| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,730,084 | G→C | 17.7% | D169H (GAT→CAT) | rodZ → | cell shape determination protein RodZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,730,084 | 0 | G | C | 17.7% | 237.1 / 7.3 | 121 | D169H (GAT→CAT) | rodZ | cell shape determination protein RodZ |
| Reads supporting (aligned to +/- strand): ref base G (58/30); new base C (2/20); total (60/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.33e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
AATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATT > NZ_CP034943/1729949‑1730218 | aaTGCAGCAGCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACTCTAAAATATAATCAAAGCAAAAGCTCTGAAAAAGAGGCAGAAACTAAAAAAGAAACGAAAGAAAAAGAAGAGaa > 1:1785994/1‑140 (MQ=255) ccGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTCAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATaaaaaa > 2:3393519/1‑140 (MQ=255) gCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGACACGAAAGAACAAGAAGATAAAAaaga > 2:1601108/1‑140 (MQ=255) gCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaaga > 2:3989886/1‑140 (MQ=255) gCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaaga > 2:2867967/1‑140 (MQ=255) cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa > 2:1059813/1‑140 (MQ=255) aaaTCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAACAAGAAAGCGa > 2:448113/1‑140 (MQ=255) aaTTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTg > 1:4439102/1‑140 (MQ=255) aaTTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTg > 1:2738529/1‑140 (MQ=255) caaaGAACGAAATCCCAAAAGATAAAACGCAAAAACAAAACAAAACCAACCGCTCTGAAAAAGTGCCAGACACAAAAAACCAAACCAAACAAAAACAACAAAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTaaa < 1:237196/138‑1 (MQ=255) acAATTACTAAATCCAAAAATCTTCAACGCTAAAAGACAATAAAAGCAACAGCTATTAAAAAGAGGCATACACTAAAAAATAAAACAAAGAAAAACACTATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTaaa < 2:5527826/139‑1 (MQ=255) aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCa > 2:5493047/1‑140 (MQ=255) aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCa > 1:4723827/1‑140 (MQ=255) aGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTCATAAACTGGAGATTAAAGCa > 2:4253835/1‑140 (MQ=255) tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc > 2:736888/1‑140 (MQ=255) ctaaaTCCCAAAAGATTCAACGCTAAAAGAGAATAAAAGAAACAGCTCTGAAAAAGAGGCAGACACTAAAAAATAAACTAAACAAAAAGAAGATAAAAAACACGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTg < 2:2738529/138‑1 (MQ=255) ctaaaTCACAAAAGATTAAACGCTAAAAGATAATAAAAGCAACAGCTCTTAAAAAGAGGCAGACACTAAAAAAGAAACCAAATAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg < 2:4439102/138‑1 (MQ=255) ctaaaTCAAAAAATATACAACGATAAAATACAAAAAAAGAAACATAGCTTAAAAATAGGCATAAACTAAAACAGAAACTAAACACAAACAACATAAAAACCACCAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg < 2:2955966/138‑1 (MQ=255) cGAAATCCAAAAATATCCAAGGCTAAAAGACAATAAAAGAACCAGATCTGAAAATGAGGAATACACTAAAAAATAAACGAAAGAAAAACACGTTAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg < 2:377077/140‑1 (MQ=255) aaaTCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACATCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAACGCGAAAGTGATAAACTGGAGATTAAAGCAACTGGc < 2:2862153/140‑1 (MQ=255) aaaGCCCAAACTATTCAACGCTAAAACAGAAACAACGAAACAGCTGTCAAAAAGAGGCACAAAATAAAAAACAAACCACACAAAAACAACATAAACACCAACAACGCGACAGGGATAAACTGGAGATTAAAGCAACTGGc < 1:1345363/140‑1 (MQ=255) tCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAATAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACt > 1:197759/1‑140 (MQ=255) tCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACt > 1:1605662/1‑140 (MQ=255) cAAAAGATCCAACGCTAAAAGAGAATAAAAGCAACAGATCTGAAAAAGAGGAACACACTAAAAAAGAAACCAAAGAAAAAGAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa < 2:1830149/140‑1 (MQ=255) cAAAAGATACAACGCTAAAACAGAATCAAACCAACAGCTCTCAAAAACAGGCAGACACTAAAAAATAAACCAAACAAAAACAACATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGaa < 2:1753993/140‑1 (MQ=255) ttCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAt > 2:4077343/1‑140 (MQ=255) ttCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAt > 2:865700/1‑140 (MQ=255) ttCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAt > 2:1160147/1‑140 (MQ=255) ttCAACGATAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGAGATAAACTGGAGATTAAAGCAAATCGCACTGAAGCGTCAt > 2:1007574/1‑140 (MQ=255) cctatAAAACAGAAACAAAGCAACAGCTCTAAAAAAGAGGAATACACTAAAAAAGAAACCAAACAAAACTAACATAAAAACTACCAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 1:3109186/136‑1 (MQ=255) acgacaaaaCAGAAACAACGCAACAGCTCTCAAAAAGAGGCAGACACTAAAAAACACACCAACCAAACACAAGATAAAAACCACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 1:5384922/135‑1 (MQ=255) accatAAAACAAAATCAAAGAAACAGCTATCAAAAAGAGCCAGACAATAAAAAACAACCCAAACAAAAACAATATAAAAAACACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 1:1682600/136‑1 (MQ=255) aCGCTAACAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACCAAACAAAAAGAAGATAAAAACGAAGCAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 2:1433266/140‑1 (MQ=255) aCGCTAAAAGATAATAAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 2:3700290/140‑1 (MQ=255) aCGCTAAAAGAGAATAAACGCAAACGCTCTCAAAAATCGGCAGACACTAAAAAAGAAACGAAACAAAAAGACCATAAAAACCAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 1:2570826/140‑1 (MQ=255) aCGCAAAAAGACAATCAACCAAACAGCACGTAAAAACAGGCACACACTAAAAAACAACCCAACGAAAAACAACAGAAAACAGAACCACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 1:1059813/140‑1 (MQ=255) aCGCAAAAACACAAACAAACCAACAGCTCTTAAAAACAGCAATAACCTAAAAAACAAACCAAAAAAAACCAACAAAAAAAACAACAACGCGCCAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 1:5383959/140‑1 (MQ=255) aCGATAAAAGAGAATCAAAGCAACAGCTCTTAAAAAGAGGCAGACACTAAAAAAGAAACTAAAGAAAAAGAAGATAAAAAAGCCGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 2:5775999/140‑1 (MQ=255) aCGATAAAAGAGAATAAAAGAAACAGCTCTTAAAAAGAGGCACACACTAAAAAACAAACCAAACAAAACGAACATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc < 1:4217651/140‑1 (MQ=255) gatAAAATACAATCAAACAAACAGCTATTAAAAAGAGGAAGACACTAAAAAATAAACGAAACAAAAAGAACATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGa < 2:603917/138‑1 (MQ=255) atAAAAGATAATAAAAGCAACAGCTCTGAAAAAGAGGCAGACAATAAAAAAGAAACGAAAGAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGAc < 2:3526311/139‑1 (MQ=255) tAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACt > 2:2233411/1‑140 (MQ=255) aaaaGATAATAAAACAAACATCTCTTAAAAATTGCAACAAAATAAAAAATAAACCAAAAAAAAATAATAAAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACtt < 1:5356574/140‑1 (MQ=255) acaaTCAAACCAACACCTCTCAAAAAGAGCCCCACACTAAAAAAGAAACCACCCAACACCACCAGAAAAACCAAGAACGCGACAGAGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa < 1:3742299/138‑1 (MQ=255) aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt > 1:4916343/1‑140 (MQ=255) tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt > 1:5280044/1‑140 (MQ=255) tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt > 1:4493626/1‑140 (MQ=255) tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt > 1:4246255/1‑140 (MQ=255) tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt > 1:1260226/1‑140 (MQ=255) tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGAGAAAAAAGAAGAAAGCGACAGTGATCAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt > 1:4161839/1‑140 (MQ=255) aGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCgg > 2:888846/1‑140 (MQ=255) aCAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCt > 1:221143/1‑140 (MQ=255) gCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTgag > 2:2500207/1‑140 (MQ=255) gCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTgag > 2:4633034/1‑140 (MQ=255) gCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAACAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTTGCACTGAATGGTCATTAACGACTTAAGACTTGTCAGGCGCTgat > 2:4355100/1‑139 (MQ=255) ctctGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTgaga > 1:620942/1‑140 (MQ=255) ctGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGaaa > 2:2539384/1‑140 (MQ=255) ctGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGaaa > 1:539177/1‑140 (MQ=255) ctGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGaaa > 2:1652371/1‑140 (MQ=255) aaaaaGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTc > 1:3240323/1‑140 (MQ=255) aaaaaGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTc > 1:326033/1‑140 (MQ=255) gCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGa > 1:640795/1‑140 (MQ=255) gCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGa > 1:2714765/1‑140 (MQ=255) gCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGa > 1:423963/1‑140 (MQ=255) cAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGaa < 2:5606988/140‑1 (MQ=255) cAGACAATAAAAAACAAACGAAACAAAAACAACATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGaa < 2:4759601/140‑1 (MQ=255) aataaacTAAAAAATAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGaa < 2:3814259/135‑1 (MQ=255) ccatAAAAACCAACCCAAAAAAAAAGACCATAAAAAACACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa < 1:771197/137‑1 (MQ=255) cacaAAAAAAGAAACCAAATAAAAAGAAGATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa < 1:1371903/140‑1 (MQ=255) cacTAAAAAACAAACCAAAGAACAACAAGACAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa < 1:2600186/140‑1 (MQ=255) cacTAAAAAAAAAACCAAACAAAAATAAGATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa < 1:1968814/140‑1 (MQ=255) aacTAAAAAATAAACGAAAGAAAACGAACATAAAAAAGACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCAATGACGGGGCATTAACGACTTATGAAGTGTCCGGCGCTGAGACATTCGAGCTCGAACTGa < 2:4917975/139‑1 (MQ=255) aacTAAAAAAGAAACGAAATAAAAAGAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa < 2:1999683/139‑1 (MQ=255) aaatAAAAAACAACCGAAACAAAAACAATATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa < 1:1580966/137‑1 (MQ=255) aaatAAAAAACAAACTAAAGAAAAAGAAGATAAAAAAGACCAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa < 2:2158731/137‑1 (MQ=255) aaatAAAAAACAAACTAAAGAAAAACAAAATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa < 1:2860658/137‑1 (MQ=255) aaaaaaaaaaCAAACTAAACAAAAACAATATAAAAACCAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa < 1:2304656/136‑1 (MQ=255) cTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAg < 2:4208151/140‑1 (MQ=255) atAAAAAACAAACGAAACAAAAAGAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAg < 2:5285307/139‑1 (MQ=255) aaaaaTAAAATAAACAAAACGAACACAAAAAACAACCACGCGACAGTGATAAACGGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGATGAGAAATTCGAGCTCGAACTGAAGGCa < 1:5685975/140‑1 (MQ=255) aaaaaCAAAGGAAACAAAAAGAAGATACAAACCAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCa < 1:3888699/140‑1 (MQ=255) aaaaaCAAACCAAACAAAAACACCCTAAAAAAGAACACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCa < 1:4731560/140‑1 (MQ=255) taaaCCAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa < 1:2775727/139‑1 (MQ=255) caaaCGAAAGAAAAACAATATAAAAAATAATAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa < 2:2046709/139‑1 (MQ=255) caaaCCAAACAAAAATAACATAAAAAACACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa < 1:2220724/139‑1 (MQ=255) caaaCCAAACAAAAAGAAGATAAAAAACACCACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa < 1:930511/139‑1 (MQ=255) caaaCCAAACAAAAAGAACATAAAAAATAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa < 1:3989886/139‑1 (MQ=255) aaaCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGAc > 1:187873/1‑140 (MQ=255) aaCTAAATAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACa < 2:3644551/140‑1 (MQ=255) aaCTAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACa < 2:1190653/140‑1 (MQ=255) aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg > 1:1279463/1‑140 (MQ=255) aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg > 1:5578041/1‑140 (MQ=255) aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg > 1:2510281/1‑140 (MQ=255) aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg > 2:1781382/1‑140 (MQ=255) aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg > 1:3302421/1‑140 (MQ=255) aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg > 2:3344325/1‑140 (MQ=255) aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg > 1:3318098/1‑140 (MQ=255) aCGAAAGAAAAAGAACATAAAAAAGAATAAAGCGACATTGATAAACTGGAGATTAAAGCAACTGGCACTCAAGTGTCATTAACGACTTATCAAGTGTCAGGCGCTGAGAAATTCGAGATCGAACTGAAAGCATCAGACac > 2:3002141/1‑139 (MQ=255) aCGAAAGAAAAAGAACATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg > 2:836828/1‑140 (MQ=255) cagaagaTAAAAACGACGAACGCGACAGTGATAAACTGGAGAGTAAAGCAACGGGCACTGAAGGGTCATTAACGACTTATGAAGTGGCCGGCGCTGAGAACTTCGAGCTCGAACTGAAGGCATCAGACAGTTATTGGAtt < 2:2502339/139‑1 (MQ=255) | AATGCCGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATT > NZ_CP034943/1729949‑1730218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |