| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 934,369 | G→T | 7.1% | A340S (GCA→TCA) | ssuD → | FMNH2‑dependent alkanesulfonate monooxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 934,369 | 0 | G | T | 7.1% | 943.2 / 15.9 | 369 | A340S (GCA→TCA) | ssuD | FMNH2‑dependent alkanesulfonate monooxygenase |
| Reads supporting (aligned to +/- strand): ref base G (196/134); new base T (36/2); total (232/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 371 total aligned reads displayed.
TGGTCAGGGGCGGGGCAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAGCCCCCGAAC > NZ_CP034943/934232‑934508 | tGGTCAGGGGCGGGGCAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACAGTTAGAAGAAGCGTATTATTTTGCa < 2:2808780/140‑1 (MQ=255) ggTCAGGGGCGGGGCAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGACTCGTTTATATTCTCTGGATATCCACCTTTAGATGAATCGGATTATTTTTCat > 1:5241598/1‑139 (MQ=255) gTCAGGGGCGGGGCAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACAGTTAGAAGAAGCGTATTATTTTTCaga > 1:2941785/1‑140 (MQ=255) gTCAGGGGCGGGGCAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTGTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCaga > 1:108051/1‑140 (MQ=255) ggggcggggcAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCtt < 2:5615269/140‑1 (MQ=255) gggcggggcAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTCGAAGACTCGGATTATTTTGCAGAGCTtg > 2:3184357/1‑140 (MQ=255) gggcggggcAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTtg > 2:1889547/1‑140 (MQ=255) gggcCGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGGTTGTATTCTCTGGATATCCCCATTTATCAGTAGCGGATTATTTTGCAGAGCTTGTGttt > 1:3727644/1‑140 (MQ=255) gggcAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATGGTTTATATTCTATTGATATACAAATTTAGAATAAGCGTATTATTTTGCAGAGCTTGTtttt > 1:5637892/1‑140 (MQ=255) gggcAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTTTGttt > 2:1796135/1‑140 (MQ=255) gggcAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGttt > 2:1407556/1‑140 (MQ=255) gggcAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGttt > 2:2522897/1‑140 (MQ=255) gggcAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTGTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGttt > 2:642970/1‑140 (MQ=255) ggAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCa > 1:4579293/1‑123 (MQ=255) ggAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCt > 2:1117887/1‑140 (MQ=255) ggAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCt > 2:4752272/1‑140 (MQ=255) ggAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATACACATTTAGTAGAAGCGTATTATTTTTCAGAGCTTGTGTTTACGCt > 1:3577669/1‑140 (MQ=255) ggAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATACAAATTTAGAAGAAGCGTATTATTTTGCAGAGATTTTGTTTCAGCt > 2:2105200/1‑140 (MQ=255) ggAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCAGGATAACCACATTTAGAACAAGCGGATTATTTTGCAGACCTATTGTTTACGCt > 1:3811871/1‑140 (MQ=255) aaCAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCAACATTTAGAAGAAGCGTATTATTTTGCAGAGATTGTGTTTCCGCttt > 2:875353/1‑140 (MQ=255) gCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGGACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTATAACACCCGTACTATTTTCCAGAGCTTGTGGGTCCGCTATTGcc < 2:352646/140‑1 (MQ=255) ctctTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGTGCTTGTGTTTCCGCTTTTGCCg > 2:2628339/1‑140 (MQ=255) gTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGa > 2:2370170/1‑140 (MQ=255) gTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTGTCTATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGGTTGa > 2:2263859/1‑140 (MQ=255) tGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATg > 2:2971347/1‑140 (MQ=255) tGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATg > 2:760309/1‑140 (MQ=255) tCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGc < 2:1081851/140‑1 (MQ=255) cGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTTCCGTTTGAAAATGAGCgg > 2:1023983/1‑140 (MQ=255) cGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCgg > 2:3823517/1‑140 (MQ=255) ttGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTGCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAg > 1:5101756/1‑140 (MQ=255) aCCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAg < 1:4231984/140‑1 (MQ=255) ggATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAAc < 1:3313591/140‑1 (MQ=255) aTAGCTGAGTACCATGAACTCGGCATAGAATCTTTTATATTATCTTGATCTACACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTTTTTCCGCTTTTTCCGTTTGAAAATGAGCGGACGTGAAAGCTTCAGAACaa < 2:3757347/140‑1 (MQ=255) aTAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACaa < 2:381546/140‑1 (MQ=255) tAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACaaa < 1:2370170/140‑1 (MQ=255) aGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGga > 1:4156509/1‑140 (MQ=255) tACCAGGCACTCGGCATAGAATCGTTTATATTCTGTGGATATCCACATTTAGAATAAGCGTATTATTTTTCAGAGCTTTGGTTTCCGCTTTTGCCGGTTGAAAATGAGCGGCCCAGAAAGCTTCAGAACAAAAGGGgaga > 1:3109093/1‑140 (MQ=255) tACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGgaga > 2:2027455/1‑140 (MQ=255) tACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGACGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGgaga > 2:1502910/1‑140 (MQ=255) tACCAGGCACTCGGCATAGAATCGTGTATATTCTCTGGATATCCACATTTAGAAGAAGGGTATTATTTTGCCGTGCTTTTGTTTCCGCTTTTGCCGGTTGAAAATGAGCGGCCGAGAAAGCGTCAGAACAAAACTGgaga > 1:3422407/1‑140 (MQ=255) aCCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGATTCAGAACAAAAGGGGAGaa > 2:3707285/1‑140 (MQ=255) ggCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTATAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCg > 1:3865404/1‑140 (MQ=255) tCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCggg < 2:5110219/140‑1 (MQ=255) tCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCggg < 1:1532296/140‑1 (MQ=255) tCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCggg < 2:5656380/140‑1 (MQ=255) tCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCggg < 2:2195863/140‑1 (MQ=255) tCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCggg > 2:482879/1‑140 (MQ=255) tCGGCATAGAATCGTTTATATTCTCTGGATATACACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCggg > 1:3822055/1‑140 (MQ=255) tCGGCATAGAATCGTTTATATTATCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCggg > 2:1754242/1‑140 (MQ=255) tCGGCATAGAATCGTTTATAGTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCggg < 2:5301854/140‑1 (MQ=255) ggCATAGAATCGTGTATATTCTCTGGATATCCACAGTTAGAAGAAGCGGATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGAAGAGAAACCTTAAGAAAAAAAGGGGAGAAGCAGTCGGGaa > 2:4640980/1‑140 (MQ=255) aTCGTGTATATTCTCTGGATATCCACAATTAGAAGAAGGGTATTATTTTTCAGAGCTTGTGTTTACGCTTTTGCCGTTTTAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTAtt > 1:4787772/1‑140 (MQ=255) gTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTTCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTGCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTg > 1:5552164/1‑140 (MQ=255) tttATATTCTCTGGATATCCACATTTAGAAGAAGCGTAATATTTTTCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAAAGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGt > 1:5776897/1‑140 (MQ=255) tctcTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAagag > 2:4298591/1‑140 (MQ=255) tctGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGaa > 1:2668273/1‑140 (MQ=255) ctGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGATTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCTGACGAGAAAGCTTCAGAACACAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGaaa > 2:4548918/1‑140 (MQ=255) tGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGaaaa > 1:756799/1‑140 (MQ=255) atCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCg < 1:142672/140‑1 (MQ=255) atCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCg < 2:4938275/140‑1 (MQ=255) atCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCg < 2:1281586/140‑1 (MQ=255) atCCACATGTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGGTTCCGCTATTGCGGTTTGATAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATATTGTCAAAGAGAACAATGCg < 1:1657092/140‑1 (MQ=255) tCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGt < 1:482879/140‑1 (MQ=255) tCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGt < 1:489378/140‑1 (MQ=255) tCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGt < 2:5270831/140‑1 (MQ=255) tCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGt < 1:920047/140‑1 (MQ=255) ccACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAATAGGGGAGAAGCCGTCGGGACCACTTATTTTGTCAAAGAGAAAAATGCGTc > 2:3594929/1‑140 (MQ=255) cacaTTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCa > 1:399137/1‑140 (MQ=255) caTTTAGAAGAAGCTTATTATTTTGCCGAGCTTGTGTTTCCTCTTTTGCCGTTTGAATATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTGGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGt < 2:162652/140‑1 (MQ=255) caTTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGt < 1:1192359/140‑1 (MQ=255) caTTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGt > 1:2918537/1‑140 (MQ=255) caTTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGt < 1:2273611/140‑1 (MQ=255) tttAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGttt < 1:4278029/140‑1 (MQ=255) tttAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGttt < 1:2543013/140‑1 (MQ=255) aagaagCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGttt < 2:2138479/135‑1 (MQ=255) aagaagCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTa > 1:5044160/1‑140 (MQ=255) aagCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGACCAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTaaaa < 2:2912152/140‑1 (MQ=255) aagCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGTGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTaaaa > 2:4011262/1‑140 (MQ=255) agCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCggg > 1:2146022/1‑94 (MQ=255) agCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAac > 2:58747/1‑140 (MQ=255) agCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTGC‑GGACAAAATGGGAGGAGCCCTCGGGAACAAATATTTTTTGCAAGATAAAAAATCGTCAGTTTAAGTAAAaca > 1:5700823/1‑140 (MQ=255) gCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGt < 2:4219197/124‑1 (MQ=255) cGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAacac < 2:4156509/140‑1 (MQ=255) cGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAacac > 2:4409367/1‑140 (MQ=255) cGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAacac < 1:247343/140‑1 (MQ=255) cGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAacac > 1:4070533/1‑140 (MQ=255) cGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAacac > 1:2513824/1‑140 (MQ=255) cGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAacac > 1:5463523/1‑140 (MQ=255) cGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAacac < 1:5351777/140‑1 (MQ=255) cGTATTATTTTGCAGAGCTTGTGTGTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAacac < 2:5710118/140‑1 (MQ=255) tattatTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAg > 1:1826452/1‑140 (MQ=255) tattatTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCGTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAg > 1:284696/1‑140 (MQ=255) tattTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAGccc < 1:4409367/140‑1 (MQ=255) attTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAGcccc < 2:1940997/140‑1 (MQ=255) ttttGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAGccccc > 2:3395525/1‑140 (MQ=255) tGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAATTGAGCGGACGAGAAAGCTTCAGACCAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACAAAGCCCCCGaa > 1:1937360/1‑140 (MQ=255) tGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAGCCCCCGaa < 2:5357400/140‑1 (MQ=255) tGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAGCCCCCGaa < 2:2671851/140‑1 (MQ=255) tGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAGCCCCCGaa < 1:2120440/140‑1 (MQ=255) tGCAGAGCTTGTGTTCCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAGCCCCCGaa > 1:1595424/1‑140 (MQ=255) | TGGTCAGGGGCGGGGCAGGAACAGCTCTTGTCGGTGATCCGAAGACTATTGCCGACCGGATAGCGGAGTACCAGGCACTCGGCATAGAATCGTTTATATTCTCTGGATATCCACATTTAGAAGAAGCGTATTATTTTGCAGAGCTTGTGTTTCCGCTTTTGCCGTTTGAAAATGAGCGGACGAGAAAGCTTCAGAACAAAAGGGGAGAAGCCGTCGGGAACACTTATTTTGTCAAAGAGAAAAATGCGTCAGTTTAAGTAAAACACAGCCCCCGAAC > NZ_CP034943/934232‑934508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |