAC > NZ_CP034943/803139‑803417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |